Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq9 230 3e-54 seq1 141 1e-27 seq8 138 1e-26 seq11 120 4e-21 seq3 109 7e-18 seq12 105 8e-17 seq7 102 1e-15 seq10 93.3 5e-13 seq6 93.3 5e-13 >seq9 Length=29411429 Score = 230 bits (254), Expect = 3e-54 Identities = 248/322 (77%), Gaps = 5/322 (2%) Strand=Plus/Minus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||| ||||| |||||| |||||| |||||||||||||||| || ||||| Sbjct 1287152 CGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGAT 1287093 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||||||| ||||||||||| || | ||||| ||| | ||| ||||||| | Sbjct 1287092 GAGCTCCATCCAGTCGAACGGGTTGG-CGACGTTGTACATCTTCTTGCACCCGAGCGCCA 1287034 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||||| ||||||||||| |||||||||||||||| |||||| || ||||||| |||| Sbjct 1287033 TGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGCCGTTCATCCCGA 1286974 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| || || |||| |||| || ||||| ||||||| || ||||| ||| ||| Sbjct 1286973 CGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACGGCGTCGGCGA 1286914 Query 868929 TGATCTGCCTGGGCACGTCGGCCG-AGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 ||||| ||||| | ||| || | ||||| | ||| | |||||| |||||| Sbjct 1286913 CGATCT-CCTGGACGCGTGACTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAGGAGGCAG 1286855 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 || ||||||||||| | ||||| Sbjct 1286854 GCGAAGTCGCAGTGGAGACCCT 1286833 Score = 228 bits (252), Expect = 1e-53 Identities = 249/323 (77%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| |||||| ||| ||||| |||||| |||||| |||||||||||||||| || Sbjct 8530415 GACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAG 8530474 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGA 868802 || || | ||||||||| ||| ||||| |||| | ||||| ||| | ||| |||| Sbjct 8530475 GGATATGAGCTCCATCCAGTCGAAGGGGTT-GGCGACGTTGTACATCTTCTTGCAGCCGA 8530533 Query 868803 GCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCA 868862 ||| | ||| |||||||||||||| |||||||||||||||| ||||||| || |||||| Sbjct 8530534 GCGCCATGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCA 8530593 Query 868863 TGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCT 868922 |||||| |||||| || || |||| |||| || ||||| ||||||| |||||||| | Sbjct 8530594 TGCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGT 8530653 Query 868923 CGACGATGATCTGCCTGGGCACGTCGGC-CG-AGGGCTTGTTGACGAGCATCGTGTAGAG 868980 || ||| ||||| | || | || || | || | ||||| | ||| | |||||| Sbjct 8530654 CGGCGACGATCT-CGCGGACGCG-CGCCTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAG 8530711 Query 868981 CAGGCAGGCAAAGTCGCAGTGCA 869003 |||||||| ||||||||||||| Sbjct 8530712 GAGGCAGGCGAAGTCGCAGTGCA 8530734 Score = 219 bits (242), Expect = 5e-51 Identities = 215/275 (78%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||| ||||| ||||| | | |||| || || || Sbjct 8531016 GAGTGGATGTTCTCGATGGCGATCTGGAATCCGTAGAAGGCGCGCGCCTCGGCGACCTGC 8531075 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| | ||| ||||||||| ||||||||||||| ||||||||| Sbjct 8531076 ACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGAAG 8531135 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCG--CTGAGCGAC-ACCCAGTGG 869809 || || || ||||| ||| ||||||||||||||| | | | ||| | |||||||| Sbjct 8531136 AAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGACAGCGCGGCGTCCCAGTGG 8531195 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| ||| Sbjct 8531196 CGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCTTG 8531255 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 || | |||||| | ||| |||| | ||| ||||| Sbjct 8531256 TAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 8531290 Score = 210 bits (232), Expect = 3e-48 Identities = 215/277 (78%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||||| | |||| || || | Sbjct 1286559 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGCGACCT 1286500 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||||||| | ||| ||||||||| ||||||||| ||| ||| |||| Sbjct 1286499 GCACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCATCGGAGGCCGCGA 1286440 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC-GTCG-CTGAGCGAC-ACCCAGT 869807 | || || || ||||| || |||||||||||||| | || | | ||| | |||||| Sbjct 1286439 AGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGGCGACAGCGCGGCGTCCCAGT 1286380 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 || | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| | Sbjct 1286379 GGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCT 1286320 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||| | |||||| | ||| |||| | ||| ||||| Sbjct 1286319 TGTAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 1286283 Score = 197 bits (218), Expect = 2e-44 Identities = 215/286 (75%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | |||||| |||| |||||| |||||||| |||||||| Sbjct 1286837 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTT 1286778 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| |||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 1286777 CTTGAGCCAGAAGATGGCGCAGAATGAACCCGAGAAGAAGATCCCCTCGACGCAGGCGAA 1286718 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | ||| |||||||||||| ||| ||| ||| || |||||| ||| ||||| Sbjct 1286717 GGCGACGAGCCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCATCGCATGGCCCA 1286664 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||||||||| | ||| | || || |||||||||||||| |||||| ||||||| || Sbjct 1286663 GTCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTC 1286604 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | ||| || || || |||| ||| ||||| || ||||| Sbjct 1286603 GACGTCGTCGCGGATGTACGTCTCGAGCAGAAGCGAGTACATCTCC 1286558 Score = 194 bits (214), Expect = 2e-43 Identities = 213/284 (75%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| |||||||| || |||||| Sbjct 8530737 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTC 8530796 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| ||| Sbjct 8530797 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 8530856 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| |||||||| ||| ||| ||| || |||||| ||| |||||| Sbjct 8530857 GCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAG 8530910 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | ||| | ||| || |||||||||||||| || || ||||||| ||| Sbjct 8530911 TCGGCCTTGCGGCGCACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCGGTCCTTCTCG 8530970 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||| || ||||| |||| ||| ||||| || |||| Sbjct 8530971 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTC 8531014 >seq1 Length=42845077 Score = 141 bits (156), Expect = 1e-27 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2775598 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2775539 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 2775538 TGGTGGGCTTCTTGTTGTAGCGGGCTAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2775479 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2775478 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2775419 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2775418 GGACCTGCTTGAGCACCTTGAAGATG 2775393 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| ||||||||||||||||| || | | || Sbjct 2743508 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGA 2743567 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | ||| ||| | ||| |||| | Sbjct 2743568 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2743627 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2743628 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2743687 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2743688 GGACCTGCTTGAGCACCTTGAAGATG 2743713 Score = 127 bits (140), Expect = 2e-23 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 15750023 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 15750082 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| || | || || ||| ||||||| ||| ||| |||| Sbjct 15750083 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTC-CTGCGCGAGCTTCTCGAAG 15750141 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || |||||||||| |||||| | |||| |||||| || | ||| ||| Sbjct 15750142 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATTCCGATGTCCGGG 15750201 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 || |||||||| || |||||| ||||| Sbjct 15750202 TGTACCTGCTTCAGGACCTTGAAGATG 15750228 Score = 125 bits (138), Expect = 9e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2750219 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 2750278 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2750279 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2750338 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2750339 TGTCGTTGATGAAGGAGTTCATGATNGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2750398 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2750399 GGACCTGCTTGAGCACCTTGAAGATG 2750424 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2545417 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2545358 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2545357 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2545298 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | ||||||| Sbjct 2545297 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATATCGGGGT 2545238 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2545237 GGACCTGCTTGAGCACCTTGAAGATG 2545212 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||| | | | || ||||| |||||||||||||||||||| | | || Sbjct 2708079 GCTTGGCGAGCTCGCTGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGA 2708138 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2708139 TGGTGGGTTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2708198 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| || |||||||||| |||||| | |||| ||||||||| | |||||||| Sbjct 2708199 TATCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2708258 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||| ||||| Sbjct 2708259 GGACCTGCTTCAGCACCTTGAAGATG 2708284 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| ||||||||||||||||| || | | || Sbjct 2763229 GCTTGGCAAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGA 2763288 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2763289 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2763348 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| ||||||||| | |||||||| Sbjct 2763349 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTCGAGGAGATGCCGATGTCGGGGT 2763408 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2763409 GGACCTGCTTGAGCACCTTGAAGATG 2763434 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || |||||||| | ||||||||||||||| | | || Sbjct 35320536 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGA 35320595 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || |||||| ||||||| | ||| |||| | Sbjct 35320596 TGGTCGGCTTCTTGTTGTAGCGGGCGAGACGGGCGGCCTCCTGGGCGAGCTTCTCGAAGA 35320655 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| ||||||||||||| |||||| | |||| ||||| || | ||||| | Sbjct 35320656 TATCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGACGAGATCCCGATATCGGGAT 35320715 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| |||||| | ||| Sbjct 35320716 GCACCTGCTTGAGGACCTTGAAAATG 35320741 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2558250 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 2558191 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2558190 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2558131 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2558130 TGTCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2558071 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2558070 GAACCTGCTTGAGCACCTTGAAGATG 2558045 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2685964 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGGGAGGTGA 2686023 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | | | ||| | ||| |||| | Sbjct 2686024 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCAGACTCCCCGGCGAGCTTCTCGAAGA 2686083 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2686084 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2686143 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| ||||||||| ||||| Sbjct 2686144 GGACCTGCTTCAGCACCTTGAAGATG 2686169 Score = 116 bits (128), Expect = 5e-20 Identities = 154/210 (73%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCG---TGC 1254399 || |||| || |||||| | | || |||| |||| ||||| ||||||||| | || Sbjct 15675679 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCAGACGGAGGTCTAGATCTCGCGGGAGGTGG 15675738 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCG 1254458 |||| | || |||||| || | || || || |||||| ||| ||| ||| Sbjct 15675739 CGATGGGCTT---CTTGTTGTAGCGGGCGAGGTGGGTGGCCTCC-TGCGCGAGCTTCTCG 15675794 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | |||||||||| || |||||||||| |||||| | |||| ||||||||| | ||| Sbjct 15675795 AAGATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCC 15675854 Query 1254519 GGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||| || |||||| ||||| Sbjct 15675855 GGGTGCACCTGCTTCAGGACCTTGAAGATG 15675884 Score = 89.7 bits (98), Expect = 6e-12 Identities = 95/123 (77%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486 |||||| ||| | || || | ||||| |||| |||| || ||||||||||||||||| Sbjct 27222464 GTCGGCCGCC--GCGC-TCACGTACCTCCACGCCATCGAGCCACCCATCGTGCACCGCGA 27222408 Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546 | |||||| | |||| | || ||||| ||| | |||||||||| ||||||||||| Sbjct 27222407 CGTCAAGACCACCAACATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTTGG 27222348 Query 1349547 CCT 1349549 ||| Sbjct 27222347 CCT 27222345 Score = 87.8 bits (96), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457 |||| |||||| | |||||| ||||||||||||||||||||||| ||||| | | Sbjct 20915844 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 20915785 Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493 ||| |||| || ||| |||||||||||||||||| Sbjct 20915784 CGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGACAAG 20915749 >seq8 Length=28014461 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 26748835 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 26748776 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 26748775 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 26748716 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 26748715 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 26748656 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||||||||||| |||||| ||||| Sbjct 26748655 GGACCTGCTTGAGAACCTTGAAGATG 26748630 Score = 100 bits (110), Expect = 3e-15 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || || || || | ||||||||||||||| | | || Sbjct 20492795 GCTTGGCAAGCTCGCCGGGGAGGACGAGACGAACAGAGGTCTGGATCTCGCGGGAGGTGA 20492736 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGG-TCGATC 1254461 | ||| |||||| | || || | | ||||||| ||| || |||| Sbjct 20492735 TTGTGGGCTTCTTGTTGTACCTGGCAAGCCTGGCGGCCTCC-TGCTTGAGCTTCTCGAAA 20492677 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || || ||||||| ||||| | |||| |||||| || | ||| || Sbjct 20492676 ATGTCGTTGATGAAGGAATTCATGATGGACATGGCCTTGGAGGAGATTCCTATGTCTGGA 20492617 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||||||||| ||||| Sbjct 20492616 TGCACCTGCTTGAGCACCTTGAAGATG 20492590 >seq11 Length=26703665 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| | | | || Sbjct 21983193 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGA 21983134 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | || || | |||||||| | ||| |||| | Sbjct 21983133 TGGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 21983074 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| ||||| | |||| |||||| || | ||| |||| Sbjct 21983073 TGTCGTTGATGAACGAGTTCATGATTGACATGGCCTTGGAGGAGATCCCGATGTCCGGGT 21983014 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||| ||||| Sbjct 21983013 GCACCTGCTTGAGCACCTTGAAGATG 21982988 >seq3 Length=24378308 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| ||||||||| |||||||| |||| || ||| ||| || |||| || || Sbjct 13646684 GCCGCGAACTACCTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGAC 13646743 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 13646744 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 13646798 >seq12 Length=20407407 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||| |||||||| ||||| ||||| ||| || | ||||| || Sbjct 19140759 GCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 19140700 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| Sbjct 19140699 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAG 19140649 >seq7 Length=28646061 Score = 102 bits (112), Expect = 1e-15 Identities = 125/168 (74%), Gaps = 7/168 (4%) Strand=Plus/Minus Query 1592131 GTGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187 ||||||| | || || ||||| | || ||| | ||||||| || | ||| || Sbjct 18984928 GTGGGACGAAGACTTCGTCGACGAGCTGGACCAGGACGCCCTCTTCGATGTCATCGCGGC 18984869 Query 1592188 CGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||||||| | ||||| ||||| || |||||| || ||| || Sbjct 18984868 CGCCAACTACCTCGACATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGAC 18984811 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||||| | |||||||||||||||||| || |||||| Sbjct 18984810 ACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 18984763 >seq10 Length=24717764 Score = 93.3 bits (102), Expect = 5e-13 Identities = 167/238 (70%), Gaps = 16/238 (7%) Strand=Plus/Minus Query 1349440 GGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCTCAAGAGCGGC 1349499 ||| |||||||||| |||| | | ||||||||| | || |||||||||||| ||| | Sbjct 3321011 GGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCATCGCGACCTCAAGTGCGAC 3320952 Query 1349500 AACCTGCTGGTCGACCAAAACTA---CAACGTCAAGGTGGCCGACTTTGGCCTGGCGCGC 1349556 ||| | | ||| || ||| | | | |||||| | | |||| | ||||| || ||| Sbjct 3320951 AACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGC-CGC 3320893 Query 1349557 ATTAAG--GAGGACAACGCCACGATGACCCGCTG---CGGCACGCCCTGCTGGACGGCGC 1349611 || | | || |||||| ||||||| ||||||||| | | ||| | Sbjct 3320892 GTTCCGCCGCGGCGGCGGCCACG----CCCGCTGCGTCGGCACGCCGGAGTTCATGGCTC 3320837 Query 1349612 CCGAGGTCATACGCGGCGAGCGCTACGACGAGCGGGCCGACGTCTACTCATTTGGCAT 1349669 ||||||| || || |||| ||||||||||| |||||||||||||| || ||||| Sbjct 3320836 CCGAGGT-GTA--CGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCAT 3320782 >seq6 Length=36134596 Score = 93.3 bits (102), Expect = 5e-13 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||| |||||||||||||| | |||||||| Sbjct 2520967 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 2520908 Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725 ||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| | Sbjct 2520907 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 2520849 Query 1347726 CACCG 1347730 | ||| Sbjct 2520848 CGCCG 2520844 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/130 (76%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCAC---GGTCTCGACCCGCCCATCGTGCACCGCGACC 1349488 ||||||||| | |||| ||||||||| | | ||||||||||| ||||||||| Sbjct 6966873 CGGCCAAGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACA 6966932 Query 1349489 TCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCC 1349548 ||||| | ||||| | ||| ||||||| | |||||| |||||| |||||||| || | Sbjct 6966933 TCAAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTCGCCGACTTCGGGC 6966992 Query 1349549 TGGCGCGCAT 1349558 || |||| || Sbjct 6966993 TGTCGCGGAT 6967002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138215223804