Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 127 2e-24 seq2 120 3e-22 seq5 116 4e-21 seq4 113 5e-20 seq3 82.4 9e-11 >seq6 Length=34615992 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | |||| |||||| || || |||||||| || || || || | || || Sbjct 32010591 CACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTACGGCCATCCTC 32010532 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||||||||| ||||| || ||||||||||| | || | || |||||||||| Sbjct 32010531 AAGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 32010472 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | |||||| ||| || || || | |||||||| || Sbjct 32010471 GATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTT 32010412 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| |||||||| ||||| Sbjct 32010411 GCCAGTCAGGGTCTTGACAAAGATCTGCAT 32010382 Score = 125 bits (138), Expect = 8e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| || | ||| |||||| || || ||||| ||||| || || || |||| || Sbjct 32010135 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTC 32010076 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||||||| |||||||| ||||| ||||||||||| | || | || ||||||||| Sbjct 32010075 TAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTG 32010016 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | |||||| || || || |||| ||||||||| | Sbjct 32010015 GATCTTGGCCTTCA-CGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATGGTCT 32009957 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| || ||||| ||||| Sbjct 32009956 TGCCAGTCAGGGTCTTGACGAAGATCTGCAT 32009926 Score = 123 bits (136), Expect = 3e-23 Identities = 144/192 (75%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || |||||||| || || || || |||| || |||||||| |||||||| Sbjct 32009888 TCCTTCTGGATGTTGTAATCGGCAAGGGTACGGCCGTCCTCCAGCTGCTTGCCAGCGAAG 32009829 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 32009828 ATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTT 32009770 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| ||| || || |||| |||||||| ||||| || || ||||| || Sbjct 32009769 GTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 32009710 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 32009709 GAAGATCTGCAT 32009698 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || |||||||| |||||||| Sbjct 32009433 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 32009374 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 32009373 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 32009314 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || || || |||| |||||||||||||| || || ||||| || Sbjct 32009313 GTCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTCAC 32009254 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 32009253 AAAGATCTGCAT 32009242 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||| | ||| | ||| |||||| || || ||||| || ||||| || || |||| || Sbjct 32009679 CACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTC 32009620 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| |||||||| ||||| ||||||||||| | || | || |||||||||| Sbjct 32009619 CAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 32009560 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || |||| ||| | | | ||||| ||| || || || | |||||||| | Sbjct 32009559 GATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCT 32009501 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | ||||| || ||||| ||||| Sbjct 32009500 TTCCAGTCAAGGTCTTCACGAAGATCTGCAT 32009470 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| |||||||||||||| |||| |||| || |||||||| || || || Sbjct 31537794 CTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTACCGTCCTCAAGCTGCTTGCCGGCAAA 31537853 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| |||||||| || | || | | |||||||||| ||| || || | | Sbjct 31537854 GATGAGACGCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACATT 31537913 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | |||||||| || || || | ||||| || Sbjct 31537914 GTCGATCGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCAC 31537973 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 31537974 AAAGATCTGCAT 31537985 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||||| ||| |||||| || || ||||| || || || || || | || || Sbjct 31537548 CACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTACGGCCATCCTC 31537607 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || | ||||||||||| | || | || ||||||||| | Sbjct 31537608 AAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC-T 31537666 Query 43094 GATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 || | || | || | | | | ||| || || || || || | ||| ||||| | Sbjct 31537667 GAATCTTCGCCTTCACATTGTCGATCGTATCAGAAGACTCAACCTCAAGCGTAATGGTCT 31537726 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| |||||||||||||| Sbjct 31537727 TGCCGGTCAGGGTCTTGACAAAGATTTGCAT 31537757 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || | || || |||||||| ||||| || Sbjct 32010345 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAA 32010286 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 32010285 GATGAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATT 32010226 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 32010225 GTCGATCGTGTCCGAAGACTCAACCTCAAGTGTGATGGTCTTGCCGGTCAGGGTCTTGAC 32010166 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 32010165 GAAGATCTGCAT 32010154 >seq1 Length=46096743 Score = 127 bits (140), Expect = 2e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || ||||| || |||||||| || ||||| Sbjct 27626539 CTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGTTCGTCCTCCAGCTGCTTGCCGGCGAA 27626480 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | ||| | | |||||||||| | || |||| | Sbjct 27626479 GATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTT 27626420 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||||||| ||||| |||| ||||||||| || ||||| || ||||| || Sbjct 27626419 CTGGATCGTGTCGCTGCTCTCCACCTCGAGCGTGATGGTCTTCCCCGTCAGGGTCTTCAC 27626360 Query 43172 AAAGATTTGCATTTT 43186 ||||| ||||| || Sbjct 27626359 GAAGATCTGCATCTT 27626345 Score = 109 bits (120), Expect = 6e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| || | ||| |||||| || || ||||| || || || || ||| |||| || Sbjct 12788229 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTC 12788288 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | || | | ||||||||| Sbjct 12788289 CAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTG 12788348 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | ||||| || ||||| || | ||||||||| | Sbjct 12788349 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCT 12788407 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | ||||| || ||||| || ||||| ||||| || Sbjct 12788408 TCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 12788441 >seq2 Length=39559433 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| || || || Sbjct 2779171 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCAAGCTGCTTGCCGGCAAA 2779230 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 2779231 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2779289 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| |||||||| |||| |||||||| ||||| || || ||||| | Sbjct 2779290 TGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTGA 2779349 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 2779350 CAAAGATCTGCAT 2779362 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| |||||||| Sbjct 2778943 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 2779002 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 2779003 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGA-CGT 2779061 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || || || |||| |||||||| ||||| || || ||||| | Sbjct 2779062 TGTCAATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCA 2779121 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 2779122 CGAAGATCTGCAT 2779134 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| || ||||| Sbjct 2779399 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAA 2779458 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 2779459 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2779517 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || ||||| || | ||||| || ||||| || | ||||| | Sbjct 2779518 TGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAATGTCTTCA 2779577 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 2779578 CAAAGATCTGCAT 2779590 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||||||||| || || ||||| || ||||| | || ||||| ||||| ||||| || Sbjct 31556639 TCCTTTTGAATGTTATAGTCAGCGAGTGTCCGGCCATCCTCTAGTTGCTTGCCAGCAAAG 31556698 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| | ||| ||||| | || | | |||||||||| ||| || ||| | | Sbjct 31556699 ATGAGCCTCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGGCTTTAACATTG 31556758 Query 43113 GCCACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | |||||| ||| || ||||| | ||||| || ||||| || | ||||| Sbjct 31556759 TCAATGGTGTCGGAACTC---TCTACATCAAGAGTGATAGTCTTGCCAGTCAAAGTCTTG 31556815 Query 43170 ACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 31556816 ACAAAGATCTGCAT 31556829 Score = 93.3 bits (102), Expect = 5e-14 Identities = 137/193 (71%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| |||| || |||||||| || ||||| Sbjct 2779627 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAA 2779686 Query 43052 T-ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG 43110 ||||| ||||||||||| | || | || |||||| || ||| || |||| Sbjct 2779687 AGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACAT 2779746 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||| || ||||| || | ||||| | Sbjct 2779747 TGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAATGTCTTCA 2779806 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 2779807 CAAAGATCTGCAT 2779819 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || |||||||| || ||||| Sbjct 2778715 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 2778774 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | ||||||||| ||| || || | | Sbjct 2778775 GATCAGACGCTGCTGGTCAGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 2778834 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || || | |||||||| ||||| || || ||||| Sbjct 2778835 GTCGATGGTGTCAGAGCTC---TCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTT 2778891 Query 43169 TACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 2778892 GACAAAGATCTGCAT 2778906 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| || || | || ||||||||||| ||||| || Sbjct 31556410 CTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGTCCATCCTCTAGCTGCTTTCCAGCAAA 31556469 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | |||||| || | || | | |||||||||| ||| || |||| | Sbjct 31556470 GATAAGCCTCTGCTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATT 31556529 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | || || |||| || || || || ||||| || || || || || ||||| Sbjct 31556530 GTCAATTGTATCAGAGCTC---TCAACCTCAACTGTGATCGTCTTTCCTGTAAGGGTCTT 31556586 Query 43169 TACAAAGATTTGCAT 43183 |||||||| ||||| Sbjct 31556587 CACAAAGATCTGCAT 31556601 >seq5 Length=31082981 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||||||||||||||| || |||| || |||||||| || ||||| Sbjct 9801402 CTCCTTCTGAATGTTGTAATCAGCCAGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAA 9801461 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 9801462 GATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC-TGAATCTTCGCCTTCACAT 9801520 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || ||| || || || || | ||| ||||| ||||| || || ||||| | Sbjct 9801521 TGTCGATTGTATCGGAAGACTCGACCTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGA 9801580 Query 43171 CAAAGATTTGCAT 43183 | || || ||||| Sbjct 9801581 CGAAAATCTGCAT 9801593 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| |||||||| || || |||| || |||||||| || ||||| Sbjct 9801174 CTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAA 9801233 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| || || | ||| Sbjct 9801234 GATGAGGCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTCA-CGT 9801292 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || || || || | |||||||| ||||| |||| ||||| | Sbjct 9801293 TGTCGATTGTGTCTGATGACTCGACCTCTAATGTGATGGTCTTGCCAGTTAAGGTCTTGA 9801352 Query 43171 CAAAGATTTGCAT 43183 |||| || ||||| Sbjct 9801353 CAAAAATCTGCAT 9801365 Score = 105 bits (116), Expect = 8e-18 Identities = 146/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 42986 TGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACC 43045 |||| |||||| || || ||||| || || || || || | || || |||||||| || Sbjct 3229942 TGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCC 3229883 Query 43046 AGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTT 43105 ||||| ||||| ||||||||||||| || | | ||||||||| ||| || || Sbjct 3229882 GGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTT 3229823 Query 43106 GAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCG 43164 | ||| | | | ||||| || ||||| || | ||||||||| || ||||| || | Sbjct 3229822 CA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGG 3229764 Query 43165 TCTTTACAAAGATTTGCATTTT 43186 |||| || ||||| ||||| || Sbjct 3229763 TCTTCACGAAGATCTGCATCTT 3229742 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| ||||| || | || || |||||||| ||||| || Sbjct 26219414 CTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAA 26219355 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| |||||| |||| | Sbjct 26219354 GATGAGACGCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTT 26219295 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || || || || || || | || ||||| ||||| || || ||||| || Sbjct 26219294 ATCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCAC 26219235 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 26219234 GAAGATCTGCAT 26219223 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/218 (70%), Gaps = 11/218 (5%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| ||||| ||| ||||| ||||| |||||||| || | || || | Sbjct 9800931 ACGGAGCACCAGGTGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGCTAAGGTGCGGCC 9800990 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || || || |||||||| || | || | || ||||| Sbjct 9800991 ATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCCTTCCTT 9801050 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCAC-CGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | |||| || ||| | || |||||| ||| || || || | || | Sbjct 9801051 GTCC-TGAATCTTTGCTTTCACGTTGTCAATCGTGTCTGACGACTCAACCTCCAGGGTAA 9801109 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||||||||| | | ||||||||||||||| Sbjct 9801110 TGGTTTTGCCGG---------TCACAAAGATTTGCATT 9801138 Score = 93.3 bits (102), Expect = 5e-14 Identities = 163/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 42951 TATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAA 43010 || || || || || | || | ||||| || | ||| |||||| ||||| ||||| Sbjct 26220367 TACTGACCACCCCTGAGGCGGAGCACCAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAG 26220308 Query 43011 TCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCG 43070 || || || || || | || || |||||||| |||||||| || || ||||||||||| Sbjct 26220307 TCGGCAAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCC 26220248 Query 43071 GCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTC 43127 | || | || ||||||||| ||| || || | | | | ||||| |||| Sbjct 26220247 GGGGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTCACATTATCGATGGTGTCGGAGCTC 26220188 Query 43128 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || | || ||||| ||||| || || ||||| |||||||| ||||| Sbjct 26220187 ---TCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 26220135 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| ||||| || Sbjct 26219642 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAA 26219583 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| ||| || | | Sbjct 26219582 GATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTAACATT 26219523 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || || || ||||| || | ||||| || || || || | ||||| || Sbjct 26219522 GTCAATGGTATCAGAGGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAAGGTCTTGAC 26219463 Query 43172 AAAGATTTGCAT 43183 ||| |||||||| Sbjct 26219462 AAATATTTGCAT 26219451 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | || |||||| || || ||||| || || || || || | || || Sbjct 26220116 CACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTC 26220057 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||||||||||||||| ||||||| ||||||||| | || | || |||||| ||| Sbjct 26220056 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 26219997 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 ||| || || | ||| | | | ||||| |||| || || || | || || | Sbjct 26219996 GATCTTCGCCTTCA-CGTTGTCGATGGTGTCTGAGCTC---TCAACCTCCAGGGTAATAG 26219941 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | ||||| || || ||||| || || || |||||| Sbjct 26219940 TCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 26219906 >seq4 Length=33711903 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 ||||| ||| |||||| || || || ||||| || ||||| ||| | || || |||||| Sbjct 30264485 TGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCAAGAGTACGCCCATCCTCAAGCTGC 30264426 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || |||||||| || || ||||||||||| | || | || |||||||||| ||| | || Sbjct 30264425 TTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC-TGAATCTT 30264367 Query 43101 TG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | || | | | | ||| ||| || || || || | |||||||| ||||| || Sbjct 30264366 AGCCTTCACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGT 30264307 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| ||||| || ||||| Sbjct 30264306 GAGGGTCTTAACAAATATCTGCAT 30264283 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||| ||||| ||| |||||| || || || || ||||| || || || |||| || Sbjct 30264719 ACCAGGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCGTCCTCA 30264660 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| ||||| ||||||||||| | || | || |||||| ||| | Sbjct 30264659 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGGGGGATGCCCTCCTTATCCTGG 30264600 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | |||||| ||| || || || | || ||||| ||| Sbjct 30264599 ATCTTGGCCTTCACATTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTG 30264540 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| || || |||||||| Sbjct 30264539 CCGGTGAGGGTCTTCACGAATATTTGCAT 30264511 Score = 100 bits (110), Expect = 3e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || || || || ||||| || || || | || || |||||| Sbjct 30265169 TGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCATCCTCGAGCTGC 30265110 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || ||||| ||||| ||||||||||| | || | || |||||||||| ||| || Sbjct 30265109 TTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTGTCCTGGATCTTG 30265050 Query 43101 TGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 || | ||| | | | ||||| || || || || | |||||||| ||||| || Sbjct 30265049 GCCTTCA-CGTTGTCGATGGTGTCAGAGGACTCAACCTCCAGAGTGATGGTCTTGCCAGT 30264991 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| Sbjct 30264990 GAGGGTCTTCACGAAGATCTGCAT 30264967 >seq3 Length=38925377 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | || || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 4867916 AAAAAATATCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 4867975 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 4867976 TCACCACTATACTAC 4867990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571817514227360