Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 230 3e-54 seq1 140 4e-27 seq5 129 7e-24 seq9 109 7e-18 seq11 104 3e-16 seq8 104 3e-16 seq7 91.5 2e-12 seq3 89.7 6e-12 >seq6 Length=34615992 Score = 230 bits (254), Expect = 3e-54 Identities = 245/318 (77%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||| ||||| |||||| |||||| |||||||||||||||| || ||||| Sbjct 8272689 CGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGAT 8272748 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||||||| ||| ||||| |||| | ||||| ||| | ||| ||||||| | Sbjct 8272749 GAGCTCCATCCAGTCGAAAGGGTT-GGCGACGTTGTACATCTTCTTGCAGCCGAGCGCCA 8272807 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 ||| |||||||||||||| |||||||||||||||| ||||||| || |||||||||||| Sbjct 8272808 TGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCATGCCGA 8272867 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| || || |||| |||| || ||||| ||||||| |||||||| ||| ||| Sbjct 8272868 CGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGTCGGCGA 8272927 Query 868929 TGATCTGCCTGGGCACGTCGGCC---GAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGC 868985 ||||| | || |||| |||| | ||||| | ||| | ||| || |||| Sbjct 8272928 CGATCT-CGCGGACACG--GGCCTCGTCGAGCTTGCCGCGGAGGAGTTCGTATAGGAGGC 8272984 Query 868986 AGGCAAAGTCGCAGTGCA 869003 |||| ||||||||||||| Sbjct 8272985 AGGCGAAGTCGCAGTGCA 8273002 Score = 223 bits (246), Expect = 4e-52 Identities = 255/335 (76%), Gaps = 7/335 (2%) Strand=Plus/Minus Query 868678 GGACGAGACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCC 868737 |||| |||| |||||| ||| ||||| || ||| |||||| |||||||||||||| Sbjct 934190 GGACATGACGGACGCCTTCTGGTAGTCGCCGACACGCTTCTCGAAGAAGTTGGTCTTGCC 934131 Query 868738 CTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGC 868796 || || ||||| | ||||||||| ||||||||||| || | ||||| ||| | || Sbjct 934130 CTGCAGGGAGATGAGCTCCATCCAGTCGAACGGGTTGG-CGACATTGTACATCTTCTTGC 934072 Query 868797 ATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGG 868856 ||||||||| | |||||| ||||||||||| |||||||||||||||| |||||| || Sbjct 934071 ATCCGAGCGCCATGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGC 934012 Query 868857 CGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGA 868916 ||||||| |||| |||||| || || |||| |||| || ||||| ||||||| |||| Sbjct 934011 CGTTCATCCCGACGAGCGCGACGGGGAGCGCATCGCAGACGAACTCCCTCTCGATGTCGA 933952 Query 868917 CGGCCTCGACGATGATCTGCCTGGGCACGTCGGCCGA--GGGCTTGTTGACGAGCATCGT 868974 |||| ||| ||| ||| | | ||| | || || | | | ||||| | ||| | Sbjct 933951 CGGCGTCGGCGACGATGT-CTTGGACGCG-CGCCTCATCGAGCTTGCCGCGGAGGAGGTC 933894 Query 868975 GTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 |||||| ||||| || ||||||||||| | ||||| Sbjct 933893 GTAGAGGAGGCAAGCGAAGTCGCAGTGGAGACCCT 933859 Score = 210 bits (232), Expect = 3e-48 Identities = 212/275 (77%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||| ||||| ||||| | |||| || || || Sbjct 8273284 GAGTGGATGTTCTCGATGGCGATCTGGAATCCGTAGAAGGCGCGTGCCTCGGCGACCTGC 8273343 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| | ||| ||||||||| ||||||||||||| ||| ||||| Sbjct 8273344 ACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCAGCGAAG 8273403 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809 || || || ||||| ||| ||||||||||||||| | |||| | |||||||| Sbjct 8273404 AAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGAGAGCGCGGCGTCCCAGTGG 8273463 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||||||| |||||| |||||||| || ||||||| ||| ||| | ||||| ||| Sbjct 8273464 CGCGCGTCGGCGGAGAGGTCGACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCTTG 8273523 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 || | |||||| | ||| |||| ||||| ||||| Sbjct 8273524 TAGAACTCCCAGATCTGCGGGTAACGGATGGGGAA 8273558 Score = 192 bits (212), Expect = 7e-43 Identities = 210/277 (76%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||| || || || || | |||| || || | Sbjct 933585 CCGAGTGGATGTTCTCGATGGCGATCTGGAATCCATAGAACGCGCGTGCCTCGGCGACCT 933526 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||||||| | ||| ||||||||| ||| ||||| ||| ||| |||| Sbjct 933525 GCACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACAATGCCATCGGAGGCCGCGA 933466 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC--GTCGCTGAGCGAC-ACCCAGT 869807 | || || || ||||| || |||||||||||||| || | | ||| | |||||| Sbjct 933465 AGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGGTGACAGCGCGGCGTCCCAGT 933406 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 || | |||| || ||||||||||||||| || ||||||| ||| ||| | ||||| | Sbjct 933405 GGCGCGCGTCGCCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACTGCCTTCT 933346 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||| | |||||| | ||| |||| ||||| ||||| Sbjct 933345 TGTAGAACTCCCAGATCTGCGGGTACCGGATCGGGAA 933309 Score = 188 bits (208), Expect = 9e-42 Identities = 213/286 (74%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | |||||| |||| |||||| |||||||| || ||||| Sbjct 933863 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCCCGCTT 933804 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| || Sbjct 933803 CTTGAGCCAGAAGATGGCGCAGAATGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAA 933744 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | ||| |||||||| ||| ||| ||| || ||||||| ||| ||||| Sbjct 933743 GGCCACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCACCGCATGGCCCA 933690 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||| ||||| | ||| | || || |||||||||||||| |||||| | ||||| || Sbjct 933689 GTCAGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGATCCTTCTC 933630 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | ||| || ||||| |||| ||| ||||| || ||||| Sbjct 933629 GACGTCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTCC 933584 Score = 185 bits (204), Expect = 1e-40 Identities = 211/284 (74%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| ||||||||||| |||||| Sbjct 8273005 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCCCGCTTC 8273064 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 ||||||||||||||||||||||| |||||||| ||||| ||||||||| || ||| Sbjct 8273065 TTGAGCCAAAAGATGGCGCAGAAGGAACCCGAGAAGAAGATCCCCTCGACGCAAGCGAAG 8273124 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| |||||||| ||| ||| ||| || |||||| ||| ||||| Sbjct 8273125 GCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAT 8273178 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 || ||||| | || | || || |||||||||||||| |||||| ||||||| ||| Sbjct 8273179 TCAGCCTTGCGGCGGACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 8273238 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||| || ||||| |||| ||| ||||| || |||| Sbjct 8273239 GCGTCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTC 8273282 >seq1 Length=46096743 Score = 140 bits (154), Expect = 4e-27 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||||||||||||||||||| | | || Sbjct 2343956 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGA 2344015 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 2344016 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2344075 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| || |||||||||| |||||| | |||| |||||| || | |||||||| Sbjct 2344076 TATCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATACCGATGTCGGGGT 2344135 Query 1254523 GCACCTGCTTGAGCACCTTGTAGAT 1254547 | |||||||||||||||||| |||| Sbjct 2344136 GGACCTGCTTGAGCACCTTGAAGAT 2344160 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||||||||||||||||||| | | || Sbjct 2328972 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCGCGGGAGGTGA 2329031 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 2329032 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 2329091 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| || |||||||||| |||||| | |||| ||||||||| | |||||| | Sbjct 2329092 TATCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCGGGAT 2329151 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| | ||| Sbjct 2329152 GGACCTGCTTGAGCACCTTGAATATG 2329177 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2320637 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2320696 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2320697 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2320756 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2320757 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2320816 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2320817 GGACCTGCTTGAGCACCTTGAAGATG 2320842 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | || Sbjct 2299098 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAAGTGA 2299157 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2299158 TGGTAGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2299217 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||| | Sbjct 2299218 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGAT 2299277 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2299278 GGACCTGCTTGAGCACCTTGAAGATG 2299303 Score = 113 bits (124), Expect = 6e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| | | || |||||||| | ||||||||||||||| | | || Sbjct 38571296 GCTTGGCGAGCTCACCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGAGAGGTGA 38571355 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || || ||| ||||||| | | | || | | Sbjct 38571356 TGGTCGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCCTGGGCAAGCTTTTCAAATA 38571415 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||| | |||||| | |||| |||||| || | ||| |||| Sbjct 38571416 TGTCGTTGATGAACGAGTTCATAATCGACATGGCCTTGGAGGAGATCCCGATGTCAGGGT 38571475 Query 1254523 GCACCTGCTTGAGCACCTTGTAGAT 1254547 ||||||||||||| ||||| |||| Sbjct 38571476 GCACCTGCTTGAGGACCTTAAAGAT 38571500 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||| |||||||| | | || Sbjct 2174906 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGAATCTCGCGGGAGGTGA 2174847 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || || | | | ||| | ||| |||| | Sbjct 2174846 TGGTAGGCTTCTTGTTGTAGCGGGCGAGCTTGGCAGACTCTCCGGCGAGCTTCTCGAAGA 2174787 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | ||| |||| Sbjct 2174786 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCTGGGT 2174727 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2174726 GGACCTGCTTGAGCACCTTGAAGATG 2174701 Score = 86.0 bits (94), Expect = 8e-11 Identities = 94/123 (76%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486 |||||| ||| | || || | ||||| |||| |||| || || |||||||||||||| Sbjct 30733945 GTCGGCCGCC--GCGC-TCACGTACCTCCACGCCATCGAGCCACCTATCGTGCACCGCGA 30733889 Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546 | |||||| | |||| | || ||||| ||| | |||||||||| ||||||||||| Sbjct 30733888 CGTCAAGACCACCAACATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCCGACTTTGG 30733829 Query 1349547 CCT 1349549 ||| Sbjct 30733828 CCT 30733826 >seq5 Length=31082981 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 29762403 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCACGGGAGGTGA 29762344 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| || || | || || | ||||||||| | ||| |||| | Sbjct 29762343 TGGTGGGCTTCTTATTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 29762284 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 29762283 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 29762224 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||||||||||||| ||||| Sbjct 29762223 GGACTTGCTTGAGCACCTTGAAGATG 29762198 >seq9 Length=26294017 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||| |||||||| ||||| ||||| ||| || ||||||| || Sbjct 24623675 GCTGCGAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACTGTGGCTGAC 24623616 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||| | ||| Sbjct 24623615 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAGGAACG 24623561 >seq11 Length=28494620 Score = 104 bits (114), Expect = 3e-16 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| ||||||||| |||||||| || | || ||| ||| || |||| || || Sbjct 16216024 GCCGCGAACTACCTCAACATCAAGGGGTTGTTGGACCTTACTTGCCAGACTGTTGCTGAC 16216083 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 16216084 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 16216138 Score = 100 bits (110), Expect = 3e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||| ||| |||||||| |||| ||||| ||| || |||| || || Sbjct 5277701 GCTGCAAACTATCTCAACATCAAGGGATTGCTGGATCTGACTTGCCAGACTGTTGCTGAC 5277760 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||| | || ||||| |||||||||||||| ||||||||| ||| Sbjct 5277761 ATGATCAAGGGCAAGACTCCAGAGGAAATCCGCAAGACCTTCAACATCAAGAACG 5277815 >seq8 Length=29853973 Score = 104 bits (114), Expect = 3e-16 Identities = 150/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || || || |||| |||||||||||| | | | || Sbjct 25176162 GCTTGGCGAGCTCGCCGGGGAGGACGAGTCGGACGGAGGTCTGGATCTCCCTGGAGGTGA 25176103 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCG-ATGCGG-TCGAT 1254460 | ||| |||||| | || || | |||||||| ||| | || |||| Sbjct 25176102 TGGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGCCTCGC--CCGCAAGCTTCTCGAA 25176045 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 |||||||||| ||||||||||||| |||||| | |||| ||| || || | ||| || Sbjct 25176044 GATGTCGTTGATGAACGAGTTCATGATCGACATAGCCTTGGAGGAAATCCCGATGTCCGG 25175985 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||| |||||| ||||| Sbjct 25175984 GTGCACCTGCTTGAGGACCTTGAAGATG 25175957 >seq7 Length=31244610 Score = 91.5 bits (100), Expect = 2e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 ||||||| || | ||| ||||||||||||||||||||| | || ||| | || Sbjct 27602443 CCCTCTTCGATGTCATCGCAGCCGCCAACTACCTCGACATCGATGACCTCCTCAACCTCA 27602502 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| || ||| ||| ||||||||||||| | |||||||||||||||||| | Sbjct 27602503 CCTGCAAGAGGGTCGCCGACACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGT 27602562 Query 1592286 TTAACATC 1592293 | |||||| Sbjct 27602563 TCAACATC 27602570 Score = 91.5 bits (100), Expect = 2e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 ||||||| || | ||| ||||||||||||||||||||| | || ||| | || Sbjct 27875678 CCCTCTTCGATGTCATCGCAGCCGCCAACTACCTCGACATCGATGACCTCCTCAACCTCA 27875737 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 |||||| || ||| ||| ||||||||||||| | |||||||||||||||||| | Sbjct 27875738 CCTGCAAGAGGGTCGCCGACACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGT 27875797 Query 1592286 TTAACATC 1592293 | |||||| Sbjct 27875798 TCAACATC 27875805 >seq3 Length=38925377 Score = 89.7 bits (98), Expect = 6e-12 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Plus Query 1572461 TCGATGAGCAACTGGGCGATGCG--CGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGT 1572518 ||||||| || ||| ||||| || |||| || | || || ||||| ||||| || Sbjct 28684854 TCGATGATCATCTGCGCGATCCGGTCGCCAGGC--TTCACGGCGAAGTCGGTGTCGGAGT 28684911 Query 1572519 GGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGA 1572578 |||||||||| | ||| |||||| ||| || |||||||| ||||| || || ||||| | Sbjct 28684912 GGTTGAAGAGGATGACCCCCACCGGGCCACGGTAGTCGGCGTCGATCACCCCGGCGCCCA 28684971 Query 1572579 CGTCGAT 1572585 ||||||| Sbjct 28684972 CGTCGAT 28684978 Score = 87.8 bits (96), Expect = 2e-11 Identities = 96/125 (77%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||| |||||||||||||| | |||||||| Sbjct 2402341 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 2402282 Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725 ||| | || || |||||| | | || | ||||||||||| | | ||| | |||| | Sbjct 2402281 ATCGCCGATTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 2402223 Query 1347726 CACCG 1347730 | ||| Sbjct 2402222 CGCCG 2402218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138215223804