Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20punctata_20[genbank_20GCA_5F000573905.1_202014-02-25] 12 sequences; 393,816,603 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq1 105 6e-18 seq5 102 7e-17 seq4 98.7 9e-16 seq2 91.5 1e-13 >seq6 Length=34615992 Score = 116 bits (128), Expect = 3e-21 Identities = 156/217 (72%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | |||||| || || ||| ||| || || || || ||||| ||||| || || | Sbjct 32010597 GCGGAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTACGGCC 32010538 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || |||||||| || || |||||||| |||||||||||||| | ||| | || ||| || Sbjct 32010537 ATCCTCAAGCTGCTTACCAGCAAATATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTT 32010478 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| || | | | | || ||| |||||| || || | ||||| Sbjct 32010477 GTCCTGGATCTTCGCCTTCACATTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTGAT 32010418 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATC 39285 | || || ||||| || || |||||||| |||||| Sbjct 32010417 GGTCTTGCCAGTCAGGGTCTTGACAAAGATCTGCATC 32010381 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||| | ||| || ||| || || || || || ||||||||||| || || |||| || Sbjct 32009907 CACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCAAGGGTACGGCCGTCCTC 32009848 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || |||||||||||||| | ||| | || ||| |||||| Sbjct 32009847 CAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 32009788 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || |||| ||| | | | || || |||||| || || | ||||| | | Sbjct 32009787 GATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATGGTCT 32009729 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || ||||| || || || ||||| ||||| Sbjct 32009728 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 32009698 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | | | ||| | ||| || ||| ||| || || || || || || Sbjct 32009700 CATGCCTCCCCTGAGCCTGAGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 32009641 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||| || || || |||| || ||||| ||||| || || || |||||||||||||| | Sbjct 32009640 GGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGG 32009581 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACT 39232 ||| | || ||| |||||| ||| || |||| ||| | | | || || ||||| Sbjct 32009580 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGACGACT 32009522 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || | ||||| | ||||| |||| || || || ||||| ||||| Sbjct 32009521 CGACCTCAAGGGTGATGGTCTTTCCAGTCAAGGTCTTCACGAAGATCTGCAT 32009470 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | | | ||||| || || || ||| || || || || || || Sbjct 32009472 CATGCCTCCCCTGAGTCTGAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTC 32009413 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 ||| || || || | || |||||||| ||||| || || || |||||||||||||| | Sbjct 32009412 GGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGG 32009353 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || ||| |||||| ||| || |||| | | | || || ||||| Sbjct 32009352 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAGGACTC 32009293 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 || || | ||||| |||| || || || || || |||||||| ||||||| Sbjct 32009292 AACCTCGAGGGTGATGGTTTTGCCGGTGAGGGTCTTCACAAAGATCTGCATCT 32009240 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 39075 CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATC 39134 ||||| || || ||| ||| || || || || || || ||||| || || |||| || Sbjct 32010135 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCGTCCTC 32010076 Query 39135 AAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||| ||||| || || || |||||||||||||| | ||| | || || |||||| Sbjct 32010075 TAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCTTCCTTGTCCTG 32010016 Query 39195 GATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253 ||| || || | ||| | | | ||| || ||||| || || | |||||| | | Sbjct 32010015 GATCTTGGCCTTCA-CGTTGTCGATCGTGTCTGAGGACTCGACCTCGAGCGTGATGGTCT 32009957 Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || ||||| || || || ||||| ||||| Sbjct 32009956 TGCCAGTCAGGGTCTTGACGAAGATCTGCAT 32009926 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || ||||| || || || | |||| |||||||| Sbjct 31537783 TGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTACCGTCCTCAAGCTGC 31537842 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| ||||| || ||||||||||| || | || | | ||| |||||| ||| ||| Sbjct 31537843 TTGCCGGCAAAGATGAGACGCTGCTGATCAGGAGGGATTCCCTCCTTGTCCTGGATCTTC 31537902 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | ||| || ||||| || || | ||||| | ||||| ||| Sbjct 31537903 GCCTTCACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCTGTC 31537962 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 | || || |||||||| ||||| Sbjct 31537963 AAGGTCTTCACAAAGATCTGCAT 31537985 >seq1 Length=46096743 Score = 105 bits (116), Expect = 6e-18 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 39052 TTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAA 39111 |||| ||| || | | ||| | ||| | || ||||| ||| || || || || || Sbjct 27626580 TTCAGGCCGCCGCGGAGGCGGAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAG 27626521 Query 39112 TCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCG 39171 ||||| || || |||||||| || ||||| ||||| || || || || ||||||||||| Sbjct 27626520 TCGGCCAGCGTGCGTTCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCC 27626461 Query 39172 GTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGAC 39231 | || | | ||| |||||| | ||| |||| || | ||| ||||| | Sbjct 27626460 GGCGGGATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTC 27626401 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 ||||| || | |||||| | || |||||||| || || || ||||| |||||||| Sbjct 27626400 TCCACCTCGAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 27626345 Score = 102 bits (112), Expect = 7e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||||| || || ||| ||| || || || || || ||||| || || || | Sbjct 12788223 GCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCC 12788282 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || || ||||||||||| | ||| | | || || Sbjct 12788283 GTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTT 12788342 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247 |||| ||| ||| || | ||| | | | || || |||||||| |||| ||||| Sbjct 12788343 GTCCTGGATCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGA 12788401 Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 | | || |||||||| || || || ||||| |||||||| Sbjct 12788402 TGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTT 12788441 >seq5 Length=31082981 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| || | ||| | || | || || ||| ||| || || || || || || ||| Sbjct 26219677 CCTCCCCTGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCA 26219618 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || | | || |||||||| ||||| ||||| || |||||||||||||| | ||| Sbjct 26219617 AGGGTCCTGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGGGGA 26219558 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCAC 39236 | || ||| |||||| ||| || || | | | | | | | ||||| |||||||| Sbjct 26219557 ATGCCCTCCTTGTCCTGGATCTT-TGCCTTAACATTGTCAATGGTATCAGAGGACTCCAC 26219499 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | |||||| | ||||| |||| || || ||||| |||||||| Sbjct 26219498 CTCAAGGGTGATAGTCTTTCCGGTCAAGGTCTTGACAAATATTTGCAT 26219451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || ||||| || || || | || || ||||| Sbjct 3229947 TGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGC 3229888 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || || ||||||||||||| ||| | | || |||||| ||| || Sbjct 3229887 TTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCCTGGATCTTG 3229828 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 || | ||| | | | || || |||||||| |||| |||||| | || ||||| Sbjct 3229827 GCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGT 3229769 Query 39261 CAGCGTTTTAACAAAGATTTGCATCTT 39287 ||| || || || ||||| |||||||| Sbjct 3229768 CAGGGTCTTCACGAAGATCTGCATCTT 3229742 Score = 91.5 bits (100), Expect = 1e-13 Identities = 163/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 39054 CAAGCCTCCTCTTAAGCGTAA-CACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAAT 39112 || |||||| || | || ||| ||| | ||||| ||| |||||| || || || || | Sbjct 9801591 CATGCCTCCCCTCA-GCCTAAGCACAAGGTGTAGAGTGGACTCTTTCTGAATGTTGTAGT 9801649 Query 39113 CGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGG 39172 | || | || || | || |||||||| ||||| || || ||||||||||| || || | Sbjct 9801650 CTGCCAAGGTCCGACCATCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGTTGATCTG 9801709 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGAC 39231 ||| | | ||| |||||| ||| || || | ||| | | | ||| || ||| Sbjct 9801710 GGGGGATACCCTCCTTGTCCTGGATCTT-TGCCTTCACGTTGTCGATCGTGTCTGAGGAC 9801768 Query 39232 TCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || |||| ||||| | ||||| |||| || || |||||||| ||||| Sbjct 9801769 TCAACCTCCAAAGTGATGGTCTTTCCTGTCAAGGTCTTCACAAAGATCTGCAT 9801821 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| || | ||| | || | || || ||| |||||| || || || ||||| ||| Sbjct 9801823 CCTCCCCTGAGGCGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCTGCA 9801882 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || || ||||||||||| || || ||||| ||||| | || Sbjct 9801883 AGGGTGCGGCCATCCTCGAGTTGCTTGCCCGCAAAGATGAGGCGCTGTTGGTCAGGTGGA 9801942 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCAC 39236 | | ||| |||||| || || |||| ||| | | | |||||| ||||| || Sbjct 9801943 ATACCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTGTCGATCGTATCTGAGGACTCAAC 9802001 Query 39237 GTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTTAC 39290 || | || || | || || || || || || |||||||| ||||||| ||| Sbjct 9802002 CTCGAGGGTTATGGTCTTGCCAGTGAGTGTCTTCACAAAGATCTGCATCTGTAC 9802055 Score = 86.0 bits (94), Expect = 5e-12 Identities = 164/242 (68%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104 |||| | | || |||||| | | ||| | || | ||| || ||| ||| || || || Sbjct 26219462 AAATATTTGCATGCCTCCCCGGAGGCGGAGGACAAGATGAAGGGTGGACTCCTTCTGGAT 26219403 Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164 || || || ||||| || || | || || ||||| ||||| ||||| || |||||||| Sbjct 26219402 GTTGTAGTCAGCAAGAGTGCGGCCATCTTCGAGCTGCTTGCCAGCAAAGATGAGACGCTG 26219343 Query 39165 CTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC 39224 |||||| | || | | ||| |||||| |||||| |||| | | | ||||| Sbjct 26219342 CTGGTCCGGAGGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTATCAATGGTATC 26219283 Query 39225 GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| || || | || || | || || || || || || || ||||| ||||| Sbjct 26219282 CGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACGAAGATCTGCAT 26219223 Query 39285 CT 39286 || Sbjct 26219222 CT 26219221 >seq4 Length=33711903 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || |||||||| ||||| || || | || |||||||| ||||| || || Sbjct 30264474 CTCCTTCTGGATGTTATAATCCGCAAGAGTACGCCCATCCTCAAGCTGCTTGCCAGCGAA 30264415 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 ||||| ||||||||||| | || | || ||| |||||| || || || | | Sbjct 30264414 GATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACATT 30264355 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | ||||||| ||||| || |||| ||||| | || || || || || ||||| Sbjct 30264354 GTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTCTTAAC 30264295 Query 39273 AAAGATTTGCATCT 39286 ||| || ||||||| Sbjct 30264294 AAATATCTGCATCT 30264281 >seq2 Length=39559433 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || || || || ||||| || | | || || ||||| Sbjct 2779388 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGC 2779447 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||| | ||| | || ||| |||||| ||| || Sbjct 2779448 TTGCCGGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTG 2779507 Query 39202 TGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| ||| | | | ||||| |||||||| || | |||||| | || || || Sbjct 2779508 GCCTTGA-CGTTGTCAATGGTATCAGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGT 2779566 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || || || |||||||| ||||| Sbjct 2779567 CAATGTCTTCACAAAGATCTGCAT 2779590 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || || || || | | || |||||||| ||||| ||||| Sbjct 2779171 CTCCTTCTGGATGTTGTAGTCAGCGAGGGTCCTGCCATCCTCAAGCTGCTTGCCGGCAAA 2779230 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||| || |||| ||| Sbjct 2779231 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 2779289 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || || || ||||| || | ||||| | || || ||||| || || | Sbjct 2779290 TGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTGA 2779349 Query 39272 CAAAGATTTGCAT 39284 ||||||| ||||| Sbjct 2779350 CAAAGATCTGCAT 2779362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545537178956