Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6 105 5e-18 seq1 102 7e-17 seq5 100 2e-16 seq2 98.7 8e-16 seq4 95.1 1e-14 >seq6 Length=34615992 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || || | ||| || ||||||||||| || ||||||||||||||| Sbjct 32009696 CCTCCCCTGAGCCTGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCC 32009637 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||||| || ||||| || | || || ||||| ||||| || Sbjct 32009636 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGG 32009577 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| | ||| Sbjct 32009576 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACGTTGTCAATGGTGTCAGACGACTCGA 32009519 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||||||| ||||| |||| || || || || |||||||| Sbjct 32009518 CCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 32009470 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||| || || | ||| | | ||| Sbjct 32010593 AGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTACGGCCATCC 32010534 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | || || ||||| |||||| || | |||||| ||||| Sbjct 32010533 TCAAGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 32010474 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||||| | ||| || | ||||||||| Sbjct 32010473 TGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTGATGGTC 32010414 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| |||||||| Sbjct 32010413 TTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 32010382 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | || || || |||| || || || |||||||| || ||||||||||||||| Sbjct 32009468 CCTCCCCTGAGTCTGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCC 32009409 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || || ||||| ||||| || Sbjct 32009408 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGG 32009349 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | ||||| || ||| Sbjct 32009348 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTGACATTGTCAATGGTGTCCGAGGACTCAA 32009291 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||||||| ||||| || || || ||||| |||||||| Sbjct 32009290 CCTCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 32009242 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||||||||||| || ||||||||||| || | ||| | Sbjct 32010143 AGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGG 32010084 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || ||||| || | || || ||||| |||||| || | ||| || Sbjct 32010083 CCGTCCTCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCC 32010024 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | ||||| || ||| || | | Sbjct 32010023 TTGTCCTGGATCTTGGC--CTTCACGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGCG 32009966 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || || ||||| || ||||| || |||||||| Sbjct 32009965 TGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 32009926 Score = 98.7 bits (108), Expect = 8e-16 Identities = 155/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || |||| || || ||||||||||| || ||||||||||| || | ||| | Sbjct 32010371 AGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGG 32010312 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 | ||||||| || ||||| ||| | || || ||||| ||||| || | ||||| Sbjct 32010311 CCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCTGGGGGGATACCCTCC 32010252 Query 16838 TTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGG 16895 ||||| || || || |||||| | | | | ||||| | ||| || | | Sbjct 32010251 TTGTCCTGGATCTTGGC--CTTCACATTGTCGATCGTGTCCGAAGACTCAACCTCAAGTG 32010194 Query 16896 TGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||||| || |||||||| || ||||| || |||||||| Sbjct 32010193 TGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 32010154 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||| || |||| ||| | ||||||| | || Sbjct 31537783 TGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTACCGTCCTCAAGCTGC 31537842 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| || || ||| | ||||| ||||| || | | Sbjct 31537843 TTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGGATCTTC 31537902 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | ||||| || ||| || | |||||||| ||||| ||| Sbjct 31537903 GCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCTGTC 31537962 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| |||||||| Sbjct 31537963 AAGGTCTTCACAAAGATCTGCAT 31537985 >seq1 Length=46096743 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||||| | ||| ||||| Sbjct 12788227 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCC 12788286 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| || | || || ||||| |||||| || | || || ||||| Sbjct 12788287 TCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCC 12788346 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| || |||| |||| |||||||| Sbjct 12788347 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTC 12788406 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||| || || || || |||||||| ||| Sbjct 12788407 TTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 12788442 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/210 (71%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || |||||||||||||||| || ||||||||| || Sbjct 27626550 TGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGTTCGTCCTCCAGCTGC 27626491 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-CGGCAATTTG 16851 ||||| || | || |||||||| |||||| || | ||||| |||| | ||| || Sbjct 27626490 TTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTGCACCTT- 27626432 Query 16852 CTGCTTCAC---CTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCC 16908 | ||| || |||| | ||||||| | |||| || | |||||||| || || Sbjct 27626431 CGCCTTGACGTTCTGG---ATCGTGTCGCTGCTCTCCACCTCGAGCGTGATGGTCTTCCC 27626375 Query 16909 GGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 ||||| || || || || |||||||| || Sbjct 27626374 CGTCAGGGTCTTCACGAAGATCTGCATCTT 27626345 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 |||||||| |||||||| || |||||||||||||| | || | ||||||||| || Sbjct 27636150 TGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGGCTAGCGTGCAGCCGTCCTCCAGCTGC 27636091 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || |||||||| |||| | || |||||||| ||||| || | Sbjct 27636090 TTGCCGGCGAAGATGAGCCGCTGCTGGTGCGGCGGGACGCCCTCCCTGTCGTGGATCCTC 27636031 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | || | ||||| | || || | |||||||| | ||| || Sbjct 27636030 GCCTTGACGTTCTCGACCGAGTCGCAGCTGTCGACCTCGAGCGTGATGGTCCTCCCGTTC 27635971 Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938 || || || || || |||||||| || Sbjct 27635970 AGAGTCTTCACGAATATCTGCATCTT 27635945 >seq5 Length=31082981 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 16718 AGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTG 16777 ||||| || || | || || ||||||||||| || |||||||| || |||| || Sbjct 9801376 AGCCTTAGCACGAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCCAGAGTGCGT 9801435 Query 16778 GCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCT 16837 ||||||| | || ||||| || | || || ||||| |||||| ||| | |||||| Sbjct 9801436 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCC 9801495 Query 16838 TTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTG 16897 ||||| ||| | | |||||| | | | | || ||| | ||| || | || Sbjct 9801496 TTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCGGAAGACTCGACCTCAAGCGTA 9801555 Query 16898 ATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || |||||||| || ||||| ||||||||||| Sbjct 9801556 ATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 9801593 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| | ||||| || || | || || |||||||| || || ||||||||||| ||| Sbjct 9801595 CCTCCCCTCAGCCTAAGCACAAGGTGTAGAGTGGACTCTTTCTGAATGTTGTAGTCTGCC 9801654 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || ||||| || | ||||| |||||||| || || Sbjct 9801655 AAGGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGTTGATCTGGGGGG 9801714 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || ||||| |||||| | | | | ||||| || ||| Sbjct 9801715 ATACCCTCCTTGTCCTGGATCTTTGC--CTTCACGTTGTCGATCGTGTCTGAGGACTCAA 9801772 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||| ||||| |||| || || ||||| ||||||||| Sbjct 9801773 CCTCCAAAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATT 9801822 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| || | ||||| | || Sbjct 26219653 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGC 26219594 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || || ||||| ||||| || | |||||| ||||| || ||| Sbjct 26219593 TTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTT 26219534 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | || || || |||| || | |||||| || ||||||| Sbjct 26219533 GC--CTTAACATTGTCAATGGTATCAGAGGACTCCACCTCAAGGGTGATAGTCTTTCCGG 26219476 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || |||||||| || ||||| Sbjct 26219475 TCAAGGTCTTGACAAATATTTGCAT 26219451 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || |||||||||||||| | ||| | | ||||| | || Sbjct 3229947 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGC 3229888 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || || ||||| ||||| || | || || ||||| || || Sbjct 3229887 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCCTGGATCTTG 3229828 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || |||||| | | | | ||||| || |||| |||| |||||||| || || | Sbjct 3229827 GC--CTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCG 3229770 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| || || || || |||||||| ||| Sbjct 3229769 TCAGGGTCTTCACGAAGATCTGCATCTTG 3229741 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||||| | ||| | | || Sbjct 26220346 AGCACCAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCT 26220287 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| || | || || ||||| |||||| || | ||| || ||||| Sbjct 26220286 TCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCC 26220227 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | |||||| | ||| |||| || |||| Sbjct 26220226 TGGATCTTAGC--CTTCACATTATCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGG 26220169 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || |||||||| |||||||| Sbjct 26220168 TCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 26220135 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||||| | ||| | | ||| Sbjct 26220118 AGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCC 26220059 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || || || | || || | ||| |||||| || | |||||| || || Sbjct 26220058 TCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCC 26219999 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | | |||||| | | | | ||||| | ||| |||| ||| || || Sbjct 26219998 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTC 26219939 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || || || || ||||| |||||||||||| Sbjct 26219938 TTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 26219906 >seq2 Length=39559433 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||| || | ||| || | ||||| | || Sbjct 2779160 TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCAAGCTGC 2779219 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| ||| | || || ||||| |||||| || | |||||| ||||| || || Sbjct 2779220 TTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTG 2779279 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | ||||| | ||| || | ||||||||| || |||| Sbjct 2779280 GC--CTTGACGTTGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGG 2779337 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||||||| |||||||| Sbjct 2779338 TCAGTGTCTTGACAAAGATCTGCAT 2779362 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/206 (71%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| || ||||||||| || Sbjct 2779616 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGC 2779675 Query 16793 TTGCCCGC-ATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATT 16849 ||||| || | | || || ||||| |||||| || | |||||| || || || || Sbjct 2779676 TTGCCGGCGAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTT 2779735 Query 16850 TGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCG 16909 || ||| || | | | | ||||| || |||| || | |||||| || || || Sbjct 2779736 AGC--CTTGACATTGTCGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCA 2779793 Query 16910 GTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || ||||| |||||||| Sbjct 2779794 GTCAATGTCTTCACAAAGATCTGCAT 2779819 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| || | ||| || | ||||||| || Sbjct 2779388 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGC 2779447 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || | || || ||||| |||||| || | |||||| ||||| || || Sbjct 2779448 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTG 2779507 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | || || | |||| || | |||||| || || |||| Sbjct 2779508 GC--CTTGACGTTGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGG 2779565 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 ||| || || ||||| |||||||| Sbjct 2779566 TCAATGTCTTCACAAAGATCTGCAT 2779590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/214 (69%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||||| | ||| | | ||| Sbjct 2778695 AGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCC 2778754 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| || | || || ||||| ||||| || | || || ||||| Sbjct 2778755 TCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCCTTGTCC 2778814 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | | ||||| | ||| |||| |||||||| Sbjct 2778815 TGGATCTTGGC--CTTCACATTGTCGATGGTGTCAGAGCTCTCAACCTCCAGGGTGATGG 2778872 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || |||||||| |||||||| Sbjct 2778873 TCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2778906 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | ||| || ||||| ||||| || ||||||||||| ||| Sbjct 31555919 CCACCGCGGAGGCGCAGGACAAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCC 31555978 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || || || ||| | || |||| ||||||||| || Sbjct 31555979 AAGGTACGCCCATCCTCTAGCTGCTTCCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGG 31556038 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || ||| || | | | | || || | ||| Sbjct 31556039 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTAACATTGTCGATGGTATCAGAGCTCTCGA 31556096 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||| || ||||| || || || |||||||| |||||||| Sbjct 31556097 CTTCAAGTGTGATAGTCTTTCCAGTTAGGGTCTTGACAAAGATCTGCAT 31556145 >seq4 Length=33711903 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||||| | |||| ||||||||||| || ||||| || || || Sbjct 30264509 CCTCCACGAAGGCGGAGTACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAATCCGCA 30264450 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||| | || ||||| || | ||||| ||||| |||||| ||| Sbjct 30264449 AGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCGGAGGG 30264390 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| ||| | |||||| | | | | || ||| || ||| Sbjct 30264389 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACTCAACC 30264330 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || || || || || || ||||| |||||||| Sbjct 30264329 TCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACAAATATCTGCAT 30264283 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | ||| || | ||||| ||||||||||| || ||||||||||| || Sbjct 30264965 CCTCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCA 30264906 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||| | || ||||| ||| | || || ||||| || || || Sbjct 30264905 AGGGTACGTCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCTGGTGGA 30264846 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 30264845 ATACCCTCCTTGTCCTGGATCTTGGC--CTTCACATTGTCGATTGTGTCAGAGGACTCAA 30264788 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||||||| || ||||| || || || || || |||||||| Sbjct 30264787 CCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 30264739 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| || | ||||| ||||||||||| || ||||| ||||| || Sbjct 30265193 CCACCACGGAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCAGCA 30265134 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| || | || || ||||| ||||| ||| Sbjct 30265133 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGG 30265074 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||| ||||| || || || |||||| | | | | ||||| || ||| Sbjct 30265073 ATGCCCTCCTTGTCCTGGATCTTGGC--CTTCACGTTGTCGATGGTGTCAGAGGACTCAA 30265016 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| || || || || || || || || |||||||| Sbjct 30265015 CCTCCAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 30264967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087940755880