Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 >seq8 Length=29853973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/185 (71%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 151008 CGCCG-TCTTCATGGGCCCCATCTACTACCTGCGGCTGCGGCACCTCACGCAGGACAAGG 151066 ||||| | |||| ||||| | | ||||| |||||| | ||| | | ||||||||| Sbjct 3761988 CGCCGGTGTTCACCGGCCCGACGTTCTACCAGCGGCTCCACCACATGGCCGAGGACAAGG 3761929 Query 151067 CCACGGTGCGCTGCCGCGGCAAGAAGACCAAGCTGATCCGGCAGGCCAACGAGGGCCGCA 151126 || | | || | |||| | | | ||||| |||||| | |||| ||| Sbjct 3761928 TCAAGTTCCGGAACACCGGCCCGGTGCACCCGCTGACGCGGCAGCCGGTGGAGGATCGCC 3761869 Query 151127 AGCGAGGCGGCGGCATCAAGTTCGGCGAGATGGAGCGCGACTGCCTCATCGCGCACGGCG 151186 || ||||||| |||||||||||||||||||||| ||||||||| |||| ||||||| Sbjct 3761868 GCCGGTACGGCGGCGTCAAGTTCGGCGAGATGGAGCGTGACTGCCTCCTCGCCCACGGCG 3761809 Query 151187 CGGCC 151191 | ||| Sbjct 3761808 CCGCC 3761804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608796708680480