Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 7e-11 >seq5 Length=31082981 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||| || || || || || |||||||| || |||| Sbjct 9801400 GACTCCTTCTGAATGTTGTAATCAGCCAGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCG 9801459 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||| || || ||||| ||||| || || || ||| || |||| Sbjct 9801460 AAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACA 9801519 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||||| | ||| || || | ||| | || || || ||||| || || Sbjct 9801520 TTGTCGATTGTATCGGAAGACTCGACCTCAAGCGTAATGGTCTTGCCGGTCAGGGTCTTG 9801579 Query 132110 ATGAAAATCTGCATGACT 132127 | ||||||||||||| || Sbjct 9801580 ACGAAAATCTGCATGCCT 9801597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476611128508320