Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq2 500 1e-136 seq8 360 2e-94 seq4 224 1e-53 seq12 192 7e-44 seq1 188 9e-43 seq9 172 7e-38 seq11 159 4e-34 seq5 147 3e-30 seq3 91.5 2e-13 >seq2 Length=21549876 Score = 500 bits (554), Expect = 1e-136 Identities = 640/882 (73%), Gaps = 0/882 (0%) Strand=Plus/Plus Query 189767 GCATTTATTGCAGCACCACCTGTAGACATTGATGGCATCAGAGAGCCAGTTGCAGGTTCA 189826 || || || || || || || ||||| |||||||| || | ||||| ||| | ||||| Sbjct 19773172 GCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGTTCT 19773231 Query 189827 CTTCTCTATGGTAACAACATCATTTCTGGTGCTGTTGTACCTTCATCAAATGCTATTGGT 189886 | || || || ||||| || || |||||||| || | ||| | || || || || Sbjct 19773232 TTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGA 19773291 Query 189887 CTACACTTCTACCCAATCTGGGAAGCAGCAACAGTAGATGAGTGGCTTTACAATGGTGGT 189946 | ||||| |||||||| |||||||| ||| | || ||||||||| | |||||||||||| Sbjct 19773292 TTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGT 19773351 Query 189947 CCTTACCAGTTGGTAATCTTCCACTTCCTTATTGGTATCTCAGCATACATGGGAAGACAG 190006 ||||| || | | | | |||||| | ||||| | | || ||||| | || Sbjct 19773352 CCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAG 19773411 Query 190007 TGGGAATTATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCA 190066 |||||| | | | | || |||||| | |||||||| |||||| |||||||| || Sbjct 19773412 TGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCT 19773471 Query 190067 GTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCATTCTCTGAT 190126 || | || || ||| || ||| | | ||||| ||||||| || ||||||||| Sbjct 19773472 GTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGTCAAGGAAGTTTCTCTGAT 19773531 Query 190127 GGTATGCCTTTAGGTATCTCAGGTACATTCAACTTCATGTTTGTATTCCAAGCAGAACAT 190186 |||||||||||||| || || ||||| |||||||| ||| |||||||||| ||||| ||| Sbjct 19773532 GGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCAT 19773591 Query 190187 AATATCCTTATGCACCCATTCCATATGGCAGGTGTAGCAGGTATGTTTGGTGGAGCATTA 190246 || ||||||||||| ||||| || ||| ||||||||| ||| | || || || | || Sbjct 19773592 AACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTA 19773651 Query 190247 TTCTCTGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGAGAAACAACTGGTTTA 190306 ||| ||| ||||||||||| | ||||| ||| | | || || ||||| |||| Sbjct 19773652 TTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATTAGGGAAACCACTGAAAAC 19773711 Query 190307 GAGTCACAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACATACAACATAGTAGCT 190366 || || || | ||||||| ||||| ||||| ||||| || || || || || || Sbjct 19773712 GAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCC 19773771 Query 190367 GCTCATGGTTACTTTGGTAGACTTATCTTCCAGTATGCTTCATTCAACAACTCAAGAAGT 190426 ||||||||||| ||||| || | |||||||| |||||| || |||||||| || | Sbjct 19773772 GCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGATCT 19773831 Query 190427 TTACACTTCTTCTTAGCAGTATTCCCTGTAACCTGTGTATGGTTAACATCAATGGGTATT 190486 |||||||||||||| | | | |||||| | | ||||| || | | |||||| Sbjct 19773832 TTACACTTCTTCTTGGTTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATT 19773891 Query 190487 TGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGATGCACAA 190546 | || ||||| ||||| |||| || ||||| || ||||| |||||||||||| ||| Sbjct 19773892 AGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAA 19773951 Query 190547 GGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTA 190606 ||| || || | || | || ||| | | ||| | || || ||||||||||||||| Sbjct 19773952 GGTCGCGTTATTACTACTTTGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTA 19774011 Query 190607 ATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCT 190648 ||||| ||| | ||||| ||||||||||| |||||||||||| Sbjct 19774012 ATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 19774053 >seq8 Length=28014461 Score = 360 bits (398), Expect = 2e-94 Identities = 708/1045 (68%), Gaps = 33/1045 (3%) Strand=Plus/Minus Query 190796 TTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGT 190855 |||||| | | || ||||||||| | | || | ||||| || |||| |||||||| Sbjct 17889485 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17889426 Query 190856 CTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTT 190915 || | | || || ||||||| | | | || |||||||| ||||| || || ||| Sbjct 17889425 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17889366 Query 190916 GTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTG 190975 || ||| ||||||||| |||||| | || ||| || | ||||| || || || Sbjct 17889365 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTA 17889306 Query 190976 ACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGT 191035 || |||||||| ||||| |||| || | | | || ||| || | ||||||| Sbjct 17889305 ACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 17889246 Query 191036 CCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTTGTA 191095 || || |||||||| ||| |||||||| ||| | ||||| || |||| ||||| Sbjct 17889245 CCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 17889186 Query 191096 GCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGA 191155 || || ||||| | |||| || ||||| |||||||||||||| |||||| |||| Sbjct 17889185 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC---- 17889130 Query 191156 TTGGTGGGT---ATTA-GACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTT 191211 | ||| || ||| | ||||| ||||| || | || |||| || || ||||| Sbjct 17889129 TCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTT 17889070 Query 191212 CACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATT 191271 |||||| | || |||||||| || || | ||||||||||||| || || Sbjct 17889069 TGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTT 17889010 Query 191272 TGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACT 191331 ||| || ||||| || ||| ||| || || ||| | ||||| || || ||| || | Sbjct 17889009 TGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTT 17888950 Query 191332 CAACCCTTTCCACATGATGGGAGTTGCAGGTATTCTAGGTGGAGCATTACTATGTGCCAT 191391 ||||| || || |||||||||||||| || | |||| | || | ||||| || || Sbjct 17888949 GAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTAT 17888890 Query 191392 TCATGGTGCTACAGTACAGAACACCTTGTATGAGGACTCAAGCATCTATACAGATGGTCA 191451 |||||| || || || | ||||| | | ||||||| | || | Sbjct 17888889 TCATGGGGCAACCGTGGAAAACACTCTATTTGAGGAC---------------GGTGAT-- 17888847 Query 191452 AGTTCAAAGTACAACCTTTAGAGCATTTGATCCAACACAGGATGAGGAAACTTATTCTAT 191511 || |||| ||||| | || ||| | ||||| || | ||| ||||||||||| || Sbjct 17888846 GGTGCAAA----TACCTTCCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCCAT 17888791 Query 191512 GATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCATTCTCTAACAAAAGATT 191571 | |||| || || | || ||||| || || |||||| |||| || || || ||| | | Sbjct 17888790 GGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTG 17888731 Query 191572 TCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGGACATCATCAATAGGTAT 191631 |||| ||||| ||| | ||||| || || | || | |||| | || || | Sbjct 17888730 GTTACATTTCTTTATGCTATTTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGT 17888671 Query 191632 TGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCTCAAGAGATAAGAGCAGC 191691 || || || || || ||| || | || ||||| || || || || || || | ||||| Sbjct 17888670 AGTCGGCCTGGCTCTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGC 17888611 Query 191692 AGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGTATGAG 191751 ||||| || || ||||| || ||||| || || || |||||| | || || ||||| | Sbjct 17888610 GGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGTATTCG 17888551 Query 191752 AGCATGGATGTC--TTCAGTAGACCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTT 191809 || |||||| | |||| || || |||||||| || || | ||||| ||||| ||| Sbjct 17888550 TGCGTGGATGGCAGCTCAG--GATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTT 17888493 Query 191810 CTACCTAGAGGAAATGCATTGTAAT 191834 ||||| | ||||| || | |||| Sbjct 17888492 CTACCACGTGGAAACGCTCTTTAAT 17888468 >seq4 Length=20076173 Score = 224 bits (248), Expect = 1e-53 Identities = 393/570 (69%), Gaps = 8/570 (1%) Strand=Plus/Plus Query 190796 TTTGATGTGCTTGATGACTGGTTAAAACGTGATAGATTTGTATTCATAGGTTGGTCTGGT 190855 |||||| | | || ||||||||| | | || | ||||| || |||| |||||||| Sbjct 17460153 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 17460212 Query 190856 CTTATATTATTACCATGTGCTTTCCTATCAATTGGTGGTTGGTTCACAGGAACTACATTT 190915 || | | || || ||||||| | | | || |||||||| ||||| || || ||| Sbjct 17460213 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 17460272 Query 190916 GTTACTAGTTGGTATACACATGGAATTGCATCTTCATACCTTGAAGGAGCAAACTTTTTG 190975 || ||| ||||||||| |||||| | || ||| || | ||||| || || || Sbjct 17460273 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTA 17460332 Query 190976 ACAGCAGCAGTATCCACACCTGGTGATGCTATGGGTCATAGTTTATTATTCTTATGGGGT 191035 || |||||||| ||||| |||| || | | | || ||| || | ||||||| Sbjct 17460333 ACCGCAGCAGTTTCCACCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 17460392 Query 191036 CCAGAGGCACAAGGTTCATTTGTTCGTTGGTTACAAATTGGTGGACTTTGGAACTTTGTA 191095 || || |||||||| ||| |||||||| ||| | ||||| || |||| ||||| Sbjct 17460393 CCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTT 17460452 Query 191096 GCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTTGAAATTGCAGGA 191155 || || ||||| | |||| || ||||| |||||||||||||| |||||| |||| Sbjct 17460453 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC---- 17460508 Query 191156 TTGGTGGGT---ATT-AGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATAGCAGTTTT 191211 | ||| || ||| | ||||| ||||| || | || |||| || || ||||| Sbjct 17460509 TCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCATTCTCTGGCCCAATCGCTGTTTT 17460568 Query 191212 CACAAGTGTATTCTTAATCTATCCACTTGGTCAGCACAGTTGGTTCTTTGCACCTTCATT 191271 |||||| | || |||||||| || || | ||||||||||||| || || Sbjct 17460569 TGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTT 17460628 Query 191272 TGGAGTTGCAGCAATCTTTAGATATATTCTATTCATTCAAGGTTTCCACAATATTACACT 191331 ||| || ||||| || ||| ||| || || ||| | ||||| || || ||| || | Sbjct 17460629 TGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTT 17460688 Query 191332 CAACCCTTTCCACATGATGGGAGTTGCAGG 191361 ||||| || || |||||||||||||| || Sbjct 17460689 GAACCCATTTCATATGATGGGAGTTGCCGG 17460718 Score = 120 bits (132), Expect = 4e-22 Identities = 141/186 (76%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 184424 TTAATACCAGATAAGAGTAAGT-TAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGG 184482 || ||||| ||||| || || | | || || | |||||||| ||||| ||||| |||| Sbjct 17469644 TTGATACCCGATAA-AGCAAATCTTGGTTTTCGCTTCCCTTGCGATGGGCCTGGGCGAGG 17469702 Query 184483 AGGCACTTGTCAGGTATCAGGATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAA 184542 || || ||||| ||||| | ||||||||||| ||| | | | |||||| |||||| || Sbjct 17469703 GGGAACATGTCAAGTATCCGCCTGGGATCATGTTTTCTTAGATCTATTCTAGATGTACAA 17469762 Query 184543 TTGCATCTCTATAGTAATCTTCCACTTTAGTTGGAGAATGCA---AGATGTATGGGGT-C 184598 || ||| || |||| || ||||| |||||||||| |||||| ||||| | |||| | Sbjct 17469763 TTTCATTTCGGTAGTCATTTTCCATTTTAGTTGGAAAATGCAGTTGGATGTTTAGGGTAC 17469822 Query 184599 TATCAG 184604 ||| || Sbjct 17469823 TATAAG 17469828 Score = 114 bits (126), Expect = 2e-20 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 182524 ATGCACACAATGTGTGAAGGCTTGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGG 182583 |||||| |||| ||| |||| |||| ||||||||||||||| | ||||||||||| Sbjct 19951905 ATGCACTCAATATGTACGAGCTTATCCAACAGATGTATTAGAAATGATACCTTGGGATGG 19951964 Query 182584 GTGCAAAGCAAAGCAAATTGCTTCCTCACCTAGA-ACTGAGGATTGTGTAGGATGTAAGA 182642 || ||||| ||||| ||||||| | || | | || | ||||||||||| ||||||| Sbjct 19951965 ATGTAAAGCCAAGCAGATTGCTTTCGTGCCAAAAGACCAAAGATTGTGTAGGTTGTAAGA 19952024 Query 182643 GATGTGAAACAGCATGTCCTACAGACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAA 182702 |||| ||| || | || ||| | ||||||||| || ||||| || || | || | Sbjct 19952025 GATGCGAATTTGCCTTCCCAACAAATTTTTTAAGTGCCCGCGTTTATTTAGGACCTGAGA 19952084 Query 182703 CCACAAGAAGCATGGGTC 182720 | || | | ||||| || Sbjct 19952085 CAACCCGCATCATGGCTC 19952102 >seq12 Length=20407407 Score = 192 bits (212), Expect = 7e-44 Identities = 190/246 (77%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 182484 TAATGTCTCACGCCGTTAAAATATATGATACTTGCATTGGATGCACACAATGTGTGAAGG 182543 ||||||| || |||| ||||| |||||||| || || ||||||| ||||||| | Sbjct 15964898 TAATGTCACATTCCGTAAAAATTTATGATACATGTATAAGATGCACTCAATGTGCACGAG 15964957 Query 182544 CTTGTCCATTGGATGTATTAGAAATGGTTCCTTGGGATGGGTGCAAAGCAAAGCAAATTG 182603 |||||||| | |||||||| ||||| | ||||||||||| || ||||| ||||||||| Sbjct 15964958 CTTGTCCAATAAATGTATTACAAATGATACCTTGGGATGGATGTAAAGCCAAGCAAATTA 15965017 Query 182604 CTTCCTCACCTAGAACTGAGGATTGTGTAGGATGTAAGAGATGTGAAACAGCATGTCCTA 182663 ||||| ||| ||||| | |||||||| || ||||||||||| ||| | || || || | Sbjct 15965018 CTTCCGTACCAAGAACCAAAGATTGTGTGGGTTGTAAGAGATGCGAATCCGCCTGCCCAA 15965077 Query 182664 CAGACTTTTTAAGTATTCGTGTTTACTTGGGTGCAGAAACCACAAGAAGCATGGGTCTAG 182723 |||| ||||||||| | || ||||| || || | || || || | ||||||| |||| Sbjct 15965078 CAGATTTTTTAAGTGTCCGCGTTTATTTAGGACCTGAGACAACCCGCAGCATGGCTCTAT 15965137 Query 182724 CATATT 182729 | |||| Sbjct 15965138 CTTATT 15965143 >seq1 Length=42845077 Score = 188 bits (208), Expect = 9e-43 Identities = 288/401 (72%), Gaps = 22/401 (5%) Strand=Plus/Minus Query 184382 TTAATTCTTCTCAAGGGTGTTTTATACTCTAGAAACTCACAATTAATACCAGATAAGAGT 184441 ||||| ||| | || | |||||||| || | | || | || ||||| ||||| || Sbjct 42349206 TTAATACTTTTGAAAGTTGTTTTATTTGCTCGCAGTTCCCGTTTGATACCCGATAA-AGC 42349148 Query 184442 AAGT-TAGGATTCAGATTCCCTTGTGATGGTCCTGGTAGAGGAGGCACTTGTCAGGTATC 184500 || | | || || | |||||||| ||||| ||||| |||| || || ||||| ||||| Sbjct 42349147 AAATCTTGGTTTTCGCTTCCCTTGCGATGGGCCTGGGCGAGGGGGAACATGTCAAGTATC 42349088 Query 184501 AGGATGGGATCATGTATTCCTTGGTTTATTCTGGATGTATAATTGCATCTCTATAGTAAT 184560 | ||||||||||| ||| | || ||||||||||||| |||| ||| || |||| || Sbjct 42349087 CGCCTGGGATCATGTTTTCTTATGTCTATTCTGGATGTACAATTCCATTTCGGTAGTCAT 42349028 Query 184561 CTTCCACTTTAGTTGGAGAATGCA---AGATGTATGGGGT-CTATCA----------GGA 184606 ||||| || ||||||| |||||| ||||| |||||| |||| | || Sbjct 42349027 TTTCCATTTCAGTTGGAAAATGCAGTCGGATGTTTGGGGTACTATAAGTGATCAAGGGGT 42348968 Query 184607 GGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTATGGTCA 184666 ||||||||||| |||||||| | ||| || ||||| ||| | |||| ||||| ||| || Sbjct 42348967 GGTAACTTTGCACAGAGTTCCACTACGATTAATGGGTGGCTCCGAGATTTCTTGTGGGCA 42348908 Query 184667 CAGTCAAGTCAAGTTCTCAATAGTTATGG-ACAAGA-CATCAGCATGTATGGTTTGCTAT 184724 ||| || ||||| | | |||||| | | ||| ||| |||||| | | | Sbjct 42348907 CAGGCATCCCAAGTAATTCAGTCTTATGGTTCTTCATTATCCGCA--TATGGTCT-TTTT 42348851 Query 184725 TTCTT-GGAGCACATTTTGTATGGGCATTCAGTTTGATGTT 184764 ||||| || || |||||||| ||||| |||||||| ||||| Sbjct 42348850 TTCTTAGGTGCTCATTTTGTCTGGGCCTTCAGTTTAATGTT 42348810 >seq9 Length=29411429 Score = 172 bits (190), Expect = 7e-38 Identities = 220/303 (73%), Gaps = 0/303 (0%) Strand=Plus/Plus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||| | || |||| || || |||||||||| ||| | || ||| | | | ||| | Sbjct 9367142 ACCTATAACGATTCACTACCCCTATGAAAAATCAATTACATCGGAGCGTTTCCGGGGGCG 9367201 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || |||| ||| |||||||||||||||||||||||||||||||| | || || ||||| Sbjct 9367202 AATCCACTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGCGTATGCCCTAT 9367261 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGAAA 188816 || ||||| | || |||||| | | | || | | ||| | ||| || | || Sbjct 9367262 AGATCTACCTCTTGTGGATTGGAGATTTGAAAAGGATATTAAAAGGAAACAATTGCTTAA 9367321 Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876 |||| ||||| || || | ||| || || ||||| |||||||| || |||||||| || Sbjct 9367322 TTATAGTATTGATTTCGGAGTTTGTATATTTTGTGGTAATTGTGTTGAGTACTGTCCGAC 9367381 Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACTCAA 188936 |||||| |||| ||||| ||||| |||||||| ||| || ||| | ||| || | || Sbjct 9367382 AAACTGTTTATCAATGACTGAAGAATATGAACTTTCTACTTATGATCGTCATGAATTGAA 9367441 Query 188937 CTA 188939 || Sbjct 9367442 TTA 9367444 Score = 118 bits (130), Expect = 1e-21 Identities = 112/142 (79%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 186503 TTTCT-ACCAATAGGACCTGCTGATTTATTAGTTCATCATGCTATTGCACTTGGATTACA 186561 ||||| | |||||||||||| ||||| || ||||||||||||||||| | || || || Sbjct 2340034 TTTCTTAACAATAGGACCTGGAGATTTCTTGGTTCATCATGCTATTGCTTTAGGTTTGCA 2339975 Query 186562 TACTACAACTTTAATCCTAGTCAAGGGTGCATTAGATGCTAGAGGTTCAAAACTCATACC 186621 ||| || || || || |||| |||||||| |||||||| | ||||| ||| | || || Sbjct 2339974 TACAACTACATTGATTTTAGTAAAGGGTGCTTTAGATGCACGCGGTTCCAAATTAATGCC 2339915 Query 186622 AGATAAGAAAGATTTAGGATAT 186643 ||||| |||||||| ||| || Sbjct 2339914 GGATAAAAAAGATTTTGGAAAT 2339893 >seq11 Length=26703665 Score = 159 bits (176), Expect = 4e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 186503 TTTCTACCAATAGGACCTGCTGATTTATTAGTTCATCATGCTATTGCACTTGGATTACAT 186562 |||| ||| ||||||||| ||||| || ||||||||||||||||| | || || ||| Sbjct 23558501 TTTCCACCGGTAGGACCTGGAGATTTCTTGGTTCATCATGCTATTGCTTTAGGTTTGCAT 23558442 Query 186563 ACTACAACTTTAATCCTAGTCAAGGGTGCATTAGATGCTAGAGGTTCAAAACTCATACCA 186622 || || || || || |||| |||||||| |||||||| | ||||| ||| | || || Sbjct 23558441 ACAACTACATTGATTTTAGTAAAGGGTGCTTTAGATGCACGCGGTTCCAAATTAATGCCG 23558382 Query 186623 GATAAGAAAGATTTAGGATATTCATTCCCTTGTGATGGTCCAGGCAGAGGTGGTACTTGT 186682 ||||| |||||||| |||||| || ||||| || || || || | || ||||||||| Sbjct 23558381 GATAAAAAAGATTTTGGATATAGTTTTCCTTGCGACGGCCCTGGTCGCGGCGGTACTTGT 23558322 Query 186683 GATAGTTCTGGTTGGGATGCTTT 186705 |||| ||||| |||||| || || Sbjct 23558321 GATATTTCTGCTTGGGACGCGTT 23558299 >seq5 Length=35065507 Score = 147 bits (162), Expect = 3e-30 Identities = 214/303 (71%), Gaps = 7/303 (2%) Strand=Plus/Plus Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696 |||| | || |||| || || |||||||||| ||| | || ||| | | | ||| | Sbjct 12946737 ACCTATAACGATTCACTACCCCTATGAAAAATCAATTACATCGGAGCGTTTCCGGGGGCG 12946796 Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756 || |||| ||| |||||||||||||||||||||||||||||||| | || || ||||| Sbjct 12946797 AATCCACTTTGAATTTGATAAATGTATTGCTTGTGAAGTATGTGTTCGCGTATGCCCTAT 12946856 Query 188757 TAATTTACCTGTAGTTGATTGGGTAATGAATAAACAAACTAAGAAGAAGGAACTTAGAAA 188816 || ||||| | || |||||| | | | || | | ||| | ||| || | || Sbjct 12946857 AGATCTACCTCTTGTGGATTGGAGATTTGAAAAGGATATTAAAAGGAAACAATTGCTTAA 12946916 Query 188817 TTATTCAATTGACTTTGGTGCTTGCATTTTCTGTGGGAATTGTGTAGAATACTGTCCAAC 188876 |||| ||||| || || | ||| || || ||||| |||||||| || ||||||| Sbjct 12946917 TTATAGTATTGATTTCGGAGTTTGTATATTTTGTGGTAATTGTGTTGAGTACTGTC---- 12946972 Query 188877 TAACTGTCTATCCATGACAGAAGAGTATGAACTATCTGTTTTTGACAGACATCAACTCAA 188936 |||| |||| ||||| ||||| ||||||| ||| || ||| | ||| || | || Sbjct 12946973 ---CTGTTTATCAATGACTGAAGAACATGAACTTTCTACTTATGATCGTCATGAATTGAA 12947029 Query 188937 CTA 188939 || Sbjct 12947030 TTA 12947032 Score = 96.9 bits (106), Expect = 4e-15 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 190481 GGTATTTGCACAATGGCATTCAACTTAAATGGTTTCAACTTTAACCAGTCTGTAGTTGAT 190540 |||||| | || ||||| ||||| ||||||| ||||| || ||||| |||||||||||| Sbjct 15426018 GGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTCAACCA-TCTGTAGTTGAT 15425960 Query 190541 GCACAAGGTAAAATTGTTCCAACATGGGGCGATGTTCTTAACAGAGCAAACCTTGGTATG 190600 |||||| || || || |||| ||| | | ||| | ||||| |||| |||| Sbjct 15425959 AGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCAAATCTTGCTATG 15425900 Query 190601 GAAGTAATGCATGAAAGAAATGCACACAAC 190630 |||||||| || ||| | ||||| ||| || Sbjct 15425899 GAAGTAATTCACGAACGTAATGCTCACCAC 15425870 >seq3 Length=24378308 Score = 91.5 bits (100), Expect = 2e-13 Identities = 117/156 (75%), Gaps = 4/156 (3%) Strand=Plus/Minus Query 186239 TTAAGTTGGG-TATCACTATTCCTTGGATTCCATACTTTAGGAATCTATGTCCATAATGA 186297 |||||||||| || | | ||||| ||||||||||| || || | ||||| |||||||| Sbjct 6859992 TTAAGTTGGGCTAGTA-TCTTCCTAGGATTCCATACCTTGGGCCTTTATGTTCATAATGA 6859934 Query 186298 TGTAGTAATGGCATTTGGTCATCCTGAGAGACAGATATTAATTGAACCTATATTTGCACA 186357 || | | || |||||| ||| || | || || || || |||||||||||||| || Sbjct 6859933 CGTCATGCTTGCTTTTGGTACTCCAGAAAAGCAAATCTTGATCGAACCTATATTTGCTCA 6859874 Query 186358 GTGGATACAGGCAGCATCA-GGTAAGATGATGTATG 186392 |||||||| | || ||| ||||||| || |||| Sbjct 6859873 ATGGATACAATCGGC-TCATGGTAAGACGACATATG 6859839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631427105285920