Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq6 136 3e-27 seq2 134 1e-26 seq5 131 1e-25 seq4 109 5e-19 >seq6 Length=34615992 Score = 136 bits (150), Expect = 3e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 |||| ||||||| || ||||| || || | ||||| || || |||| || || || || Sbjct 31538220 TGTACAGATGCAGATCTTTGTGAAGACACTTACCGGCAAGACCATCACCCTCGAGGTTGA 31538161 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 | | ||||| | ||| || |||| || ||||| ||||||||||| |||||||| Sbjct 31538160 GTCGTCTGATACAATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCACC 31538101 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 || || |||||||| || ||||| ||||| || |||||||| |||||| || | || Sbjct 31538100 TGACCAGCAACGTCTCATCTTTGCTGGCAAGCAACTAGAGGATGGTCGCACCCTCGCGGA 31538041 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 ||||||||| || || || |||||| Sbjct 31538040 TTACAACATCCAGAAGGAGTCCACC 31538016 Score = 113 bits (124), Expect = 4e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | ||||| ||||| |||| || || || || || Sbjct 32009240 AGATGCAGATCTTTGTGAAGACCCTCACCGGCAAAACCATCACCCTCGAGGTTGAGTCCT 32009299 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| | ||| || |||| || || || ||||||||||| || || || || | Sbjct 32009300 CGGACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACC 32009359 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || || || ||||| ||| | |||||| ||||||| | |||| |||| Sbjct 32009360 AGCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCCGACTACA 32009419 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || || ||| Sbjct 32009420 ACATCCAGAAGGAGTCTACC 32009439 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || |||||||||| || || || | Sbjct 31537985 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTTGAGGTCGAGTCCTCG 31537926 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || ||||||||||| || || || ||||| Sbjct 31537925 GACACGATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGAATCCCTCCTGATCAG 31537866 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | ||||| | ||| | | ||||||||| Sbjct 31537865 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGTAGGACCCTGGCTGATTACAAC 31537806 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || || |||||| Sbjct 31537805 ATTCAGAAGGAGTCCACC 31537788 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || || |||| ||||| || || | | Sbjct 32010381 GATGCAGATCTTTGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGTCGTC 32010440 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| || | ||| || | || || || || ||||||||||| ||||| || || || Sbjct 32010441 CGACACTATTGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 32010500 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || ||||| |||||||| || || ||| | |||||| ||| ||| | | |||||||| Sbjct 32010501 GCAGCGTCTGATATTTGCTGGTAAGCAGCTTGAGGATGGCCGTACCCTTGCGGATTACAA 32010560 Query 22398 CATTCAAAAAGAATCCAC 22415 ||| || || || ||||| Sbjct 32010561 CATCCAGAAGGAGTCCAC 32010578 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| ||||| || || | | Sbjct 32010154 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACACTTGAGGTTGAGTCTTCG 32010213 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || |||||||||||||| || || || || Sbjct 32010214 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 32010273 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | |||||| ||||||| | | || |||||| Sbjct 32010274 CAGCGTCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACAAC 32010333 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 32010334 ATCCAGAAGGAGTCCACC 32010351 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| ||||| || || | | Sbjct 32009470 ATGCAGATCTTCGTGAAGACCTTGACTGGAAAGACCATCACCCTTGAGGTCGAGTCGTCT 32009529 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || || || || Sbjct 32009530 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 32009589 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| ||||||| | |||| |||||| Sbjct 32009590 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTGGCCGACTACAAC 32009649 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || || || |||||| | ||| Sbjct 32009650 ATCCAGAAGGAGTCCACCCTCCAT 32009673 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || | | Sbjct 32009698 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCT 32009757 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| || || || || || Sbjct 32009758 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 32009817 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | ||||| ||| ||| | ||||||||||| Sbjct 32009818 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGTACCCTTGCCGATTACAAC 32009877 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 || || || ||||||||| | ||| Sbjct 32009878 ATCCAGAAGGAATCCACCCTCCAT 32009901 >seq2 Length=39559433 Score = 134 bits (148), Expect = 1e-26 Identities = 177/244 (73%), Gaps = 1/244 (0%) Strand=Plus/Minus Query 22203 TTATACATTTGTAA-AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTC 22261 |||| ||| || | ||||||| || ||||| || ||||| || || || || |||||| Sbjct 31556846 TTATTCATATGGAGCAGATGCAGATCTTTGTCAAGACTTTGACTGGCAAGACTATCACTC 31556787 Query 22262 TTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGG 22321 |||| || || | |||| ||| | ||| || | ||| || || || |||||||||| Sbjct 31556786 TTGATGTAGAGAGTTCCGACACCATTGACAATGTTAAAGCCAAGATCCAGGACAAGGAGG 31556727 Query 22322 GTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCA 22381 |||| || || || ||||| | || || ||||| ||||| || |||||||| ||| | Sbjct 31556726 GTATCCCCCCAGACCAACAGAGGCTCATCTTTGCTGGCAAGCAACTAGAGGATGGCCGGA 31556667 Query 22382 CCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCG 22441 | || | || || ||||||||||| ||||||||| | || | ||| | || ||| | | Sbjct 31556666 CACTCGCTGACTATAACATTCAAAAGGAATCCACCCTCCACCTTGTTCTTCGCTTGAGGG 31556607 Query 22442 GAGG 22445 | || Sbjct 31556606 GTGG 31556603 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || ||| | || || || || | ||||| |||||||| | | | Sbjct 31556374 GATGCAGATCTTTGTGAAGACTCTGACTGGCAAGACCATAACTCTGGAAGTGGAGAGCTC 31556315 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || ||| | ||| || |||| |||||| || ||||||||||| || ||||| || || Sbjct 31556314 TGACACCATCGACAATGTCAAGGCAAAAATCCAGGACAAGGAGGGCATCCCACCTGACCA 31556255 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || || || | |||||| ||||| | |||||||||| Sbjct 31556254 GCAGAGGCTCATCTTTGCTGGGAAGCAACTGGAGGATGGGCGCACATTGGCCGATTACAA 31556195 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||| || || || ||| | ||||| || | || | || ||||| Sbjct 31556194 CATTCAGAAGGAGTCTACCCTTCATTTGGTCCTCCGTCTTCGTGGAGG 31556147 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || |||| || || || |||| |||||||| || | | | Sbjct 31556146 GATGCAGATCTTTGTCAAGACCCTAACTGGAAAGACTATCACACTTGAAGTCGAGAGCTC 31556087 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | ||| || | || || || || ||||||||||| || ||||| || || Sbjct 31556086 TGATACCATCGACAATGTTAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCAGACCA 31556027 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | || || ||||| || || ||| |||||||| || ||| | | || ||||| Sbjct 31556026 ACAGAGGCTCATCTTTGCTGGGAAGCAGCTAGAGGATGGGCGTACCTTGGCAGACTACAA 31555967 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || || |||||||| | ||| | || |||| | ||||| ||| Sbjct 31555966 CATCCAGAAGGAATCCACTCTTCATCTTGTCCTGCGCCTCCGCGGTGGT 31555918 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || || || || || || ||||||| || || || | | || Sbjct 2778678 ATGCAGATCTTCGTTAAGACCTTGACTGGGAAGACCATCACTCTGGAGGTTGAGAGCTCC 2778619 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || ||||||||||| ||||| || || || Sbjct 2778618 GACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACCAG 2778559 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | |||||| |||||| || |||| |||||| Sbjct 2778558 CAGCGTCTAATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTCGCCGACTACAAC 2778499 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 2778498 ATCCAGAAGGAGTCCACC 2778481 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || |||||| | | Sbjct 2779362 ATGCAGATCTTTGTCAAGACACTGACCGGCAAGACCATCACCCTCGAGGTGGAATCTTCT 2779303 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || ||||||||||| ||||| || || || Sbjct 2779302 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2779243 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| | | ||| || | || |||||| Sbjct 2779242 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCAGGACCCTCGCTGACTACAAC 2779183 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || || ||| Sbjct 2779182 ATCCAGAAGGAGTCGACC 2779165 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || ||||| || || |||| ||||| ||||| | | Sbjct 2779590 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCT 2779531 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| || || || || || Sbjct 2779530 GATACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 2779471 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | |||||| | | ||| | | || |||||| Sbjct 2779470 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAAC 2779411 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 2779410 ATCCAGAAGGAGTCCACC 2779393 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | || || || ||| |||| |||| || || | | | Sbjct 31556602 GATGCAGATCTTTGTGAAGACCCTTACAGGAAAGACGATCACAGTTGAGGTTGAGAGCTC 31556543 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | ||| || |||| || || || |||||||||||||| ||||| ||||| Sbjct 31556542 TGATACAATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCACCTGATCA 31556483 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | ||||| ||||| || || ||| |||||||| ||||| | | || ||||| Sbjct 31556482 GCAGAGGCTTATCTTTGCTGGAAAGCAGCTAGAGGATGGACGCACATTGGCTGACTACAA 31556423 Query 22398 CATTCAAAAAGAATCCAC 22415 ||| || || || || || Sbjct 31556422 CATCCAGAAGGAGTCTAC 31556405 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| || || || || | | Sbjct 2779134 ATGCAGATCTTCGTGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCGAGTCTTCT 2779075 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| | |||| || || || ||||||||||| ||||| || || || Sbjct 2779074 GATACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2779015 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || || ||||| ||| | |||||| | | ||| || | || |||||| Sbjct 2779014 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTCGCTGACTACAAC 2778955 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 2778954 ATCCAGAAGGAGTCCACC 2778937 >seq5 Length=31082981 Score = 131 bits (144), Expect = 1e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 22212 TGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGA 22271 |||| ||||||| || ||||| || || | || || || || | || || || || || Sbjct 9802056 TGTACAGATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTCGAGGTTGA 9801997 Query 22272 AACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC 22331 || | ||||| | ||| | |||| || ||||| |||||||||||||||||||| Sbjct 9801996 GTCCTCAGATACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCACC 9801937 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 || ||||| || || || ||||| ||||| || | |||||| ||||||| | | || Sbjct 9801936 TGACCAACAGCGCCTCATCTTTGCGGGCAAGCAACTCGAGGATGGCCGCACCCTTGCAGA 9801877 Query 22392 TTACAACATTCAAAAAGAATCCACC 22416 |||||||||||| ||||| |||||| Sbjct 9801876 TTACAACATTCAGAAAGAGTCCACC 9801852 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || || ||||| || || |||| ||||| ||||| || | Sbjct 26219451 ATGCAAATATTTGTCAAGACCTTGACCGGAAAGACTATCACCCTTGAGGTGGAGTCCTCT 26219510 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || ||| || || ||||||||||| ||||| || || || Sbjct 26219511 GATACCATTGACAATGTTAAGGCAAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAG 26219570 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||| ||||| ||| | |||||| | | ||| | | || |||||| Sbjct 26219571 CAGCGTCTGATCTTTGCTGGCAAGCAGCTTGAGGATGGCAGGACCCTTGCTGACTACAAC 26219630 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 26219631 ATCCAGAAGGAGTCCACC 26219648 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || || || || || || ||||| | || || || || | Sbjct 9801821 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTTTGGAGGTTGAGTCCTCA 9801762 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||| || || |||||||||||||| || || |||||| Sbjct 9801761 GACACGATCGACAACGTGAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCAGATCAA 9801702 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || ||||| ||| | |||||| || ||| | | || |||||| Sbjct 9801701 CAGCGTCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGGACCTTGGCAGACTACAAC 9801642 Query 22399 ATTCAAAAAGAATCCACCATACA 22421 ||||| ||||| ||||| |||| Sbjct 9801641 ATTCAGAAAGAGTCCACTCTACA 9801619 Score = 107 bits (118), Expect = 2e-18 Identities = 169/242 (70%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 22204 TATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTT 22263 |||||||| | ||||||| || || || || ||| | || || || || | || ||| Sbjct 26219208 TATACATTCCTGCAGATGCAGATCTTCGTGAAGACTCTCACTGGCAAGACCATAACCCTT 26219267 Query 22264 GAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGT 22323 || || || || | |||||| | || | |||| ||||| || ||||||||||| Sbjct 26219268 GAGGTTGAGTCCTCGGATACCATTGATAACGTCAAGGCCAAAATCCAGGACAAGGAGGGA 26219327 Query 22324 ATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACC 22383 || || || || || || ||||| || ||||| ||||| ||| | || ||| |||||| Sbjct 26219328 ATCCCTCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAGCAGCTCGAAGATGGCCGCACT 26219387 Query 22384 GTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGA 22443 | | || |||||||| || || || |||||| | ||| | || | || | || ||| Sbjct 26219388 CTTGCTGACTACAACATCCAGAAGGAGTCCACCCTTCATCTTGTCCTCCGCCTCCGGGGA 26219447 Query 22444 GG 22445 || Sbjct 26219448 GG 26219449 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| ||||| | || || || || || | | || || | ||| | | ||| | Sbjct 9801122 ACCGGCAAAACCATTACCCTGGAGGTTGAGTCGTCAGACACGATTGACAACGTGAAAGCA 9801063 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| |||||||| || ||||| || ||||| || || || || ||||| ||||| Sbjct 9801062 AAGATTCAGGACAAGGAAGGCATTCCCCCGGATCAGCAGCGCCTGATCTTTGCTGGCAAG 9801003 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||||||| | | |||||||||||||| || |||||||| Sbjct 9801002 CAGCTCGAGGATGGCCGCACCTTAGCAGATTACAACATTCAGAAGGAATCCAC 9800950 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || || | ||||| || || | || ||||| || || | || Sbjct 9801593 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATTACGCTTGAGGTCGAGTCTTCC 9801534 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | || || ||||| ||||||||||| || || || || || Sbjct 9801533 GATACAATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 9801474 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||||| | | ||||||||| Sbjct 9801473 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACTCTGGCTGATTACAAC 9801414 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || ||||| Sbjct 9801413 ATTCAGAAGGAGTCCAC 9801397 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || ||| | || || || || | ||||| || || || | | || Sbjct 26220135 ATGCAGATCTTTGTCAAGACTCTCACTGGCAAGACCATTACTCTGGAGGTTGAGAGCTCC 26220194 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || | || || || || |||||||| || || || || || || Sbjct 26220195 GACACCATCGATAATGTGAAGGCTAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAG 26220254 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | || ||| ||| ||| | |||| |||||| Sbjct 26220255 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTACCCTTGCCGACTACAAC 26220314 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || ||||| Sbjct 26220315 ATTCAGAAGGAGTCCAC 26220331 >seq4 Length=33711903 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | ||||| || || |||| || || || || || | Sbjct 30264739 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCCTCT 30264798 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || | || || || || |||||||||||||||||||| ||||| Sbjct 30264799 GACACAATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGATCAG 30264858 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | |||||| || ||| | | || |||||| Sbjct 30264859 CAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGATGGACGTACCCTTGCAGACTACAAC 30264918 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | || | || |||| | || |||||| Sbjct 30264919 ATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGGT 30264966 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || |||||||| || | || || || || |||| | || || || || Sbjct 30264281 AGATGCAGATATTTGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTCCT 30264340 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 ||||||| | ||| || | || || ||||| ||||||||||| || || || || | Sbjct 30264341 CCGATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACC 30264400 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || ||||| || || ||||| ||| | |||||| || || | | ||||| | Sbjct 30264401 AGCAGCGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTTGCGGATTATA 30264460 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || || || |||||| Sbjct 30264461 ACATCCAGAAGGAGTCCACC 30264480 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || ||||||| || || || || | Sbjct 30264967 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAGTCCTCT 30265026 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | | || || || || ||||||||||| || || || || || Sbjct 30265027 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 30265086 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| ||||||| | | || || ||| Sbjct 30265087 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCTGACTATAAC 30265146 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 30265147 ATCCAGAAGGAGTCCACC 30265164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727938614780