Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq7 251 2e-62 >seq7 Length=31244610 Score = 251 bits (278), Expect = 2e-62 Identities = 350/488 (72%), Gaps = 2/488 (0%) Strand=Plus/Plus Query 26298 TTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTG 26357 ||||| | |||||||| ||||||||||| || || ||||| ||||| || ||| |||| Sbjct 14634319 TTATGATTGTATTCCAGGCAGAACATAACATCCTTATGCATCCATTTCACATGTTAGGTG 14634378 Query 26358 TTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCT 26417 | ||||| || ||||| || | || ||| ||||||||| || ||||| || || Sbjct 14634379 TAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTA 14634438 Query 26418 CACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAG 26477 | || ||||| || || | | || ||| | || || | ||||| |||| Sbjct 14634439 GTTTGATCAGGGAAACCACTGAAAACGAATCCGCTAATGAGGGTTACAGATTTGGTCAAG 14634498 Query 26478 ATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGT 26537 | |||||||| ||||||||||| || || || || || ||||| ||||||| || || | Sbjct 14634499 AGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAAT 14634558 Query 26538 ATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTG 26597 |||| |||||||| ||| |||||| | || ||||| | ||| ||||||| || | | Sbjct 14634559 ATGCTAGTTTTAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGCAG 14634618 Query 26598 GCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACT 26657 | || ||| | || || | ||||| | || ||||| || |||||||| || || || | Sbjct 14634619 GGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAACGGATTCAATT 14634678 Query 26658 TTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCTACATGGGCTGATGTATTA 26716 | ||||| || ||||| ||| | || | | || || ||| ||||||||| | | Sbjct 14634679 TCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTA-ATACTTGGGCTGATATCATC 14634737 Query 26717 AACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTT 26776 ||||| ||||| || || | ||||| |||||||| ||||||||||| ||||| || || Sbjct 14634738 AACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTA 14634797 Query 26777 GACTTAGC 26784 ||| |||| Sbjct 14634798 GACCTAGC 14634805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146726379091488