Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 145 8e-30 seq5 107 2e-18 seq2 107 2e-18 seq1 102 8e-17 seq4 82.4 8e-11 >seq6 Length=34615992 Score = 145 bits (160), Expect = 8e-30 Identities = 349/514 (68%), Gaps = 18/514 (4%) Strand=Plus/Plus Query 52328 GCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGAC-ACCGCCA 52386 |||||||| ||||| |||| | ||||| ||| ||||||||| ||| | | ||| Sbjct 933669 GCCGTGCGC-CGCAA---GGCTGACTGGGCCATGCGGTGGATCGACGGCGGCGAGCGCTT 933724 Query 52387 CGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCT 52446 ||| ||||||| | |||||||||||| |||||||| | || || || ||| | Sbjct 933725 CGC----CGAGCGCCTCGTGGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCAT 933780 Query 52447 TTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACG 52506 | ||||||||| | | || | | || | ||||| ||||| || ||| ||||| Sbjct 933781 TCTGCGCCATCTTCTGGCTCAAGAAGCGGGGACTCATGCCGGGCCTCACCTTCTCCAACG 933840 Query 52507 AGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGC 52566 || | || || |||||||| || || ||| ||||| || |||||| |||| ||| | Sbjct 933841 AGCTCATCTCCCGCGACGAGGGTCTCCACTGCGACTTCGCTTGCCTCCTCTAC--GAC-C 933897 Query 52567 GCGTGACCGAAAAATTGGATTCGGACACG-ATCCTGAGCATGTTCAAGGAGGCGGTGGCT 52625 | | || || | ||| || | || ||| ||| || || || || | Sbjct 933898 TCCTCCGCGGCAAGCTCGATGAGG-CGCGCGTCCAAGACATCGTCGCCGACGCCGTCGAC 933956 Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 ||||| | |||||| | | ||||| || |||| ||| | || ||||||| || Sbjct 933957 ATCGAGAGGGAGTTCGTCTGCGATGCGCTCCCCGTCGCGCTCGTCGGGATGAACGGCGAG 934016 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA 52745 |||| || ||||||||||||| || || || || ||| | || |||| || || | Sbjct 934017 CTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTC-GGATGCAA 934075 Query 52746 -AAGTACTTCAACGCTCG-CAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803 ||| | ||| | ||| ||| ||||| || | ||| | ||| || || |||||| Sbjct 934076 GAAGATGTACAATG-TCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCA 934134 Query 52804 AGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||| ||||||||||| |||||||| || Sbjct 934135 AGACCAACTTCTTCGAGAAGCGTGTCGGCGACTA 934168 Score = 140 bits (154), Expect = 3e-28 Identities = 337/498 (68%), Gaps = 14/498 (3%) Strand=Plus/Minus Query 52344 AAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGAC-ACCGCCACGCTGGCCGAGCGCAT 52402 |||||| | ||||| ||| |||||||| ||| | | ||| ||| ||||||| | Sbjct 8273186 AAGGCTGAATGGGCCATGCGCTGGATCGACGGCGGCGAGCGCTTCGC----CGAGCGCCT 8273131 Query 52403 GGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTA 52462 || |||||||| |||||||| | || || || || ||| ||||||||||| Sbjct 8273130 CGTCGCCTTCGCTTGCGTCGAGGGGATCTTCTTCTCGGGTTCCTTCTGCGCCATCTTTTG 8273071 Query 52463 CATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGA 52522 | || | | ||| | ||||| ||||| || ||| ||||||| | || || ||||| Sbjct 8273070 GCTCAAGAAGCGGGGCCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGA 8273011 Query 52523 CGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATT 52582 ||| || |||||| ||||| || |||||| ||| | || | | | || || | Sbjct 8273010 CGAGGGCCTGCACTGCGACTTCGCCTGCCTC--CTATACGAA-CTCCTCCGCGGCAAGCT 8272954 Query 52583 GGATTCGGACACGATCCT-GAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTT 52641 || || | ||| ||| || || || || || | ||||| | |||||| Sbjct 8272953 CGACGAGGCCCGTGTCCGCGAG-ATCGTCGCCGACGCCGTCGACATCGAGAGGGAGTTCG 8272895 Query 52642 TTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACA 52701 | | |||||| || |||| ||| | |||||||||| | |||| || |||||| Sbjct 8272894 TCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATGAGCCAGTACA 8272835 Query 52702 TCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGTACTTCAACGCT 52760 ||||||| || || || || || | || |||||| | || | ||| | ||||| | Sbjct 8272834 TCGAGTTCGTCGCCGACCGCCTCCTCATGGCGCTCGG-CTGCAAGAAGATGTACAACG-T 8272777 Query 52761 CGCAATCCGTTT-GAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819 ||| | || ||| || | ||| | ||| || || |||||||||||||||| ||||| Sbjct 8272776 CGCCAACCCTTTCGACTGGATGGAGCTCATCTCCCTGCAGGGCAAGACCAACTTCTTCGA 8272717 Query 52820 GAAGCGAGTCGGCGAGTA 52837 |||||| |||||||| || Sbjct 8272716 GAAGCGCGTCGGCGACTA 8272699 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || ||||| || || || || | Sbjct 32009435 GACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCG 32009376 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| ||||| || || || || || ||||| ||| || || | | Sbjct 32009375 AAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 32009316 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||| ||||||| || | ||||| || || || || || Sbjct 32009315 TTG-TCAATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTTTTGCCGGTGAGGGTCTT 32009257 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 32009256 CACAAAGATCTGCAT 32009242 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || |||||| || || || || | Sbjct 32010119 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTCTAGCTGCTTGCCAGCG 32010060 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 32010059 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACG 32010000 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||||| ||| | || || |||||||| || || Sbjct 32009999 TTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATGGTCTTGCCAGTCAGGGTCTTG 32009940 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 32009939 ACGAAGATCTGCAT 32009926 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || |||||| || || || || | Sbjct 32009663 GACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCG 32009604 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || ||||| ||| || || | Sbjct 32009603 AAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACG 32009544 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | |||||| ||||| | || | || || ||||||| || || Sbjct 32009543 TTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTC 32009484 Query 138601 ACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 32009483 ACGAAGATCTGCATGCCT 32009466 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| || || || | |||||| || || || |||| | Sbjct 31537792 GACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTACCGTCCTCAAGCTGCTTGCCGGCA 31537851 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| || || ||||| || || || ||||| ||| || || | | Sbjct 31537852 AAGATGAGACGCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTCACA 31537911 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||| | || | || || || |||| || || Sbjct 31537912 TTG-TCGATCGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCTGTCAAGGTCTT 31537970 Query 138600 TACAAAAATCTGCATGGCT 138618 ||||| ||||||||| || Sbjct 31537971 CACAAAGATCTGCATGCCT 31537989 >seq5 Length=31082981 Score = 107 bits (118), Expect = 2e-18 Identities = 146/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||| || || ||| || ||||||||| || || |||| Sbjct 9801400 GACTCCTTCTGAATGTTGTAATCAGCCAGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCG 9801459 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || ||||| ||||||||||| || || || ||||| ||| | || | || Sbjct 9801460 AAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC-CTGAATCTTCGCCTTCAC 9801518 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | || |||| ||||| ||||| | ||| | || || || ||||| || | Sbjct 9801519 ATTG-TCGATTGTATCGGAAGACTCGACCTCAAGCGTAATGGTCTTGCCGGTCAGGGTCT 9801577 Query 138599 TTACAAAAATCTGCATGGCT 138618 | || |||||||||||| || Sbjct 9801578 TGACGAAAATCTGCATGCCT 9801597 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || |||| Sbjct 3229938 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 3229879 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || ||||| ||||| ||| || || | Sbjct 3229878 AAGATGAGGCGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACG 3229819 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | || || || ||||| || || Sbjct 3229818 TTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTC 3229759 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 3229758 ACGAAGATCTGCAT 3229745 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | ||| || || ||||| || || || | | Sbjct 26219416 GACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCA 26219357 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||||||||| || || || ||||| |||||| || | Sbjct 26219356 AAGATGAGACGCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACG 26219297 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| || | ||||| ||||| | || | || || ||||| ||||| || Sbjct 26219296 TTATCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTC 26219237 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 26219236 ACGAAGATCTGCAT 26219223 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 138406 ACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCG 138465 |||| || | | |||||||||| || || |||||||| || || || ||||||| Sbjct 9801157 ACTAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGCCAGGGTGCGTCCGTCCTCG 9801216 Query 138466 AGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTG 138525 || || || |||| |||| || ||||| ||||| || || || ||||| ||||| | Sbjct 9801217 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGG 9801276 Query 138526 ATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTA 138585 || || || | | || | ||||| | ||||| ||||| | || | || || Sbjct 9801277 ATCTTCGCCTTCACGTTGTCGATTGTGTCTGATGACTCGACCTCTAATGTGATGGTCTTG 9801336 Query 138586 CCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || || ||||||||||||||| Sbjct 9801337 CCAGTTAAGGTCTTGACAAAAATCTGCATG 9801366 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | ||||| || || || || || || | Sbjct 26220328 GACTCCTTCTGAATGTTGTAGTCGGCAAGGGTACGGCCATCTTCCAGCTGCTTGCCAGCG 26220269 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 26220268 AAGATCAGGCGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTGGATCTTAGCCTTCACA 26220209 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||| ||||| | || | || || ||||| ||||| || Sbjct 26220208 TTATCGATGGTGTCGGAGCTCTCAACCTCCAGAGTAATGGTCTTGCCAGTGAGAGTCTTG 26220149 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 26220148 ACAAAGATCTGCAT 26220135 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || ||||||||||| || | || || ||||||||||| || || | | Sbjct 9801856 GACTCTTTCTGAATGTTGTAATCTGCAAGGGTGCGGCCATCCTCGAGTTGCTTGCCCGCA 9801915 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| || ||||||||||| || || ||||| || ||||| ||| | || | || | Sbjct 9801916 AAGATGAGGCGCTGTTGGTCAGGTGGAATACCCTCCTTGTC-CTGAATCTTGGCCTTGAC 9801974 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | || || | ||||| ||||||| || | || || ||||| || || | Sbjct 9801975 GTTG-TCGATCGTATCTGAGGACTCAACCTCGAGGGTTATGGTCTTGCCAGTGAGTGTCT 9802033 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 9802034 TCACAAAGATCTGCAT 9802049 >seq2 Length=39559433 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | | | |||||||| ||||||||||| ||| | Sbjct 31556147 CCTCCACGAAGACGGAGGACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCC 31556206 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| ||||| ||||| || || | | |||| || | ||| ||||| || || Sbjct 31556207 AATGTGCGCCCATCCTCCAGTTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGTGGG 31556266 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||||||| || | |||| || | |||||| | |||||| Sbjct 31556267 ATGCCCTCCTTGTCCTGGATTTTTGCCTTGACATTG-TCGATGGTGTCAGAGCTCTCCAC 31556325 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||||||| || ||||| |||||||| Sbjct 31556326 TTCCAGAGTTATGGTCTTGCCAGTCAGAGTCTTCACAAAGATCTGCAT 31556373 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| | || | || | ||||| || || || |||| Sbjct 2779169 GACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCA-TCCTCAAGCTGCTTGCCGGC 2779227 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 | |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 2779228 AAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC 2779287 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | || |||||||||| || | || || || ||||| || || Sbjct 2779288 GTTGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTT 2779347 Query 138600 TACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 2779348 GACAAAGATCTGCATG 2779363 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || | ||| || | ||| | || | | | || |||||||||||||| ||||| Sbjct 31556603 CCACCCCTCAAGCGAAGAACAAGGTGGAGGGTGGATTCCTTTTGAATGTTATAGTCAGCG 31556662 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| ||||| || || | | |||| || | ||||||||| || || Sbjct 31556663 AGTGTCCGGCCATCCTCTAGTTGCTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGGGGG 31556722 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || ||| | |||| || | |||||||| ||| || Sbjct 31556723 ATACCCTCCTTGTCCTGGATCTTGGCTTTAACATTG-TCAATGGTGTCGGAACTCTCTAC 31556781 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||| ||| || ||||| |||||||| Sbjct 31556782 ATCAAGAGTGATAGTCTTGCCAGTCAAAGTCTTGACAAAGATCTGCAT 31556829 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| | || | || | ||||| || || || || | Sbjct 2778941 GACTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCA-TCCTCCAGCTGCTTGCCAGC 2778999 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 2779000 GAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTAGCCTTGAC 2779059 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||| || | ||||| ||||||| || | || || ||||||||||| || Sbjct 2779060 GTTGTCAATGGTATCAGAAGACTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTT 2779119 Query 138600 TACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 2779120 CACGAAGATCTGCATGCCT 2779138 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA- 138479 |||||||| || ||||||||||| | || | |||||| || || || |||| Sbjct 2779625 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCCAGCTGCTTGCCGGCG 2779684 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 | |||| |||||||| |||||||| || || || || || || ||| || || | Sbjct 2779685 AAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGAC 2779744 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||||| | | |||||| | ||||||||||| | || | || || ||||||| || | Sbjct 2779745 ATTGT-CGATGGTGTCAGAGGACTCCACCTCAAGGGTGATAGTCTTGCCAGTCAATGTCT 2779803 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 2779804 TCACAAAGATCTGCAT 2779819 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || |||| Sbjct 2778713 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 2778772 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| ||||| || || || ||||| ||||| ||| || || | | Sbjct 2778773 AAGATCAGACGCTGCTGGTCAGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACA 2778832 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||| ||||| | || | || || || || || || || Sbjct 2778833 TTG-TCGATGGTGTCAGAGCTCTCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTT 2778891 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 2778892 GACAAAGATCTGCAT 2778906 >seq1 Length=46096743 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || ||| |||||| || || || |||| Sbjct 12788245 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCG 12788304 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 12788305 AAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTCGCCTTCACG 12788364 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | || || || ||||| || || Sbjct 12788365 TTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTC 12788424 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 12788425 ACGAAGATCTGCAT 12788438 >seq4 Length=33711903 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||| || || | ||||||| ||||| || || || || | Sbjct 30264476 GACTCCTTCTGGATGTTATAATCCGCAAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCG 30264417 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 |||| || ||||| ||||||||||| || || || ||||| ||| | || | || Sbjct 30264416 AAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC-CTGAATCTTAGCCTTCAC 30264358 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| || | || |||| ||||| ||||| | || | || || ||||| || || | Sbjct 30264357 ATTG-TCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCT 30264299 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 30264298 TAACAAATATCTGCAT 30264283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262325560640