Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq6 116 3e-21 seq5 107 2e-18 seq4 98.7 8e-16 seq2 96.9 3e-15 seq7 87.8 2e-12 >seq6 Length=27870862 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||| || || || ||| ||||| || || ||| Sbjct 25465217 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 25465158 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct 25465157 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 25465098 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || ||||| || | ||| | || |||||||| || || Sbjct 25465097 ACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 25465038 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 25465037 TTCACAAAGATCTGCAT 25465021 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| ||| | || || || || || || || || Sbjct 25465673 GTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCG 25465614 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct 25465613 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 25465554 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | ||| ||||| || | ||| | || ||||||||||| || Sbjct 25465553 ACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTC 25465494 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 25465493 TTGACGAAGATCTGCAT 25465477 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | || || ||| ||||| || |||||| Sbjct 25466585 GTGGACTCCTTCTGGATGTTGTAATCCGCAAGGGTGCGGCCATCCTCAAGCTGCTTACCA 25466526 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| |||||||| |||||||| || ||||| || ||||| ||||| || Sbjct 25466525 GCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTC 25466466 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| || || || || | ||| | || ||||| ||||| || Sbjct 25466465 ACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTC 25466406 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 25466405 TTCACGAAGATCTGCAT 25466389 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||||||||| | || || ||| || ||||| || ||| Sbjct 24977151 GTGGACTCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCATCCTCTAGTTGCTTGCCA 24977210 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||||||||| || ||||| || |||||||| || ||||| |||||| || Sbjct 24977211 GCAAAGATGAGACGTTGCTGGTCAGGTGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTC 24977270 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || || | ||| || || || | ||| | || ||||| || || || Sbjct 24977271 ACATTGTCAATTGTATCAGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTGAGTGTC 24977330 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 24977331 TTCACAAAGATCTGCAT 24977347 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || || || || || || || ||| Sbjct 25466129 GTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCA 25466070 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct 25466069 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 25466010 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| || || || || | ||| | || ||||| ||||| || Sbjct 25466009 ACGTTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTC 25465950 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 25465949 TTCACGAAGATCTGCAT 25465933 Score = 86.0 bits (94), Expect = 5e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACG 114223 || |||| || ||||| | ||| || ||||| |||||||||||||| ||| || ||||| Sbjct 23628867 AGCCTCAGGACCAAATGGAGCGTTGACTCTTTCTGAATGTTGTAATCAGCTAAT-GTACG 23628809 Query 114224 AGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283 |||||| ||||| || || ||| | || || | || ||||| || ||||| || || Sbjct 23628808 TCCATCTTCCAGTTGCTTCCCTGCGAAAATCAGCCTTTGCTGGTCTGGGGGAATACCCTC 23628749 Query 114284 TTTGTC 114289 |||||| Sbjct 23628748 TTTGTC 23628743 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | || || ||| || || || || || Sbjct 25465445 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCG 25465386 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| || || ||||| || ||||| ||||| || Sbjct 25465385 GCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 25465326 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | || ||||| || | ||| | || ||||| |||| || Sbjct 25465325 ACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 25465266 Query 114366 TTTACAAAAATCTGCATGGCT 114386 || || || ||||||||| || Sbjct 25465265 TTGACGAAGATCTGCATGCCT 25465245 >seq5 Length=26652778 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| || | || || ||||||||| || || ||| Sbjct 21799511 GTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCAAGCTGCTTGCCA 21799452 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| |||||||| || || || || ||||| ||||| ||| Sbjct 21799451 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTT 21799392 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| || | ||| || || || | ||| | || ||||| || ||||| Sbjct 21799391 ACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTC 21799332 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 21799331 TTCACAAAGATCTGCAT 21799315 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 || || || || || ||||||||||| ||| | || || ||| || || || || || Sbjct 7980606 GTGGACTCCTTCTGGATGTTGTAATCTGCT-AAGGTGCGGCCATCCTCGAGCTGCTTGCC 7980664 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || ||||| || ||||| ||||||| || ||||| ||||||| ||| Sbjct 7980665 AGCAAAGATCAGGCGCTGCTGATCCGGGGGAATGCTCTCCTTGTCCTGAATCTTTGCTTT 7980724 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 || | |||| ||||| | || || || |||| ||| | ||||||||||||| || Sbjct 7980725 TACGTTGTCAATTGTGTCTGACGACTCAACCTCCAGGGTAATGGTTTTGCCGGTCAATGT 7980784 Query 114365 TTTTACAAAAATCTGCAT 114382 || ||||| || ||||| Sbjct 7980785 CTTGACAAAGATTTGCAT 7980802 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || || |||| ||||| || || ||||||||||| ||| | || || ||| || Sbjct 21800207 ACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGTCCATCCTCC 21800148 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || ||||||||| ||||||| | ||| |||||||| || ||||| || || || Sbjct 21800147 AGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTGG 21800088 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | |||| |||||| | | || || |||| ||| | || ||| Sbjct 21800087 ATCTTCGCCTTCACGTTGTCAATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCTTG 21800028 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || ||||| || || ||||||||||| Sbjct 21800027 CCAGTGAGAGTCTTGACGAAAATCTGCAT 21799999 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG-TTTACC 114244 || || ||||| |||||||||||||| | || || || |||||||| ||| || Sbjct 7981062 GTGGACTCTTTCTGAATGTTGTAATCTGCGAGGGTGCGTCCGTCCTCAAGTTGCTTTGCC 7981121 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || ||||||| ||||| ||||| || ||||| || || ||||| |||||| || Sbjct 7981122 CGCAAAGATGAGGCGCTGCTGGTCAGGTGGAATTCCCTCCTTGTCCTGAATCTTGGCCTT 7981181 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| ||||| | ||| || || || | ||| | || ||||| || || || Sbjct 7981182 GACATTGTCAATCGTGTCAGAGGACTCAACCTCTAGGGTTATGGTCTTGCCAGTGAGTGT 7981241 Query 114365 TTTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 7981242 CTTCACAAAGATCTGCAT 7981259 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || ||||||||||| ||| | ||||| |||||| || || || || Sbjct 21800423 GTAGACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTCCAGCTGCTTGCCG 21800364 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || ||||| ||||| || ||||| ||||| ||||| ||||| || Sbjct 21800363 GCGAAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTAGCCTTC 21800304 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| |||| | || || |||| || | || ||||| || ||||| Sbjct 21800303 ACATTGTCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTCTTGCCAGTAAGAGTC 21800244 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 21800243 TTGACGAAGATCTGCAT 21800227 >seq4 Length=30521686 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || ||||| ||||| | |||||| ||| ||||| || || ||| Sbjct 27324158 GTGGACTCCTTCTGGATGTTATAATCCGCGAGAGTACGCCCATCCTCAAGCTGCTTGCCA 27324099 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || || || ||||||||||| ||||| || ||||| |||||| || Sbjct 27324098 GCGAAGATAAGGCGTTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTC 27324039 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || |||| ||| || || |||| ||| | || ||||| || || || Sbjct 27324038 ACATTGTCAATCGTATCGGAGGACTCAACCTCCAAGGTGATGGTCTTGCCAGTGAGGGTC 27323979 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 27323978 TTAACGAATATCTGCAT 27323962 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 |||||||| || || | || || | || | || ||||| ||||| |||||||| || Sbjct 27324419 ATACCGCCCCGGAGGCGCAGGACAAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCT 27324360 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || ||||| ||||||||||||| ||||| || Sbjct 27324359 GCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCTGGT 27324300 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| ||||| || | | || | ||||||| ||| ||| Sbjct 27324299 GGGATTCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCGATCGTGTCGGAGGACTCG 27324240 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||| ||| | || |||||||| || || || || || || |||||| || Sbjct 27324239 ACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTCTTCACGAATATTTGCATGCCT 27324186 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | || | || || || || || ||||||||||| Sbjct 27324875 ATACCTCCACGAAGGCGCAGGACAAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAATCT 27324816 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| ||||| || || |||||| ||||||| ||||| ||||| || Sbjct 27324815 GCAAGGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCTGGT 27324756 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | || | ||||| | || || Sbjct 27324755 GGAATACCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCA 27324696 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || |||||||| || || || || || |||||||| Sbjct 27324695 ACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 27324646 >seq2 Length=33962743 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 114228 TCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTG 114287 || ||||| || || || || ||||||||||||| |||||||| |||||||| || ||| Sbjct 3067673 TCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTG 3067732 Query 114288 TCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACC 114347 || ||||| || | | || | |||||| | ||||| || || | ||| | Sbjct 3067733 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATG 3067792 Query 114348 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || ||||||||||| || || ||||| ||||||||| Sbjct 3067793 GTCTTGCCGGTCAGTGTCTTGACAAAGATCTGCATG 3067828 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||| || || || || || ||| ||||||||||||| ||||| || || ||||| ||||| Sbjct 3067982 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCTTT 3068041 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| || | | || | |||||| | || || || || | ||| | Sbjct 3068042 GTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGAT 3068101 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||||||||||||| || ||||| ||||||||| Sbjct 3068102 AGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATG 3068138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||| || || || || |||||| ||||||||||||| |||||||| || ||||| || || Sbjct 3068210 ATCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTT 3068269 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 || ||||| || | | || | |||||| | ||| || || || | ||| | Sbjct 3068270 ATCTTGGATCTTAGCCTTGACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGAT 3068329 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||||||||| || || ||||| |||||||| Sbjct 3068330 AGTCTTGCCGGTCAATGTCTTCACAAAGATCTGCAT 3068365 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | ||||| || || || |||||||| ||| Sbjct 3067142 ATACCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 3067201 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || || ||| ||||||||||||| ||||| || Sbjct 3067202 GCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGG 3067261 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | |||||| | | || Sbjct 3067262 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGCTCTCA 3067321 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || ||||| || || || || ||||| |||||||| Sbjct 3067322 ACCTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3067371 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||| || || || || ||||| ||||||| ||||| |||||||| |||||||| || || Sbjct 3067444 ATCCTCCAGCTGCTTGCCAGCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 3067503 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| || | | || | ||| || | || || || || | ||| | Sbjct 3067504 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGAT 3067563 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 114386 || |||||||||||||| || || || || |||||| || Sbjct 3067564 GGTCTTGCCGGTCAGAGTCTTCACGAAGATTTGCATGCCT 3067603 >seq7 Length=26200591 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || | | || | ||| | || || || || ||||||||||| || Sbjct 10980356 ACCACCACGGAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGC 10980415 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || | || || || || || || ||| ||||||| ||||| ||||| || || Sbjct 10980416 AAGGGTGCATCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGTGG 10980475 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 |||||| || || || ||||| || | | || | |||||||| ||| || || Sbjct 10980476 AATGCCCTCCTTATCTTGGATCTTCGCCTTCACATTGTCGATGGTGTCGGAGGACTCCAC 10980535 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | | |||||||||||||| || ||||| |||||||| Sbjct 10980536 CTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 10980583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420114850358616