Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 7e-11 >seq6 Length=34615992 Score = 82.4 bits (90), Expect = 7e-11 Identities = 108/146 (74%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327 || ||||||||||| || || ||||||||||| || |||| || || ||||| || ||| Sbjct 30154729 GACAAAGAGGGTATCCCCCCAGATCAGCAAAGGCTGATTTTCGCAGGGAAACAGCTGGAA 30154788 Query 25328 GATGATAGAAATGTCAGC-GATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTT 25386 |||| | | | ||| |||||||| ||||| ||||| ||||| | ||||| || | Sbjct 30154789 GATG-GACGTACATTAGCTGATTACAACATTCAGAAAGAGTCCACGCTCCATTTGGTCCT 30154847 Query 25387 AAGATTGAGAGGAGGAA-AATGATCA 25411 || | || || |||| ||||||| Sbjct 30154848 GAGGCTCAGGGGTGGAACCATGATCA 30154873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094333235840