Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20nivara_20[genbank_20GCA_5F000576065.1_202014-02-25] 12 sequences; 337,950,324 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq9 183 3e-41 seq8 179 3e-40 seq1 170 2e-37 seq7 143 2e-29 seq5 141 9e-29 seq11 136 4e-27 seq6 118 1e-21 seq10 113 4e-20 seq12 104 2e-17 >seq9 Length=29411429 Score = 183 bits (202), Expect = 3e-41 Identities = 184/234 (79%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | |||||| || || || ||||||||| ||||| ||||||| Sbjct 7709401 CGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGG 7709342 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCG 41752 |||||||||| |||| || ||||||||||||||||| || || ||||| ||||| ||| Sbjct 7709341 CGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGCG 7709282 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 ||| | | |||||||||| ||| || |||| ||| | | | ||||| ||||| Sbjct 7709281 GGATC-CCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTC 7709224 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||||| ||| ||||| || |||||||| ||||| ||||| |||||||| || Sbjct 7709223 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 7709170 >seq8 Length=28014461 Score = 179 bits (198), Expect = 3e-40 Identities = 181/233 (78%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||||||||| || || | ||| || || || ||| ||||||||| ||||| ||||||| Sbjct 3565272 CGCCGCCGCGGAGGCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 3565213 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 ||||||||| | || |||||||||||||||||||| || |||||||| ||||||| || Sbjct 3565212 CGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGG 3565153 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | | ||||||||| ||| || |||| ||| | | | ||||| |||||| Sbjct 3565152 GGATCCCTTCCTTGTCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCCGAGGACTCC 3565094 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||||||| ||| || || || |||||||| ||||| ||||| |||||||| || Sbjct 3565093 ACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 3565041 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||||| |||| ||| ||||||||| ||||| || || | Sbjct 24290999 GCCACCACGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGC 24290940 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || ||| | || |||||||||||||| || || ||||| ||||| || |||| ||| Sbjct 24290939 TAAGGCGCGGCCATCCTCGAGCTGCTTGCCAGCCAAGATCAGTCGCTGCTGATCCGGGGG 24290880 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || || |||||||||| ||| | ||||||| ||| | | | ||||| |||||| | Sbjct 24290879 AATGCCCTCCTTGTCC-TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAA 24290821 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || ||||| || |||| ||||| || || || ||||| Sbjct 24290820 CCTCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 24290772 Score = 131 bits (144), Expect = 2e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | |||||| || || || ||||||||||||||| ||||||| |||||| || Sbjct 22387807 AGGCGGAGCACCAGGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGG 22387748 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || ||||||||||||||||| ||||||||||| ||||| | ||||| | ||| Sbjct 22387747 CCATCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCC 22387688 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGT 41823 |||||| ||| || |||| || | | | || ||| ||| ||||||| || Sbjct 22387687 TTGTCCTGGATCTTAGCCTTC-ACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGT 22387629 Query 41824 TATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || ||||| ||||| |||||||| Sbjct 22387628 AATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 22387590 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| || | || || || || ||| ||||||||| ||||| ||||| | | Sbjct 22387360 CCACCCCTTAGGCGCAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 22387301 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || |||||||||||||| || || || ||||| || || | |||| Sbjct 22387300 AGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCAAAAATAAGACGCTGCTGATCTGGGGGA 22387241 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| ||| | | | ||||| ||||| || Sbjct 22387240 ATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATCGTGTCTGATGACTCAAC 22387182 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| || || || || || || ||||| ||||| |||||||| Sbjct 22387181 CTCAAGCGTAATGGTCTTGCCAGTAAGGGTCTTCACGAAGATCTGCAT 22387134 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| || | || || || || ||| ||||||||| ||||| ||||| | Sbjct 22387132 CCTCCCCTTAGGCGGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 22387073 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || |||||||||||||| || || ||||| ||||| ||||||| |||| Sbjct 22387072 AGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGA 22387013 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| || | ||||| | |||| | | | ||| || ||||| || Sbjct 22387012 ATCCCCTCCTTGTCC-TGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAAC 22386954 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || |||| ||||| || || || |||||| Sbjct 22386953 CTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCATG 22386905 Score = 114 bits (126), Expect = 1e-20 Identities = 161/222 (73%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 41645 AGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGC 41704 || || | ||||| || || || ||||||||||||||| ||||||| |||||||| Sbjct 22387579 AGGCGGAGCACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGG 22387520 Query 41705 TCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCC 41764 | || || |||||||| || ||||| || || | ||| ||||||| ||| | || |||| Sbjct 22387519 CCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCC 22387460 Query 41765 TTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTCCACCTCCAC 41820 || ||| ||| || |||| || | | | ||||| ||| ||| ||||||| Sbjct 22387459 TTATCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCTGAGCT---CTCAACCTCCAG 22387404 Query 41821 CGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || || ||||| |||||||||||||| Sbjct 22387403 GGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 22387362 Score = 114 bits (126), Expect = 1e-20 Identities = 154/212 (73%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || || |||||| || || || ||||| | ||| ||| |||| || Sbjct 24290753 CACTAGGTGAAGGGTAGACTCCTTGTGGATATTGTAGTCAGCCGGGGCGCGTCCGTCCTC 24290694 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||||||||||||| || | |||||| |||||| ||| | || |||||||||| | Sbjct 24290693 GAGCTGCTTGCCGGCGAAGATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCCTTGTCC-T 24290635 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 || | || || | || | | | || || ||||| ||||| | ||| || || | Sbjct 24290634 GAATCTTCGCCTTCACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCT 24290575 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || ||||| ||||| || |||||||||||| Sbjct 24290574 TTCCGGTCAGGGTCTTGACAAAAATCTGCATG 24290543 Score = 104 bits (114), Expect = 2e-17 Identities = 98/124 (79%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||||||||| || || | |||||| || ||||| ||||||||| ||||| |||||| Sbjct 20327436 CCGCCGCCGCGGAGGCGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 20327495 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GC 41751 | || ||||| |||| || |||||||| || ||||| || || ||||| || ||| || Sbjct 20327496 GCCAGCGTGCGGCCGTCTTCCAGCTGCTTCCCCGCGAAGATGAGCCGCTGCTGATCCGGC 20327555 Query 41752 GGGA 41755 |||| Sbjct 20327556 GGGA 20327559 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || ||| |||||||| ||||| ||||| | Sbjct 22386905 GCCTCCCCGGAGGCGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGC 22386846 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || |||||| | || |||||||||||||| ||||| || || ||||| ||||||| || Sbjct 22386845 AAGCGTGCGCCCATCTTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGG 22386786 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| || | || || | || | | | || || ||||| | Sbjct 22386785 GATTCCCTCCTTGTCC-TGGATCTTGGCCTTTACATTGTCAATGGTATCCGAGGACTCAA 22386727 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | ||||| || || || || || ||||| || || |||||||| Sbjct 22386726 CCTCAAGGGTTATGGTCTTGCCAGTAAGAGTCTTCACAAAGATCTGCAT 22386678 >seq1 Length=42845077 Score = 170 bits (188), Expect = 2e-37 Identities = 179/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | |||||| |||||||| ||||||||| ||||| ||||||| Sbjct 24053835 GCCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 24053776 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || |||||| |||| || ||||||||||||||||| || || ||||| |||||| |||| Sbjct 24053775 CAGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 24053716 Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACG-ACGACACAGTGTCGCTCGACTCC 41812 || | | |||||||||| || || || | ||| | | |||||||| |||| Sbjct 24053715 GATC-CCCTCCTTGTCC-TGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCC 24053658 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| ||| || || || |||||||| ||||| ||||| |||||||| Sbjct 24053657 ACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 24053608 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||| ||| || || | ||| || |||||||| ||||||||| ||||| ||||||| Sbjct 24058321 GCCGCGGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 24058262 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| || ||||||||||||||||| || || ||||| |||| || || Sbjct 24058261 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGG 24058202 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 |||| |||| |||| ||| | ||| | | || | ||||| || || Sbjct 24058201 GACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGAC 24058142 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 | | | ||| || || | || |||| ||||| ||||| |||||||| || Sbjct 24058141 CACGAGCGTGATGGTCCTCCCGTTCAGGGTCTTCACGAATATCTGCATCTT 24058091 >seq7 Length=28646061 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| ||| ||||||||| ||||||||||||| Sbjct 24916802 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCA 24916743 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || |||||||| ||||| | || Sbjct 24916742 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGG 24916683 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| || |||| ||| | | | ||||| ||||| || Sbjct 24916682 ATGCCCTCCTTATCCTGGATCTTGGCCTTC-ACGTTGTCGATGGTGTCAGAGGACTCAAC 24916624 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 24916623 CTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 24916576 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||| |||| ||| ||||||||| ||||||||||| | Sbjct 24916346 CCTCCACGAAGGCGGAGGACCAAGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCA 24916287 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 24916286 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGA 24916227 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| || | | | ||||| ||||| || Sbjct 24916226 ATACCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATCGTGTCAGAGGACTCAAC 24916168 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || ||||| || || || || ||||| || || |||||||| Sbjct 24916167 CTCCAAGGTGATCGTCTTGCCAGTAAGGGTCTTCACAAAGATCTGCAT 24916120 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| || || ||| ||||||||| ||||| ||||| | | |||||| | || || Sbjct 26601172 ACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCC 26601113 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||||||||| || || ||||| ||||||| ||| | | |||||||||| | Sbjct 26601112 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 26601053 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || |||| || | | | ||||| ||||| ||||| | ||| || || || Sbjct 26601052 ATCTTGGCCTTC-ACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTT 26600994 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| ||||| |||||||| Sbjct 26600993 GCCGGTCAGGGTCTTGACGAAGATCTGCAT 26600964 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || || ||||| ||| ||||||||| ||||| || || | Sbjct 24916574 CCTCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 24916515 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| || |||||||| ||||| | ||| Sbjct 24916514 AGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGA 24916455 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| || | | | ||||| |||||| || Sbjct 24916454 ATACCCTCCTTGTCCTGGATCTTGGCCTTC-ACATTGTCGATCGTGTCAGACGACTCAAC 24916396 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| ||||| |||||||| Sbjct 24916395 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 24916348 Score = 123 bits (136), Expect = 2e-23 Identities = 156/212 (74%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || ||| ||||||||| ||||| ||||||| |||||||| |||| || Sbjct 26600945 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTC 26600886 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||| || || || || ||||| ||||| | ||| | || |||||||||| | Sbjct 26600885 CAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC-T 26600827 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 | | || || | || | | | ||||| |||||| ||||| | || || || | Sbjct 26600826 GGATCTTGGCCTTGACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCT 26600767 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || |||| ||||| ||||| ||||||||| Sbjct 26600766 TGCCAGTCAAGGTCTTGACGAAGATCTGCATG 26600735 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || |||| ||| ||||||||| |||||||| || | Sbjct 24915891 GCCTCCACGAAGGCGGAGGACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGC 24915832 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || ||| | || || ||||||||||| ||||| || ||||| || ||||||| || Sbjct 24915831 GAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCCGGAGG 24915772 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| | || || | || | | | || ||| ||||| | Sbjct 24915771 GATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAA 24915713 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| || || || || || || || ||||| ||||| |||||||| Sbjct 24915712 CCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACGAATATCTGCAT 24915664 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || ||| ||||||||| ||||| ||||||| |||||||| | || || Sbjct 26600268 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTC 26600209 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 ||||||||||| ||||| || || ||||| ||||||| ||| | || |||||||||| | Sbjct 26600208 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-T 26600150 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 | | || || | || | | | ||||| ||||| ||||| | || || || | Sbjct 26600149 GGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCT 26600090 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || ||||| || || |||||||| Sbjct 26600089 TGCCGGTGAGGGTCTTCACAAAGATCTGCAT 26600059 Score = 89.7 bits (98), Expect = 5e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || ||| ||||||||| ||||| ||||| | || ||||| | || || Sbjct 26600717 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGTGTGCGGCCATCCTC 26600658 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 ||||||||||| ||||| || || ||||| ||||||| ||| | || |||||| || Sbjct 26600657 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATC 26600601 >seq5 Length=35065507 Score = 141 bits (156), Expect = 9e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | |||||| |||| ||| ||||||||| ||||| || || | Sbjct 30648405 GCCACCACGGAGGCGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGC 30648464 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||||||||| |||| |||||| ||||||| ||| Sbjct 30648465 CAGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGG 30648524 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||||| ||| || |||| ||| | | | || | ||||| | Sbjct 30648525 AATTCCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTGTCGATCGTATGAGAAGACTCAA 30648583 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | ||| || || || || ||||| ||||| || |||||||||||| Sbjct 30648584 CCTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACAAAAATCTGCATG 30648633 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || ||| ||||||||| ||||| ||||||| | Sbjct 3011893 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3011952 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||||||||| ||||| ||||| ||||| ||||| | |||| Sbjct 3011953 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 3012012 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || ||||| | | | | |||||| ||| || Sbjct 3012013 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCA-ATGGTGTCGGAGCTCTCAAC 3012071 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || |||| ||||| ||||| |||||||| Sbjct 3012072 CTCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3012119 Score = 136 bits (150), Expect = 4e-27 Identities = 171/231 (74%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || || ||||||||| ||||| ||||||| | Sbjct 3012121 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 3012180 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || |||||||||||||||||||| || || ||||| ||||| | ||| Sbjct 3012181 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 3012240 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACTC 41811 | || |||||||||| || | || || | ||| | | | ||||| ||| ||| Sbjct 3012241 ATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCT---CTC 3012296 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||||| || || || || || || || ||||| || || |||||||| Sbjct 3012297 AACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3012347 Score = 100 bits (110), Expect = 3e-16 Identities = 151/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712 ||| || || || ||| ||| ||||||||||| || || | ||||| || ||| || Sbjct 30648651 CACAAGGTGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGCCAGGGTCCGACTGTCCTC 30648710 Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCAT 41772 |||||||||||||| || || || ||||| ||||| | || | | |||||||||| Sbjct 30648711 AAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCAGGAGGGATCCCCTCCTTGTCCTG 30648770 Query 41773 GATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTT 41831 ||| || |||| || | | | ||||| |||||| ||||| | || || || | Sbjct 30648771 GATCTTCGCCTTC-ACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATGGTCT 30648829 Query 41832 TACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 | || |||| ||||| || || ||||||||| Sbjct 30648830 TTCCTGTCAAGGTCTTCACAAAGATCTGCATG 30648861 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || ||| ||||||||| ||||| ||||| | Sbjct 3012349 CCACCACGAAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 3012408 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || ||||||||||| || || || |||||||| || |||| |||| Sbjct 3012409 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGATCCGGGGGA 3012468 Query 41756 ACGCTCTCCTTGTCCATGATTTT 41778 | || |||||||||| ||| || Sbjct 3012469 ATGCCCTCCTTGTCCTGGATCTT 3012491 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || || ||||||||| ||||| ||||| | Sbjct 3013058 GCCACCACGGAGGCGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGC 3013117 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| | | || || ||||||||||| ||||| || || ||||| ||||||| ||| Sbjct 3013118 AAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 3013177 Query 41755 AACGCTCTCCTTGTCCATGATTTT----TTG-CTTCAACGACGACACAGTGTCGCTCGAC 41809 | || |||||| || ||| || ||| | | | ||| | ||||| ||| Sbjct 3013178 GATGCCCTCCTTATCTTGGATCTTAGCCTTGACATTATCGATG-----GTGTCAGAGGAC 3013232 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| | || || || || || |||| ||||| || || |||||||| Sbjct 3013233 TCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCACAAAGATCTGCAT 3013285 >seq11 Length=26703665 Score = 136 bits (150), Expect = 4e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || ||||| || || ||||||||||||||| ||||| | Sbjct 4117585 GCCACCACGGAGACGGAGGACAAGATGGAGGGTCGACTCCTTCTGAATGTTGTAGTCAGC 4117644 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || |||||||||||||| ||||| || |||||||| ||||||| ||| Sbjct 4117645 AAGGGTGCGTCCTTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGG 4117704 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||| ||| ||| || |||| || | | | |||||| ||||||| Sbjct 4117705 AATACCCTCCTTATCCTGGATCTTCGCCTTC-ACATTGTCGATTGTGTCGGATGACTCCA 4117763 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || | || || ||||| || || || || |||||||| Sbjct 4117764 CCTCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCACAAAGATCTGCAT 4117812 >seq6 Length=36134596 Score = 118 bits (130), Expect = 1e-21 Identities = 100/122 (82%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||||||||| || | |||||| || |||||| ||||||||| ||||| ||||||| Sbjct 8965774 GCCGCCGCGTAGGCGAAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 8965715 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 || ||||| | || || |||||||| |||||||| || |||||||| |||||| |||| Sbjct 8965714 CAGCGTGCGGCCATCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGG 8965655 Query 41754 GA 41755 || Sbjct 8965654 GA 8965653 Score = 105 bits (116), Expect = 6e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | || || || |||||| ||||||||| ||||| ||||||| Sbjct 322657 GCCACCGCGGAGGCGGAGGACGAGGTGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGC 322716 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCG 41750 |||||||| | || || ||||||||||||||||| || |||||||| ||||||| Sbjct 322717 CAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCG 322772 >seq10 Length=24717764 Score = 113 bits (124), Expect = 4e-20 Identities = 100/124 (81%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 ||||||||||| || || | ||| || |||||||| ||||||||| ||||| |||||| Sbjct 13570450 CCGCCGCCGCGGAGGCGAAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCG 13570509 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GC 41751 | || || || |||| || |||||||| |||||||| ||||| ||||| |||||| || Sbjct 13570510 GCCAGCGTCCGGCCGTCCTCCAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGGTCCGGC 13570569 Query 41752 GGGA 41755 |||| Sbjct 13570570 GGGA 13570573 >seq12 Length=20407407 Score = 104 bits (114), Expect = 2e-17 Identities = 97/122 (80%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || | | |||||| || ||||| ||||||||||||||| ||||||| Sbjct 14621487 GCCACCGCGGAGGTGGAGCACCAGGTGAAGCGTCGACTCCTTCTGAATGTTGTAGTCGGC 14621428 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCC-GCGG 41753 |||||||| | || ||||||||||| || ||||| || || ||||| |||||| |||| Sbjct 14621427 CAGGGTGCGGCCATCCTCGAGCTGCTTCCCCGCGAAGATGAGACGCTGCTGGTCCGGCGG 14621368 Query 41754 GA 41755 || Sbjct 14621367 GA 14621366 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/101 (83%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| ||||||| || |||||| | || || ||||||||||||||||| Sbjct 12157666 CTCCTTCTGAATGTTGTAGTCGGCCAGTGTGCGCCCATCTTCCAGCTGCTTGCCGGCGAA 12157607 Query 41731 TATCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCC 41770 ||||| |||||||| || | |||| | || ||||||||| Sbjct 12157606 TATCAAACGCTGTTGATCTGGAGGGATCCCT-TCCTTGTCC 12157567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303930654400