Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2 116 2e-21 seq6 109 3e-19 seq5 96.9 2e-15 seq4 89.7 3e-13 seq1 87.8 1e-12 >seq2 Length=39559433 Score = 116 bits (128), Expect = 2e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | |||||||| || || |||||| |||||||| ||||| | Sbjct 31556147 CCTCCACGAAGACGGAGGACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGCC 31556206 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | ||| ||| | || || ||||| || || ||||| || | | ||| ||||| || || Sbjct 31556207 AATGTGCGCCCATCCTCCAGTTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCAGGTGGG 31556266 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| ||||| || || | || ||||| ||||||||| Sbjct 31556267 ATGCCCTCCTTGTCCTGGAT-TTTTGCCTTGACATTGTCGATGGTGTCAGAGCTCTCCAC 31556325 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| ||||| || || || || | || |||||||| |||||||| Sbjct 31556326 TTCCAGAGTTATGGTCTTGCCAGTCAGAGTCTTCACAAAGATCTGCAT 31556373 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||||||||||||||| || | ||||| || | || || ||||| Sbjct 31556627 TGGAGGGTGGATTCCTTTTGAATGTTATAGTCAGCGAGTGTCCGGCCATCCTCTAGTTGC 31556686 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | | ||||||||| || || | ||||||||||| |||| || Sbjct 31556687 TTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGGGGGATACCCTCCTTGTCCTGGATC-TT 31556745 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | |||||| | ||| ||||| ||||| || || | || || || || || || Sbjct 31556746 GGCTTTAACATTGTCAATGGTGTCGGAACTCTCTACATCAAGAGTGATAGTCTTGCCAGT 31556805 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| |||||||| Sbjct 31556806 CAAAGTCTTGACAAAGATCTGCAT 31556829 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || || | ||||| ||||| ||| |||||| || ||||| || || | || || || Sbjct 2778461 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGA 2778520 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || ||||| || |||| |||||| ||||| || || | |||||| Sbjct 2778521 CCATCCTCCAGCTGCTTGCCGGCGAAGATTAGACGCTGCTGGTCTGGGGGAATCCCCTCC 2778580 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | || || || ||| ||||| |||||| || |||| || Sbjct 2778581 TTGTCCTGGATC-TTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACCTCCAGAGT 2778639 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || || || || |||||||| Sbjct 2778640 GATGGTCTTCCCAGTCAAGGTCTTAACGAAGATCTGCAT 2778678 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| |||||| || ||||| || || | ||| || | | || || || || Sbjct 2779388 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGC 2779447 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || ||||| || || | |||||| |||||||| || | ||||||||||| |||| || Sbjct 2779448 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATC-TT 2779506 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | ||| || || |||||| || | ||| || || || ||||| Sbjct 2779507 GGCCTTGACGTTGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGT 2779566 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 || || |||||||| ||||||||| Sbjct 2779567 CAATGTCTTCACAAAGATCTGCATG 2779591 Score = 82.4 bits (90), Expect = 5e-11 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 || |||| || | ||| |||||| ||||| || ||||| || |||| | || ||| Sbjct 31555928 AGGCGCAGGACAAGATGAAGAGTGGATTCCTTCTGGATGTTGTAGTCTGCCAAGGTACGC 31555987 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || || || ||||| || | | ||||||||| || || | |||||| Sbjct 31555988 CCATCCTCTAGCTGCTTCCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGGATGCCCTCC 31556047 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 ||||| |||| || | ||||| | || || || |||||| ||||| | || Sbjct 31556048 TTGTCCTGGATC-TTGGCCTTAACATTGTCGATGGTATCAGAGCTCTCGACTTCAAGTGT 31556106 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || |||| || || ||||| |||||||| Sbjct 31556107 GATAGTCTTTCCAGTTAGGGTCTTGACAAAGATCTGCAT 31556145 >seq6 Length=34615992 Score = 109 bits (120), Expect = 3e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | || || | |||||| ||||| ||| |||||| || ||||| ||||| | Sbjct 32010609 GCCGCCACGGAGGCGGAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGC 32010550 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | || ||||| || ||||| |||||||| | |||||| |||||||| || Sbjct 32010549 AAGGGTACGGCCATCCTCAAGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGG 32010490 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || || | ||| ||||| ||| | Sbjct 32010489 AATGCCCTCCTTGTCCTGGATC-TTCGCCTTCACATTGTCAATAGTGTCGGACGACTCAA 32010431 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || || || || || | || || ||||| |||||||| Sbjct 32010430 CCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCAT 32010382 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || ||||| | | ||| | ||||| ||| |||||| |||||||| ||||| | Sbjct 31537759 CCACCCCTAAGTCTGAGCACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCC 31537818 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || | |||| ||||| || || |||||||| || | |||||| || || || || Sbjct 31537819 AGGGTCCTACCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGG 31537878 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | || || | || ||||| | ||| || Sbjct 31537879 ATTCCCTCCTTGTCCTGGATC-TTCGCCTTCACATTGTCGATCGTGTCCGAGGACTCGAC 31537937 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | || || || || || || || || |||||||| ||||||||| Sbjct 31537938 CTCAAGAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCATG 31537986 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || | | ||||| ||||| || |||||| || ||||| || || | Sbjct 32009469 GCCTCCCCTGAGTCTGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGC 32009410 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || | || ||||| || || || || || || | |||||| ||||| || || Sbjct 32009409 CAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGG 32009350 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || || | ||| ||||| | ||| | Sbjct 32009349 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACATTGTCAATGGTGTCCGAGGACTCAA 32009291 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || | ||| || ||||| ||||| | || |||||||| |||||||| Sbjct 32009290 CCTCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 32009242 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || || | | ||| | |||||| ||| |||||| || ||||| || || | Sbjct 32009697 GCCTCCCCTGAGCCTGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 32009638 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || || || || || || || || | |||||| ||||| || || Sbjct 32009637 CAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGG 32009578 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| |||| || | || ||| | ||| ||||| ||| | Sbjct 32009577 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTGACGTTGTCAATGGTGTCAGACGACTCGA 32009519 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||| || || || || || || || ||||| || ||||||||| Sbjct 32009518 CCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTCACGAAGATCTGCATG 32009469 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/212 (69%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 34497 CACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||| | |||||| ||| ||||| || ||||| ||||| | ||| || || |||| || Sbjct 32009907 CACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCAAGGGTACGGCCGTCCTC 32009848 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 || || || || || || || | |||||| ||||| || || | ||||||||||| Sbjct 32009847 CAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 32009788 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 |||| || | || ||| | ||| ||||| ||| || || | ||| || || | Sbjct 32009787 GATC-TTGGCCTTGACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCT 32009729 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || || | || ||||| || ||||||||| Sbjct 32009728 TGCCAGTCAGGGTCTTCACGAAGATCTGCATG 32009697 >seq5 Length=31082981 Score = 96.9 bits (106), Expect = 2e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34503 ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTG 34562 ||| || ||| |||||| || ||||| || || | ||| || || | ||||| || || Sbjct 26219426 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCTTCGAGCTG 26219367 Query 34563 TTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || ||||| || | |||||| |||||||| || | |||||||||||| ||| || Sbjct 26219366 CTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATTCCCTCCTTGTCCTGGAT-TT 26219308 Query 34623 TTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGG 34681 | | || ||| || ||| || || | ||| || || | |||||| || || || | Sbjct 26219307 TGGCCTTGACGTTATCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAG 26219248 Query 34682 TTAACGTTTTCACAAAAATCTGCAT 34706 | | || ||||| || |||||||| Sbjct 26219247 TGAGAGTCTTCACGAAGATCTGCAT 26219223 Score = 95.1 bits (104), Expect = 8e-15 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||| || |||||||| ||||||| ||| || || | || || ||||| Sbjct 9801847 TGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCAAGGGTGCGGCCATCCTCGAGTTGC 9801906 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | ||||||||||| || || | ||||||||||| ||| || Sbjct 9801907 TTGCCCGCAAAGATGAGGCGCTGTTGGTCAGGTGGAATACCCTCCTTGTC-CTGAATCTT 9801965 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || ||| | || || ||| | ||| || || | |||||| || || || || Sbjct 9801966 GGCCTTGACGTTGTCGATCGTATCTGAGGACTCAACCTCGAGGGTTATGGTCTTGCCAGT 9802025 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | || |||||||| |||||||| Sbjct 9802026 GAGTGTCTTCACAAAGATCTGCAT 9802049 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| |||||| || ||||| || || | ||| || | | || ||||| || Sbjct 26219653 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCAAGCTGC 26219594 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || ||||| || | |||||| ||||| || || | ||||||||||| |||| || Sbjct 26219593 TTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATC-TT 26219535 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || ||||| | ||| || || | |||||| || | ||| || || || ||||| Sbjct 26219534 TGCCTTAACATTGTCAATGGTATCAGAGGACTCCACCTCAAGGGTGATAGTCTTTCCGGT 26219475 Query 34683 TAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| || |||||| Sbjct 26219474 CAAGGTCTTGACAAATATTTGCATG 26219450 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || || || || | |||||| ||||| || |||||| || ||||| || || | | Sbjct 26220133 CCACCCCTGAGGCGGAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCA 26220074 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || || || || ||||| || || || | | ||| |||||||| || Sbjct 26220073 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGG 26220014 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658 | |||||||| || |||||| | || ||| | || |||||| |||||| || Sbjct 26220013 ATGCCCTCCTTATCCTGGATCTTC-GCCTTCACGTTGTCGATGGTGTCTGAGCTCTCAAC 26219955 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || || || | || || || ||||||||||| Sbjct 26219954 CTCCAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACGAAAATCTGCAT 26219907 Score = 91.5 bits (100), Expect = 9e-14 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 || |||||| ||| || |||||||| || |||| | || || | || ||||| || Sbjct 9801619 TGTAGAGTGGACTCTTTCTGAATGTTGTAGTCTGCCAAGGTCCGACCATCCTCAAGCTGC 9801678 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || | ||||||||| || || || | ||||||||||| |||| || Sbjct 9801679 TTGCCAGCGAAGATAAGACGCTGTTGATCTGGGGGGATACCCTCCTTGTCCTGGATC-TT 9801737 Query 34624 TGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 || || ||| | || |||||| | ||| || |||| || || || || || || Sbjct 9801738 TGCCTTCACGTTGTCGATCGTGTCTGAGGACTCAACCTCCAAAGTGATGGTCTTTCCTGT 9801797 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 || || |||||||| |||||||| Sbjct 9801798 CAAGGTCTTCACAAAGATCTGCAT 9801821 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||||||| |||||| |||||||| ||||| | || || || |||| || || || Sbjct 9801391 TGGAGAGTGGACTCCTTCTGAATGTTGTAATCAGCCAGAGTGCGTCCGTCCTCGAGCTGC 9801450 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || ||||| || || | ||||| |||||||| || | ||||||||||| Sbjct 9801451 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTC 9801500 >seq4 Length=33711903 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| |||| || | || || ||| |||||| || ||||| || |||| | Sbjct 30264965 CCTCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCA 30264906 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||| || || |||||||| || | ||||| || || || || Sbjct 30264905 AGGGTACGTCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGATCTGGTGGA 30264846 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| |||| || | || || | |||||||| | ||| || Sbjct 30264845 ATACCCTCCTTGTCCTGGATC-TTGGCCTTCACATTGTCGATTGTGTCAGAGGACTCAAC 30264787 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 |||| ||| || || || ||||| | || ||||| || |||||||| Sbjct 30264786 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 30264739 >seq1 Length=46096743 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| | || || | ||| | || || || |||||| || ||||| || || | Sbjct 27626575 GCCGCCGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGC 27626516 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || ||||| || || || || ||||| || || | ||||| ||||||||||| Sbjct 27626515 CAGCGTGCGTTCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGG 27626456 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| || | || | || ||| | || ||||| |||||||| Sbjct 27626455 GATCCCCTCCTTGTC-CTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCA 27626397 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || | || || || || || || | || ||||| || |||||||| || Sbjct 27626396 CCTCGAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 27626345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729553970796