Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 5e-12 >seq5 Length=31082981 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||| | ||||| || | || ||| |||| || ||| || Sbjct 9802049 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTCGAGGTTGAGTCCTCA 9801990 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | ||||| |||||| ||||| || || || || || || ||| Sbjct 9801989 GATACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCACCTGACCAA 9801930 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | | |||||||||||||| |||| | | | | | ||||| ||| Sbjct 9801929 CAGCGCCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACCCTTGCAGATTACAAC 9801870 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| ||||| || || Sbjct 9801869 ATTCAGAAAGAGTCCAC 9801853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935937121860