Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 3e-13 >seq8 Length=28014461 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | ||||| | || | || || || | ||| || ||| || ||||| | | Sbjct 24290998 CCACCACGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT 24290939 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || | || |||| || | || || ||||| ||||| | || ||| ||||| || || Sbjct 24290938 AAGGCGCGGCCATCCTCGAGCTGCTTGCCAGCCAAGATCAGTCGCTGCTGATCCGGGGGA 24290879 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 || || || || || || || || |||||| || || | |||||||| || || Sbjct 24290878 ATGCCCTCCTTGTCCTGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACC 24290819 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || || ||||||||||| || || ||||| || | ||| || |||||| Sbjct 24290818 TCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 24290771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479848636200