Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq6 143 6e-29 seq1 143 6e-29 seq5 140 8e-28 seq2 127 5e-24 seq4 116 9e-21 seq9 86.0 1e-11 >seq6 Length=34615992 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| || || || || || | ||| || || ||||| || ||||| || Sbjct 32010152 CCACCCCTGAGCCTGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 32010093 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| |||| || || || |||||||| |||||||| || ||| Sbjct 32010092 AGGGTGCGGCCGTCCTCTAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGG 32010033 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || |||||||| || || | || || || || Sbjct 32010032 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGTCTGAGGACTCGACC 32009973 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 32009972 TCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCAT 32009926 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| || || || || |||| ||| || || ||||| || ||||| || Sbjct 32010380 CCACCCCTGAGCCTGAGAACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 32010321 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| |||||||| || |||||| Sbjct 32010320 AGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGG---TCTGGG 32010264 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || || ||||| || || || | || || || Sbjct 32010263 GGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCCGAAGACTCA 32010204 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| |||||||| ||||||||||| |||||||| Sbjct 32010203 ACCTCAAGTGTGATGGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 32010154 Score = 107 bits (118), Expect = 5e-18 Identities = 141/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || || || || || || || || | || || || || || Sbjct 32010572 TCCTTCTGGATGTTGTAATCCGCAAGGGTACGGCCATCCTCAAGCTGCTTACCAGCAAAT 32010513 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || || ||| || || || || |||||||| ||||| ||||| Sbjct 32010512 ATCAGACGCTGCTG---GTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACA 32010456 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| ||| ||| || || || || ||||| ||||| || ||||| |||||| Sbjct 32010455 TTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTG 32010396 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 32010395 ACAAAGATCTGCAT 32010382 Score = 102 bits (112), Expect = 2e-16 Identities = 128/173 (74%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| | ||| ||||||| || || ||||| ||||| || || || | ||| Sbjct 934000 TCGGGATGAACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCA 934059 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| ||||| | |||| |||||||| ||| || || |||| || ||||| || Sbjct 934060 TGGCGCTCGGATGCAAGAAGATGTACAATGTCGCC-AACCCGTTCGACTGGATGGAGCTC 934118 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || || || | || ||||| ||||||||||| ||||||||| ||||||| || Sbjct 934119 ATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGCGACTACCA 934171 Score = 98.7 bits (108), Expect = 2e-15 Identities = 127/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| | ||| ||||||| || || ||||| ||||| || || || || ||| Sbjct 8272867 TCGGCATGAACGGCGACCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCA 8272808 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAAT-TCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 ||| ||||| | |||| ||||||| ||| || || |||| || ||||| || Sbjct 8272807 TGGCGCTCGGCTGCAAGAAGATGTACAACGTCGCC-AACCCTTTCGACTGGATGGAGCTC 8272749 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 || || || | || ||||| ||||||||||| ||||| ||| ||||||| || Sbjct 8272748 ATCTCCCTGCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCA 8272696 >seq1 Length=46096743 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || || || || | ||| || || ||||| || ||||||||| Sbjct 12788212 CCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 12788271 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| || ||||| || ||| Sbjct 12788272 AGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 12788331 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| ||||| |||||||| || || | || || || || Sbjct 12788332 ATCCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 12788391 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 12788392 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 12788438 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || |||||||| Sbjct 27626574 CCGCCGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 27626515 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||||||| |||| || | || || || |||||||| || ||||| || ||| Sbjct 27626514 AGCGTGCGTTCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 27626455 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| | ||||| || ||||| | || | ||||| || || Sbjct 27626454 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACC 27626395 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 27626394 TCGAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 27626348 Score = 122 bits (134), Expect = 2e-22 Identities = 167/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | || ||||| || | ||| || || || || || |||| Sbjct 27636178 CATG-CCGCCGCGGAGACGGAGCACGAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGT 27636120 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| ||||||| ||||| || | || || || |||||||| || ||||| || Sbjct 27636119 CGGCTAGCGTGCAGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTGCG 27636060 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||| || || | || ||||| |||| || ||||| || | || |||| | Sbjct 27636059 GCGGGACGCCCTCCCTGTCGTGGATCCTCGCCTTGACGTTCTCGACCGAGTCGCAGCTGT 27636000 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||||||||| ||| ||||| |||||||||| |||||||||||||| Sbjct 27635999 CGACCTCGAGCGTGATGGTCCTCCCGTTCAGAGTCTTCACGAATATCTGCAT 27635948 >seq5 Length=31082981 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || |||||||| | || ||||| || | ||| || || ||||| || ||||||||| Sbjct 3229971 CCGCCGCGGAGGCGGAGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3229912 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || |||||||| || ||||| || ||| Sbjct 3229911 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 3229852 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || |||||||| || || | || || || || Sbjct 3229851 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACC 3229792 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 3229791 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 3229745 Score = 131 bits (144), Expect = 4e-25 Identities = 169/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| || || ||||| || | ||| || || || || || || | Sbjct 9801363 CATG-CCACCCCTGAGCCTTAGCACGAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAAT 9801421 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||||||||| || | || || || |||||||| || ||||| || Sbjct 9801422 CAGCCAGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCG 9801481 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||| || ||||| ||||| || || || | |||| || | Sbjct 9801482 GAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTGTCGATTGTATCGGAAGACT 9801541 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||| || ||||| |||||||| ||||||||||| |||||||| Sbjct 9801542 CGACCTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTGACGAAAATCTGCAT 9801593 Score = 127 bits (140), Expect = 5e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || ||||| | || || ||||||| ||| || || ||||| || |||| Sbjct 26219453 CATG-CCTCCCCGGAGGCGGAGGACAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGT 26219395 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | || || || || ||||| |||||||| || Sbjct 26219394 CAGCAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCG 26219335 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 |||||||| || || ||||||||||| || || ||||| || || | ||| || | Sbjct 26219334 GAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTATCAATGGTATCCGAGGACT 26219275 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || || ||||| || || |||||||| ||||| |||||||| Sbjct 26219274 CAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCAT 26219223 Score = 123 bits (136), Expect = 6e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | ||| || || || || |||| || || || |||||||| ||||| || Sbjct 9801138 TCCACCCCTGAGCCTGAGCACTAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGC 9801197 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||||||||| || | || || || |||||||| || ||||| || ||| Sbjct 9801198 CAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGTGG 9801257 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || ||||| || |||||||| ||||| |||||||| || || | || || || || Sbjct 9801258 AATGCCTTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATTGTGTCTGATGACTCGAC 9801317 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || || | |||||||| || |||||||| Sbjct 9801318 CTCTAATGTGATGGTCTTGCCAGTTAAGGTCTTGACAAAAATCTGCAT 9801365 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || |||||||| || ||||| || || || | || || || |||||| Sbjct 26220097 TCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAG 26220038 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| || || ||||||||||| ||||| |||||||| Sbjct 26220037 ATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACGTTG 26219978 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || || || || || || ||||| || || ||||||||| Sbjct 26219977 TCGATGGTGTCTGAGCTC---TCAACCTCCAGGGTAATAGTCTTGCCAGTGAGAGTCTTG 26219921 Query 288460 ACGAATATCTGCATT 288474 ||||| ||||||||| Sbjct 26219920 ACGAAAATCTGCATT 26219906 Score = 105 bits (116), Expect = 2e-17 Identities = 164/233 (70%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| | ||| | || || || || | ||| || || || || || |||||| Sbjct 26220364 TGACCACCCCTGAGGCGGAGCACCAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCG 26220305 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || || || || || ||||| | || || || ||||||||||| ||||| || Sbjct 26220304 GCAAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGG 26220245 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGAT 288420 ||||| ||||| || |||||||| || || ||||| || || || | ||| ||| Sbjct 26220244 GGGATGCCTTCCTTGTCCTGGATCTTAGCCTTCACATTATCGATGGTGTCGGAGCTC--- 26220188 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || ||||| || || ||||||||||| || |||||||| Sbjct 26220187 TCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 26220135 Score = 104 bits (114), Expect = 6e-17 Identities = 157/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 || ||||| || || || | ||| ||||| || || || ||||| || | || || Sbjct 9801604 AGCCTAAGCACAAGGTGTAGAGTGGACTCTTTCTGAATGTTGTAGTCTGCCAAGGTCCGA 9801663 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCT 288372 || || || | || || || |||||||| ||||||||||| |||| ||||| || Sbjct 9801664 CCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGTTG---ATCTGGGGGGATACCC 9801720 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 || || |||||||| || || |||||||| || || | || || || || || | Sbjct 9801721 TCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCTGAGGACTCAACCTCCAAA 9801780 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| ||||| || |||| ||||| || || ||||||||| Sbjct 9801781 GTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATT 9801822 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || || || | || || || | || || || || ||| Sbjct 26219641 TCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAG 26219582 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||||| || || || || |||||||| || || || || Sbjct 26219581 ATCAGACGCTGCTG---GTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTTGCCTTAACA 26219525 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | ||| || || || || || ||||| ||||| ||||||| |||||| Sbjct 26219524 TTGTCAATGGTATCAGAGGACTCCACCTCAAGGGTGATAGTCTTTCCGGTCAAGGTCTTG 26219465 Query 288460 ACGAATATCTGCAT 288473 || ||||| ||||| Sbjct 26219464 ACAAATATTTGCAT 26219451 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 6/208 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| ||| || || || || || || || Sbjct 9800920 CCACCACGGAGACGGAGCACCAGGTGCAAAGTGGATTCCTTCTGAATGTTGTAATCTGCT 9800979 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || || || | || || || || |||||||| ||||| ||| || ||| Sbjct 9800980 AAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGA---TCCGGG 9801036 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || ||||| || || ||||||||||| || || | || ||| || Sbjct 9801037 GGAATGCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTGTCAATCGTGTCTGACGACTCA 9801096 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 || || || || || || || ||||||| Sbjct 9801097 ACCTCCAGGGTAATGGTTTTGCCGGTCA 9801124 >seq2 Length=39559433 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | || || || ||||| || ||||||||| Sbjct 2778680 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCG 2778739 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||||||||| || | ||| Sbjct 2778740 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCAGGGGGG 2778799 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || ||||| || |||||||| || || ||||| || || || | || |||| || Sbjct 2778800 ATCCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGAGCTC---TCA 2778856 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || |||||||| || |||||||| Sbjct 2778857 ACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 2778906 Score = 122 bits (134), Expect = 2e-22 Identities = 170/236 (72%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 2778449 TGACCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 2778508 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 ||||| ||||| || || || | || || || |||||||| |||||||| || ||| Sbjct 2778509 GCGAGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTG---GTCT 2778565 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTC 288417 ||| || || || || |||||||| || || ||||| || || || | || |||| Sbjct 2778566 GGGGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTC 2778625 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| |||||||| |||| ||||| ||||| |||||||| Sbjct 2778626 ---TCAACCTCCAGAGTGATGGTCTTCCCAGTCAAGGTCTTAACGAAGATCTGCAT 2778678 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || ||||||| ||| ||| || ||||| || ||||| || Sbjct 31555919 CCACCGCGGAGGCGCAGGACAAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCC 31555978 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || |||| || || || || ||||| || | |||||| |||| Sbjct 31555979 AAGGTACGCCCATCCTCTAGCTGCTTCCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGG 31556038 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| || || || || || || || | ||| |||| || Sbjct 31556039 ATGCCCTCCTTGTCCTGGATCTTGGCCTTAACATTGTCGATGGTATCAGAGCTC---TCG 31556095 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || || || |||||||| || |||||||| Sbjct 31556096 ACTTCAAGTGTGATAGTCTTTCCAGTTAGGGTCTTGACAAAGATCTGCAT 31556145 Score = 114 bits (126), Expect = 3e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || ||||| || ||||| ||| Sbjct 2778908 CCACCACGAAGGCGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCG 2778967 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || || || | || || || |||||||| |||||||| || || ||| Sbjct 2778968 AGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGG---TCCGGG 2779024 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || || || ||||| || || | ||| || || Sbjct 2779025 GGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTATCAGAAGACTCG 2779084 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || ||||||||||| ||||| |||||||| Sbjct 2779085 ACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAAGATCTGCAT 2779134 Score = 104 bits (114), Expect = 6e-17 Identities = 140/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| || | |||||||| || |||| || ||||| || ||| Sbjct 31556411 TCCTTCTGGATGTTGTAGTCAGCCAATGTGCGTCCATCCTCTAGCTGCTTTCCAGCAAAG 31556470 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| ||| | |||||| || || || |||||||| || || || || || Sbjct 31556471 ATAAGCCTCTGCTGATCAGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTG 31556530 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| |||| || || || | ||||||||||| || || || ||||| Sbjct 31556531 TCAATTGTATCAGAGCTC---TCAACCTCAACTGTGATCGTCTTTCCTGTAAGGGTCTTC 31556587 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 31556588 ACAAAGATCTGCAT 31556601 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || || ||||| | ||||| || || || | ||| || || || ||| Sbjct 31556183 TCCTTCTGAATGTTGTAATCGGCCAATGTGCGCCCATCCTCCAGTTGCTTCCCAGCAAAG 31556242 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | |||||| || || || ||||||||||| || || || || Sbjct 31556243 ATGAGCCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGGATTTTTGCCTTGACATTG 31556302 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || |||| || ||||| || || || ||||| || ||||||||||| Sbjct 31556303 TCGATGGTGTCAGAGCTC---TCCACTTCCAGAGTTATGGTCTTGCCAGTCAGAGTCTTC 31556359 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 31556360 ACAAAGATCTGCAT 31556373 Score = 93.3 bits (102), Expect = 1e-13 Identities = 162/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || || || || | ||| || || ||||| || |||| Sbjct 2779588 CATG-CCACCGCGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGT 2779646 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCG-AAGATCAGACGCTGTTGAGAA 288360 | || || || | ||||| || | || || || ||| ||||| |||||||| || Sbjct 2779647 CAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCGAAAGATGAGACGCTGCTGGTCC 2779706 Query 288361 TCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||||| || || ||||| ||||| || || || || || || || | || || Sbjct 2779707 GGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATTGTCGATGGTGTCAGAGGAC 2779766 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| ||||| || |||| ||||| || || |||||||| Sbjct 2779767 TCCACCTCAAGGGTGATAGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCAT 2779819 >seq4 Length=33711903 Score = 116 bits (128), Expect = 9e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| |||||||| || || ||||| ||||| || | || || || |||||| Sbjct 30264701 TCCTTCTGGATGTTATAGTCAGCAAGGGTGCGACCGTCCTCAAGCTGCTTGCCAGCGAAG 30264642 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || |||||| || || || ||||||||||| || || ||||| Sbjct 30264641 ATGAGCCGCTGCTGG---TCTGGGGGGATGCCCTCCTTATCCTGGATCTTGGCCTTCACA 30264585 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | || ||| || || || || || || ||||| ||||| || ||||| Sbjct 30264584 TTATCGATCGTGTCAGACGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTC 30264525 Query 288460 ACGAATATCTGCAT 288473 |||||||| ||||| Sbjct 30264524 ACGAATATTTGCAT 30264511 Score = 95.1 bits (104), Expect = 3e-14 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || || || || | ||||| || || | ||| || || ||||| ||||| | Sbjct 30264513 CATG-CCTCCACGAAGGCGGAGTACAAGGTGCAAGGTGGACTCCTTCTGGATGTTATAAT 30264455 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || || || || || || | || || || |||||||| || ||||| || Sbjct 30264454 CCGCAAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCCG 30264395 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || ||||| || || || ||||| || || || | |||| || | Sbjct 30264394 GAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATCGTATCGGAGGACT 30264335 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || | ||||| ||||| || || || ||||| || ||||||||||| Sbjct 30264334 CAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAACAAATATCTGCAT 30264283 >seq9 Length=26294017 Score = 86.0 bits (94), Expect = 1e-11 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || || || ||||| || || | ||||| || || Sbjct 19864958 ATACCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGCTGCTCTCCACC 19864899 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||||| || ||| ||||| ||||| |||||||| Sbjct 19864898 TCCAGCGTGATCGTCTTCCTGGACAGCGTCTTCACGAAGATCTGCAT 19864852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654218628136