Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq9 138 1e-27 seq5 131 2e-25 seq1 127 2e-24 seq7 125 6e-24 seq8 123 2e-23 seq11 116 3e-21 seq12 86.0 6e-12 seq10 82.4 7e-11 seq6 82.4 7e-11 >seq9 Length=29411429 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| ||| |||| ||||||||||| || || || Sbjct 7709364 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 7709305 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||||||| | || | | |||||||||| |||||| ||||| || Sbjct 7709304 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 7709246 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| ||||||||| || ||||||| || |||| Sbjct 7709245 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 7709186 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 7709185 CGAAGATCTGCAT 7709173 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | | ||||| |||||||| | ||| ||| || |||||||||||||| | Sbjct 26092055 TTCCACCCCTGAGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAG 26091996 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || || | || ||||| ||||| || || || |||| || |||||||| | | Sbjct 26091995 CTAATGTACGTCCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGG 26091936 Query 35628 GAACGCTCTCCTTGTCC 35644 ||| | ||| |||||| Sbjct 26091935 GAATACCCTCTTTGTCC 26091919 >seq5 Length=35065507 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||||||||| |||| ||| || ||| || |||||||| || ||||| Sbjct 30648669 CTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACTGTCCTCAAGCTGCTTGCCGGCAAA 30648728 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | |||||||||| |||||| ||||| | | Sbjct 30648729 GATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 30648788 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||| | ||||| || || || ||||| || ||||| Sbjct 30648789 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 30648848 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 30648849 AAAGATCTGCAT 30648860 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| || ||||||||||| ||| Sbjct 30648406 CCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCC 30648465 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || ||||| ||||||||||||| ||| Sbjct 30648466 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGA 30648525 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | | |||||||||| |||||| ||||| |||| | | ||| | || || || Sbjct 30648526 ATTCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGTTGTCGATCGTATGAGAAGACTCAAC 30648584 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||| || || || || |||| || || ||||| |||||||| Sbjct 30648585 CTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCAT 30648632 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || | || ||||||||||| || || || Sbjct 3011928 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAA 3011987 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| | |||||||||| |||||| ||||| | | Sbjct 3011988 GATCAGACGCTGCTGGTCTGGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 3012047 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || ||||||| ||||| || || || ||||| || || Sbjct 3012048 ATCAATGGTGTCGGAGCTC---TCAACCTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTT 3012104 Query 35722 CACAAATATCTGCAT 35736 ||| || |||||||| Sbjct 3012105 CACGAAGATCTGCAT 3012119 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || || || Sbjct 3013094 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3013153 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||| || |||||| ||| | | | Sbjct 3013154 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATT 3013213 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||| | ||||| || || || ||||| || ||||| Sbjct 3013214 ATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 3013273 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 3013274 AAAGATCTGCAT 3013285 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || | ||| |||||| || |||||||| ||||| Sbjct 3012121 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 3012180 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || |||||||| || || || || | ||||||||||| | || Sbjct 3012181 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 3012240 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || |||||||||| |||||| ||| | |||| | | ||||| |||| || Sbjct 3012241 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTCCGAGCTC---TC 3012296 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||||| || || || || | || || ||||| |||||||| Sbjct 3012297 AACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3012347 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/197 (70%), Gaps = 1/197 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || || ||||| || ||||| Sbjct 30648897 CTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCAGCAAA 30648956 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | |||| || ||||||||| ||||| ||||| | Sbjct 30648957 GATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTCACATC 30649016 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || || || || ||||| | ||||| || || || || | || ||||| Sbjct 30649017 ATCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTCTTCAC 30649076 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 30649077 AAAGATCTGCA-TCTGT 30649092 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || ||||| Sbjct 3012384 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 3012443 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 || | |||||||| |||| |||| || |||||||||| |||||| Sbjct 3012444 GATGAGGCGCTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTT 3012491 >seq1 Length=42845077 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| || |||||||| ||||||| || ||| |||| || Sbjct 24053817 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 24053758 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || || | |||||||||||||| || | | |||||||||| Sbjct 24053757 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 24053698 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTT 35706 | ||| ||| | | | ||||||||| |||||||||| |||||| || || Sbjct 24053697 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 24053638 Query 35707 ACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| || ||||| || |||||||| Sbjct 24053637 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 24053608 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || || |||| ||||||||||| || || || Sbjct 24058285 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 24058226 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| || || |||| |||| |||| |||| | ||| | | Sbjct 24058225 GATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTT 24058166 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | |||| ||||| || ||| | | |||||| || | || ||| || ||||| Sbjct 24058165 CTCGACCGAGTCGCAGCTGTCGACCACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCAC 24058106 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 24058105 GAATATCTGCAT 24058094 >seq7 Length=28646061 Score = 125 bits (138), Expect = 6e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || ||||||||||| ||||| Sbjct 26601383 CTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAA 26601324 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| || | || |||||||||| |||||| ||||| || Sbjct 26601323 GATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 26601265 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||| | || || || || || |||| || |||| Sbjct 26601264 TGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCA 26601205 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 26601204 CGAAGATCTGCAT 26601192 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || || || |||||| || ||||| || || || | ||| || |||| || Sbjct 24916328 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 24916269 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || || | ||||||||||| | |||| | |||||||||| | Sbjct 24916268 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGG 24916209 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | | |||||| || || ||||||| |||||||| || Sbjct 24916208 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 24916149 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || |||||||| |||||||| Sbjct 24916148 CCAGTAAGGGTCTTCACAAAGATCTGCAT 24916120 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || |||| ||||||||||| || ||||| Sbjct 26600927 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCAAA 26600868 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | || | || |||||||||| |||||| ||| | | | Sbjct 26600867 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 26600808 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| ||| || ||||| | ||||| || || || ||||| || || || Sbjct 26600807 GTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGAC 26600748 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 26600747 GAAGATCTGCAT 26600736 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||||||| || | || ||||||||||| || || || Sbjct 26601155 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 26601096 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | |||||||||| |||||| ||||| | | Sbjct 26601095 GATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 26601036 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||| | |||||| || || || |||| || || || Sbjct 26601035 GTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGAC 26600976 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 26600975 GAAGATCTGCAT 26600964 Score = 113 bits (124), Expect = 4e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| || | || || |||||||| || || || Sbjct 24916539 CTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 24916480 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| |||||| ||||| | | Sbjct 24916479 GATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 24916420 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||||| ||||| || || || || | || ||||| Sbjct 24916419 GTCGATCGTGTCAGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 24916360 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 24916359 GAAGATCTGCAT 24916348 Score = 109 bits (120), Expect = 5e-19 Identities = 150/208 (72%), Gaps = 5/208 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| ||| || | || || |||||||| || || || Sbjct 26600250 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 26600191 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | || |||||||||| |||||| ||| | | | Sbjct 26600190 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 26600131 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || ||||| | ||||| || || || || | || ||||| Sbjct 26600130 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 26600071 Query 35725 AAATATCTGCATTCTGTGCGCACACACA 35752 ||| ||||||| ||| ||||||||| Sbjct 26600070 AAAGATCTGCA-TCT----GCACACACA 26600048 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| || || | ||| || | || || |||||||| || ||||| Sbjct 24916082 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAG 24916023 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||| | || | | |||||||||| |||||| ||||| | | Sbjct 24916022 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 24915963 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | ||||||| || || ||||||| || || || || || || | || ||||| Sbjct 24915962 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCAGTGAGGGTCTTCACG 24915903 Query 35726 AATATCTGCAT 35736 ||||| ||||| Sbjct 24915902 AATATTTGCAT 24915892 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| ||||| || | || ||| | || || |||||||| || || || Sbjct 24915855 CTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAA 24915796 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||||| ||| | || |||||||||| ||||| ||||| | | Sbjct 24915795 GATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATT 24915736 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||| ||| || || ||||||| ||||| || || || || | || || || Sbjct 24915735 GTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAAC 24915676 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 24915675 GAATATCTGCAT 24915664 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||| || ||||| | ||| || | || || |||||||| || || || Sbjct 24916767 CTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 24916708 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || |||||| ||| |||||| ||||| || Sbjct 24916707 GATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCA-CGT 24916649 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||||| ||||| || || || || | || |||| Sbjct 24916648 TGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCA 24916589 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 24916588 CGAAGATCTGCAT 24916576 >seq8 Length=28014461 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || |||||| || ||||||||||| || Sbjct 24290998 CCACCACGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT 24290939 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 |||| || | || || |||||||| || || || |||| |||||||| |||| ||| Sbjct 24290938 AAGGCGCGGCCATCCTCGAGCTGCTTGCCAGCCAAGATCAGTCGCTGCTGATCCGGGGGA 24290879 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| ||| ||||||| |||| | | ||||| ||| || || Sbjct 24290878 ATGCCCTCCTTGTCC-TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAAC 24290820 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 ||||| || || ||||| || ||||| || || ||||| || ||||||| Sbjct 24290819 CTCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATTC 24290770 Score = 118 bits (130), Expect = 1e-21 Identities = 156/215 (73%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 |||||| |||| ||| |||||| ||||||||||| ||||| | ||| || | || || Sbjct 22387571 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGGCCATCCTC 22387512 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 |||||||||||| || || || | | ||||||||||| || | || |||||| ||| Sbjct 22387511 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 22387452 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 |||||| ||||| | | | | ||||| |||| || ||||||| || || || Sbjct 22387451 GATCTTCGCCTTCACATTGTCGATGGTGTCTGAGCTC---TCAACCTCCAGGGTAATAGT 22387395 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 || || || | ||| || || || |||||||||| Sbjct 22387394 CTTGCCAGTGAGAGTCTTGACGAAAATCTGCATTC 22387360 Score = 116 bits (128), Expect = 3e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||| | ||| || | || || |||||||| || || || Sbjct 3565235 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3565176 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| || | | ||||||||| |||||| ||||| || Sbjct 3565175 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3565117 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || |||||||||| |||||| || || ||||||| || |||| Sbjct 3565116 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3565057 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 3565056 CGAAGATCTGCAT 3565044 Score = 105 bits (116), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || ||||||||||| || ||||| Sbjct 22387325 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAA 22387266 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | |||| || |||||||||| |||||| ||||| || Sbjct 22387265 AATAAGACGCTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 22387207 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||| | ||| || || || || || | || |||| Sbjct 22387206 TGTCGATCGTGTCTGATGACTCAACCTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCA 22387147 Query 35724 CAAATATCTGCATTC 35738 | || |||||||||| Sbjct 22387146 CGAAGATCTGCATTC 22387132 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || || | ||| | | || || |||||||| || ||||| Sbjct 22387097 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAA 22387038 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||||| |||| | |||||||||| |||| ||||| | | || Sbjct 22387037 GATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATC-TTTGCCTTAACGT 22386979 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | ||||| || || || ||||| || || | Sbjct 22386978 TGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGA 22386919 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 22386918 CAAAGATTTGCAT 22386906 Score = 102 bits (112), Expect = 7e-17 Identities = 151/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| || | ||| |||||| ||||||||||| ||||| | ||| || | || || Sbjct 22387799 CACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTC 22387740 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || || || |||| ||||||||||| | |||| | ||||||||| Sbjct 22387739 CAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTG 22387680 Query 35647 GATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGT 35703 |||||| ||||| | | | | || || |||| || ||||||| || || || Sbjct 22387679 GATCTTAGCCTTCACATTGTCGATGGTATCGGAGCTC---TCAACCTCCAGAGTAATGGT 22387623 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || | ||| || || || |||||||| Sbjct 22387622 CTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 22387590 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 ||||||| | | ||| | ||| | || | ||| |||||| || || ||||| || | Sbjct 24290772 TTCCACCCCTGAGCCTGAGCACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAG 24290713 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || || || |||| || |||||||| || || || || || |||||||||||| | Sbjct 24290712 CCGGGGCGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGG 24290653 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | || |||||||||| ||||| ||||| | | | | || || || || | Sbjct 24290652 GGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGA 24290593 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||| | ||| || || || || |||| || || ||||| |||||||| Sbjct 24290592 CCTCAAGCGTAATGGTCTTTCCGGTCAGGGTCTTGACAAAAATCTGCAT 24290544 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/198 (71%), Gaps = 3/198 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||||||||||| || | ||| || |||| || || ||||| |||||||| Sbjct 24290094 CTCTTTCCGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCAAGTTGCTTGCCCGCAAA 24290035 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| | |||||||||| ||||| ||| | | | Sbjct 24290034 GATGAGGCGCTGCTGGTCAGGTGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACA-T 24289976 Query 35665 TGCCA-CCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | ||||| || || ||||| | || || || || || || | || |||| Sbjct 24289975 TGTGAGTTGTGTCAGAGGACTCAACCTCTAGGGTTATGGTATTGCCAGTGAGTGTCTTCA 24289916 Query 35724 CAAATATCTGCATTCTGT 35741 |||| ||||||| ||||| Sbjct 24289915 CAAAGATCTGCA-TCTGT 24289899 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||| || || | || ||| | || || |||||||| || || || Sbjct 22386868 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAG 22386809 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | ||||||||||||| || | | |||||||||| |||||| ||| | | | Sbjct 22386808 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 22386749 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || || || ||||| | || || || || || || | ||| |||||| Sbjct 22386748 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTAAGAGTCTTCACA 22386689 Query 35726 AATATCTGCAT 35736 || |||||||| Sbjct 22386688 AAGATCTGCAT 22386678 >seq11 Length=26703665 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || || | ||| || | || || |||||||| || || || Sbjct 4117621 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCAGCGAA 4117680 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||||| |||| | |||||| ||| |||||| ||||| | | Sbjct 4117681 GATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTCGCCTTCACATT 4117740 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || |||||||| | ||||| | || || |||| |||||||| Sbjct 4117741 GTCGATTGTGTCGGATGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCAC 4117800 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4117801 AAAGATCTGCAT 4117812 >seq12 Length=20407407 Score = 86.0 bits (94), Expect = 6e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| ||||||| || ||| | || ||||||||||| || || || Sbjct 12157666 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 12157607 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||| ||||| || || | ||| | | ||||||||| Sbjct 12157606 TATCAAACGCTGTTGATCTGGAGGGATCCCTTCCTTGTCC 12157567 >seq10 Length=24717764 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||| || || |||| ||||||||||| || || || Sbjct 13570488 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTCCGGCCGTCCTCCAGCTGCTTCCCGGCGAA 13570547 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 13570548 GATCAGCCGCTGCTGGTCCG 13570567 >seq6 Length=36134596 Score = 82.4 bits (90), Expect = 7e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| || |||| ||| || |||| ||||||||||| || || || Sbjct 7350265 CTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGTCCGTCCTCCAGCTGCTTCCCGGCGAA 7350324 Query 35605 TATCAACCGCTGCTGGTCCG 35624 |||| |||||||||||||| Sbjct 7350325 GATCAGCCGCTGCTGGTCCG 7350344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793532380960