Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq5 125 8e-24 seq2 125 8e-24 seq1 122 1e-22 seq6 116 4e-21 seq4 116 4e-21 seq7 98.7 1e-15 seq8 87.8 2e-12 >seq5 Length=26652778 Score = 125 bits (138), Expect = 8e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||||| ||||| ||| |||||| || || |||||||| || | || || | Sbjct 7980587 ACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCTAAGGTGCGGCC 7980646 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || |||||||| ||||| || || || |||||||| || | || | ||||||||| Sbjct 7980647 ATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTT 7980706 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | |||| || ||| | | | ||||| ||| || || || | || | Sbjct 7980707 GTCC-TGAATCTTTGCTTTTACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAA 7980765 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 |||||||||| || | ||||| ||||||||||||||| Sbjct 7980766 TGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCATT 7980803 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || |||||||| || ||||| Sbjct 3217355 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3217296 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | ||||||||| ||| || || | ||| Sbjct 3217295 GATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCA-CGT 3217237 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | ||||||||| || ||||| || ||||| | Sbjct 3217236 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCA 3217177 Query 43171 CAAAGATTTGCATTTT 43186 | ||||| ||||| || Sbjct 3217176 CGAAGATCTGCATCTT 3217161 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| ||||| || || ||| | || || |||||||| |||||||| Sbjct 21799505 TCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCAAGCTGCTTGCCAGCGAAG 21799446 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 21799445 ATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACATTG 21799386 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | || || || || || || | || ||||| ||||| || || ||||| ||| Sbjct 21799385 TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTTCACA 21799326 Query 43173 AAGATTTGCAT 43183 ||||| ||||| Sbjct 21799325 AAGATCTGCAT 21799315 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||| |||| || | || | || | ||| |||||| || || ||||| ||||| Sbjct 21799770 TCCTCCCCTTAGGCGGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 21799711 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || |||| | || || |||||||| ||||| || || || ||||||||||| | || Sbjct 21799710 AAGGGTCCTACCATCCTCGAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGG 21799651 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCA 43134 | | |||||||||| || | |||| | | ||| | | | || || || || | Sbjct 21799650 AATCCCCTCCTTGTCC-TGGATCTTTGCCTTAACGTTGTCAATAGTATCAGAAGACTCAA 21799592 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || | ||||| || ||||| || | ||||| |||||||||||||| Sbjct 21799591 CCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 21799543 Score = 93.3 bits (102), Expect = 5e-14 Identities = 143/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTA-CCAGCGA 43050 ||| || ||||| |||||||| || || || || |||| || || ||||| || || | Sbjct 7981067 CTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCAAGTTGCTTTGCCCGCAA 7981126 Query 43051 ATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGC 43109 | ||||| ||||||||||| | || | | |||||||||| ||| | || | |||| Sbjct 7981127 AGATGAGGCGCTGCTGGTCAGGTGGAATTCCCTCCTTGTCC-TGAATCTTGGCCTTGACA 7981185 Query 43110 GTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 | | | |||||| || || || || | || ||||| ||||| || || ||||| Sbjct 7981186 TTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCTTGCCAGTGAGTGTCTTC 7981245 Query 43170 ACAAAGATTTGCATTTTTAC 43189 |||||||| ||||| | ||| Sbjct 7981246 ACAAAGATCTGCATCTGTAC 7981265 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | || |||||| ||||| ||||| || || || || || | || || Sbjct 21800208 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGTCCATCCTC 21800149 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||||||||||||||| ||||||| ||||||||| | || | || |||||| ||| Sbjct 21800148 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 21800089 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 43149 ||| || || | ||| | | | ||||| |||| || || || | || || | Sbjct 21800088 GATCTTCGCCTTCA-CGTTGTCAATGGTGTCTGAGCTC---TCAACCTCCAGGGTAATAG 21800033 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | ||||| || || ||||| || || || |||||| Sbjct 21800032 TCTTGCCAGTGAGAGTCTTGACGAAAATCTGCATT 21799998 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || |||||||| |||||||| | || |||| || |||||||| || ||||| Sbjct 7980839 CTCCTTGTGGATATTGTAGTCAGCCAGGGCGCGTCCGTCCTCGAGCTGCTTGCCGGCGAA 7980898 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 |||| ||||||||||| || | || |||||||||| ||| | || | || | Sbjct 7980899 GATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCCTTGTCC-TGAATCTTCGCCTTCACAT 7980957 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || || || || | ||| ||||| || || || || ||||| | Sbjct 7980958 TGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTTTCCGGTCAGGGTCTTGA 7981017 Query 43171 CAAAGATTTGCAT 43183 |||| || ||||| Sbjct 7981018 CAAAAATCTGCAT 7981030 Score = 86.0 bits (94), Expect = 7e-12 Identities = 67/79 (85%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 60054 ATGAAAAATTT-TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 ||| ||||||| || || || ||| ||||||||| |||| |||||||||||||||| Sbjct 21671238 ATGTAAAATTTGTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGA 21671179 Query 60113 ATACTCACCACTATACTAC 60131 ||||||||||||||||||| Sbjct 21671178 ATACTCACCACTATACTAC 21671160 >seq2 Length=33962743 Score = 125 bits (138), Expect = 8e-24 Identities = 145/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| |||| || |||||||| || || || Sbjct 3067636 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAA 3067695 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 3067696 GATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 3067754 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| |||||||| |||| |||||||| ||||| || || ||||| | Sbjct 3067755 TGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCTTGA 3067814 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 3067815 CAAAGATCTGCAT 3067827 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| ||||| || Sbjct 3067408 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAA 3067467 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 3067468 GATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 3067527 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | || || || ||||| |||| |||||||| ||||| || || ||||| || Sbjct 3067528 GTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTCAC 3067587 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 3067588 GAAGATTTGCAT 3067599 Score = 104 bits (114), Expect = 3e-17 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || | || || |||||||| || ||||| Sbjct 3067180 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3067239 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 3067240 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 3067298 Query 43112 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 43167 | | | ||||| |||| || || || | |||||||| ||||| || || |||| Sbjct 3067299 TGTCGATGGTGTCCGAGCTC---TCAACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCT 3067355 Query 43168 TTACAAAGATTTGCAT 43183 | |||||||| ||||| Sbjct 3067356 TGACAAAGATCTGCAT 3067371 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || |||| | || || |||||||| |||||||| Sbjct 3068174 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCAGCGAA 3068233 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||| || ||| || |||| | Sbjct 3068234 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTGACATT 3068293 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || ||||| |||| ||||| || ||||| || | ||||| || Sbjct 3068294 ATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTCTTCAC 3068353 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 3068354 AAAGATCTGCAT 3068365 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 43005 TTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGC 43064 ||||| ||||| || |||| | || || |||||||| || ||||| ||||| |||||| Sbjct 3067959 TTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGC 3068018 Query 43065 TGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC 43123 ||||| | || | || ||| |||||| ||| || |||| ||| | | | ||||| Sbjct 3068019 TGGTCTGGGGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATGGTGTC 3068077 Query 43124 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || | ||||| || ||||| || || ||||| |||||||| ||||| Sbjct 3068078 AGAAGACTCCACCTCAAGGGTGATAGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCAT 3068137 >seq1 Length=39866532 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| |||| || |||||| || || ||||| || ||||| || ||| |||| || Sbjct 23562485 CACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGCGTGCGCCCGTCCTC 23562426 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| ||||| ||||||||||| | ||| | | |||||||||| Sbjct 23562425 CAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGGATCCCCTCCTTGTCCTG 23562366 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | || |||| || | ||||||||| ||||| || | ||||||||| || Sbjct 23562365 CACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACCTCCAGCGTGATGGTCTT 23562306 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || ||||| || ||||| ||||| Sbjct 23562305 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 23562276 Score = 118 bits (130), Expect = 1e-21 Identities = 150/203 (74%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || ||| |||| || |||||||| || ||||| Sbjct 11683528 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAA 11683587 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||||| ||| | | |||||||||| ||| || || | ||| Sbjct 11683588 GATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCA-CGT 11683646 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| || ||||| || | |||||| || || ||||| || ||||| | Sbjct 11683647 TGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCA 11683706 Query 43171 CAAAGATTTGCATTTTTACGCCG 43193 | ||||| ||||| || ||||| Sbjct 11683707 CGAAGATCTGCATCTT--CGCCG 11683727 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||| | |||| || || ||| ||||||||| |||| |||||||||||||||| |||| Sbjct 30488945 AAACAATTTCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGGAATAC 30489004 Query 60117 TCACCACTATACTAC 60131 ||||||||||||||| Sbjct 30489005 TCACCACTATACTAC 30489019 >seq6 Length=27870862 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || ||||| || || | || || |||||||| |||||||| Sbjct 25465212 CTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 25465153 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 25465152 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 25465093 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||| || || || | |||||||| ||||| || || ||||| || Sbjct 25465092 GTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCAC 25465033 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 25465032 AAAGATCTGCAT 25465021 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| || | |||| |||||| || || |||||||| || || || || | || || Sbjct 25466598 CACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTC 25466539 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||||||||| || || || ||||||||||| | || | || |||||||||| Sbjct 25466538 AAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 25466479 Query 43094 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 ||| || || | ||| | | | |||||| ||| || || || | || ||||| | Sbjct 25466478 GATCTTCGCCTTCA-CGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCT 25466420 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || ||||| || ||||| ||||| Sbjct 25466419 TGCCAGTCAGGGTCTTCACGAAGATCTGCAT 25466389 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| |||||||| Sbjct 25466124 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAA 25466065 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || | ||| Sbjct 25466064 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 25466006 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || || | || ||||| ||||| || || ||||| | Sbjct 25466005 TGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCA 25465946 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 25465945 CGAAGATCTGCAT 25465933 Score = 109 bits (120), Expect = 6e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 25465667 TCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAG 25465608 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | || |||||||||| ||| || || | ||| Sbjct 25465607 ATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA-CGTT 25465549 Query 43113 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| || || || |||| |||||||| ||||| || || ||||| || Sbjct 25465548 GTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 25465489 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 25465488 GAAGATCTGCAT 25465477 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||||| || || | || || |||||||| || ||||| Sbjct 25466352 CTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 25466293 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||||||| ||| || || | ||| Sbjct 25466292 GATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCA-CGT 25466234 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| || || || || | ||||||||| ||||| || || ||||| | Sbjct 25466233 TGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTGA 25466174 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 25466173 CGAAGATCTGCAT 25466161 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| ||||| || || || | || || |||||||| || ||||| Sbjct 25465440 CTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAA 25465381 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 25465380 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 25465321 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| ||| || || || | |||||||| ||||| || | ||||| || Sbjct 25465320 GTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTGAC 25465261 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 25465260 GAAGATCTGCAT 25465249 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || || || || || |||| || |||||||| || ||||| Sbjct 25465896 CTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAA 25465837 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 25465836 GATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 25465777 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 25465776 GTCGATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCAGTCAGGGTCTTGAC 25465717 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 25465716 GAAGATCTGCAT 25465705 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||| ||||| ||| |||||| ||||| |||||||||||||| || || | || || Sbjct 24976910 CACCAGGTGCAAGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGTGTACGTCCATCCTC 24976969 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| | || || ||||| ||||||||||| | || | | |||||||||| | Sbjct 24976970 GAGCTGCTTGTCTGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC-T 24977028 Query 43094 GATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 || | || | || | | | | | |||| || || || | | |||||||| | Sbjct 24977029 GAATCTTCGCCTTCACATTGTCGATCTTGTCCGAGGACTCGACCGCAAGAGTGATGGTCT 24977088 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || | ||||| |||||||| ||||| Sbjct 24977089 TTCCTGTCAAGGTCTTCACAAAGATCTGCAT 24977119 >seq4 Length=30521686 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||| ||| |||||| || || || || ||||| || || || |||| || Sbjct 27324626 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 27324567 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| |||||||| ||||| ||||||||||| | || | | |||||||||| | Sbjct 27324566 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGG 27324507 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || || | | | | |||||| || || || || | ||||| || ||| Sbjct 27324506 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 27324447 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || || || ||||| |||||||| ||||| Sbjct 27324446 CCAGTAAGGGTCTTCACAAAGATCTGCAT 27324418 Score = 109 bits (120), Expect = 6e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || || |||||||| || || || || | || || |||||| Sbjct 27324848 TGCAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGC 27324789 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || |||||||| ||||| ||||||||||| | || | | |||||||||| ||| || Sbjct 27324788 TTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTG 27324729 Query 43101 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 43160 || | | | | |||||| ||| || || || | |||||||| ||||| || Sbjct 27324728 GCCTTCACATTGTCGATCGTGTCAGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTG 27324669 Query 43161 AGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| Sbjct 27324668 AGGGTCTTCACGAAGATCTGCAT 27324646 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 |||||||| || ||||| || || || || || | || || |||||||| ||||| || Sbjct 27324380 TCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAG 27324321 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112 ||||| ||||||||||| | || | | |||||||||| ||| || || | | Sbjct 27324320 ATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTA 27324261 Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||| || || || || | || ||||| ||||| || || ||||| || Sbjct 27324260 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACG 27324201 Query 43173 AAGATTTGCAT 43183 || |||||||| Sbjct 27324200 AATATTTGCAT 27324190 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 42981 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 43040 |||| ||| |||||| || || || || || || || || || | || || |||||| Sbjct 27325076 TGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGC 27325017 Query 43041 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTT 43100 || || ||||| ||||| ||||||||||| | || | || |||||| ||| ||| || Sbjct 27325016 TTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTG 27324957 Query 43101 TGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 || | ||| | | | ||||| ||||| || || | |||||||| ||||| || Sbjct 27324956 GCCTTCA-CGTTGTCGATGGTGTCAGAGGATTCAACCTCCAGAGTGATGGTCTTGCCAGT 27324898 Query 43160 TAGCGTCTTTACAAAGATTTGCAT 43183 || ||||| || ||||| ||||| Sbjct 27324897 GAGGGTCTTCACGAAGATCTGCAT 27324874 >seq7 Length=26200591 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| ||||| || || | | || || |||||||| || ||||| Sbjct 10980392 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCATCCTTCCTCGAGCTGCTTGCCGGCGAA 10980451 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || |||||| || ||| || || | | Sbjct 10980452 GATGAGGCGCTGCTGGTCTGGTGGAATGCCCTCCTTATCTTGGATCTTCGCCTTCACATT 10980511 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | |||||| || ||||| || | ||||||| ||||| || || ||||| || Sbjct 10980512 GTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCAC 10980571 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 10980572 AAAGATCTGCAT 10980583 >seq8 Length=25958679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/192 (70%), Gaps = 13/192 (7%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| ||||| || || || | || || |||||||| |||||||| Sbjct 4541979 CTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCGTCCTTCCTCGAGCTGCTTGCCAGCGAA 4542038 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | | |||||| ||| ||| || || Sbjct 4542039 GATGAGGCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTT---------CGC 4542089 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | ||| ||||| | | || || | ||||||| ||||| || || || || || Sbjct 4542090 CTTCACATTGTCGATTGTGTC----TCAAGGGTGATGGACTTGCCGGTCAGGGTTTTCAC 4542145 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 4542146 AAAGATCTGCAT 4542157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571790310005040