Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq6 149 6e-31 seq5 98.7 1e-15 seq2 98.7 1e-15 seq1 98.7 1e-15 seq7 89.7 5e-13 >seq6 Length=27870862 Score = 149 bits (164), Expect = 6e-31 Identities = 497/754 (66%), Gaps = 22/754 (3%) Strand=Plus/Minus Query 52092 GACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGCATCGTG 52151 ||||||||| | || ||| |||||| | || |||||||||||| |||| |||||||| Sbjct 7611072 GACGAGCGCCACTTCATCTCCCACGTGCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTG 7611013 Query 52152 AACATTAACCTCA--TCGAG-TACATGCAGCGGAACGTTCCGGAACTCGAGGCGCAATAC 52208 | |||||| || || | |||| || |||| | || |||||||| | Sbjct 7611012 CTCGAGAACCTCGCCTCCAGGTTCATGTC-CG--ACGTGCAGGTCGCCGAGGCGCGCGCC 7610956 Query 52209 TTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATT 52268 || || || || | ||||||| | | ||| | ||||||||| ||||| | Sbjct 7610955 TTCTACGGATTCCAGATCGCCATCGAGAACATCCACTCCGAGATGTACTCGCTGCTGCTC 7610896 Query 52269 GAGCAGCTG-ATAAAAGATGAGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCACGT 52327 ||| | || || || | |||| ||| |||| | || |||| ||| Sbjct 7610895 GAG-ACCTACATCCGCGACGGCGCCGAGAAGGACCGGCTGTTCCGCGCCATCGACACCGT 7610837 Query 52328 GCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGAC-ACCGCCA 52386 ||| ||| ||| ||||| | ||||| ||| |||||||| ||| | | ||| Sbjct 7610836 CCCGGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGACGGCGGCGAGCGCTT 7610777 Query 52387 CGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCT 52446 ||| ||||||| | || ||||||||| |||||||| | || || || ||| || Sbjct 7610776 CGC----CGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCT 7610721 Query 52447 TTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACG 52506 | ||||||||| | | || | | || | ||||| ||||| || ||| ||||| Sbjct 7610720 TCTGCGCCATCTTCTGGCTCAAGAAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACG 7610661 Query 52507 AGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGC 52566 || | || || |||||||| || |||||| ||||| || |||||| |||| ||| | Sbjct 7610660 AGCTCATCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTAC--GAC-C 7610604 Query 52567 GCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGCGGTGGCT 52625 | | || || | || || | || | ||| || || || || || | Sbjct 7610603 TCCTCCGCGGCAAGCTCGACGAGGCGCGCGTCCGCGAG-ATCGTCGCCGACGCCGTCGAC 7610545 Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 ||||| | |||||| | | |||||| || |||| ||| | |||||||||| | Sbjct 7610544 ATCGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGAC 7610485 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA 52745 |||| || ||||||||||||| || || || || || | || |||||| | || | Sbjct 7610484 CTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCATGGCGCTCGG-CTGCAA 7610426 Query 52746 -AAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCA 52803 ||| | ||||| |||| || || || || | ||| | ||| || || |||||| Sbjct 7610425 GAAGATGTACAACG-TCGCCAACCCCTTCGACTGGATGGAGCTCATATCCCTGCAGGGCA 7610367 Query 52804 AGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 |||||||||| ||||||||||| |||||||| || Sbjct 7610366 AGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 7610333 Score = 140 bits (154), Expect = 3e-28 Identities = 349/515 (68%), Gaps = 20/515 (4%) Strand=Plus/Plus Query 52328 GCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGAC-ACCGCCA 52386 |||||||| ||||| ||| | ||||| ||| |||||||| ||| | | ||| Sbjct 1267196 GCCGTGCGC-CGCAA---GGCCGACTGGGCCATGCGATGGATCGACGGCGGCGAGCGCTT 1267251 Query 52387 CGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCT 52446 ||| |||||| | || ||||||||| |||||||| | || || || || | Sbjct 1267252 CGC----CGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGTTCAT 1267307 Query 52447 TTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACG 52506 | ||||||||| | | || | | || | ||||| ||||| || ||| ||||| Sbjct 1267308 TCTGCGCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCCTCACCTTCTCCAACG 1267367 Query 52507 AGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGC 52566 || | || || |||||||| || || ||| ||||| || |||||| |||| ||| | Sbjct 1267368 AGCTCATCTCCCGCGACGAGGGTCTCCACTGCGACTTCGCCTGCCTCCTCTAC--GAC-C 1267424 Query 52567 GCGTGACCGAAAAATTGGATTCG-GACACGA-TCCTGAGCATGTTCAAGGAGGCGGTGGC 52624 | | || || | || || | |||| ||| | || || || || |||| Sbjct 1267425 TCCTCCGCGGCAAGCTCGA--CGAGTCACGCGTCCAGGAGATCGTCGCCGACGCCGTGGA 1267482 Query 52625 TATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCA 52684 ||||| | |||||| | | |||||| || |||| ||| | || ||||||| | Sbjct 1267483 CATCGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGGATGAACGGCGA 1267542 Query 52685 GTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCC 52744 | |||| || ||||||||||||| || || || || ||| | || ||||||| || Sbjct 1267543 GCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTCGGGT-GCA 1267601 Query 52745 A-AAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGC 52802 | ||| | ||||| |||| || ||||| || | ||| | ||| || || ||||| Sbjct 1267602 AGAAGATGTACAACG-TCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGC 1267660 Query 52803 AAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||||||||| ||||||||||| |||||||| || Sbjct 1267661 AAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 1267695 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| || || || ||||| || || || || | Sbjct 25465214 GACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCG 25465155 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| |||||||| || || || || ||||| ||| || || | | Sbjct 25465154 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 25465095 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | |||||| ||||| | || | || || || || || || || Sbjct 25465094 TTG-TCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTT 25465036 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 25465035 CACAAAGATCTGCAT 25465021 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || || || |||| Sbjct 25465898 GACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCG 25465839 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| |||||||| || || || || ||||| ||| || || | | Sbjct 25465838 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 25465779 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||| | || | || || |||||||| || || Sbjct 25465778 TTG-TCGATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCAGTCAGGGTCTT 25465720 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 25465719 GACGAAGATCTGCAT 25465705 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||| || || || || | Sbjct 25466126 GACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCG 25466067 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 25466066 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 25466007 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| |||||| ||||| | || | || || |||||||| || || Sbjct 25466006 TTGTCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTC 25465947 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 25465946 ACGAAGATCTGCAT 25465933 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || ||||| || || || |||| Sbjct 25465442 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCG 25465383 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| ||||| || || || || || ||||| ||| || || | | Sbjct 25465382 AAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACA 25465323 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | |||||| ||||| | || | || || ||||||| || || Sbjct 25465322 TTG-TCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTT 25465264 Query 138600 TACAAAAATCTGCATGGCT 138618 || || ||||||||| || Sbjct 25465263 GACGAAGATCTGCATGCCT 25465245 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || |||||||||||| | || || |||||| || || || |||| Sbjct 25465670 GATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCG 25465611 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 25465610 AAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACG 25465551 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||||| || | || || || ||||| || || Sbjct 25465550 TTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTG 25465491 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 25465490 ACGAAGATCTGCAT 25465477 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| || || || ||||| || || || |||| Sbjct 25466354 GACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCGGCG 25466295 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || ||||| || ||||| ||| || || | Sbjct 25466294 AAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTCACG 25466235 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||| | ||||| ||||| | ||| | || || || ||||| || || Sbjct 25466234 TTGTCGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGTCTTG 25466175 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 25466174 ACGAAGATCTGCAT 25466161 >seq5 Length=26652778 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || |||| Sbjct 3217357 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 3217298 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || ||||| ||||| ||| || || | Sbjct 3217297 AAGATGAGGCGCTGCTGGTCCGGGGGGATCCCTTCCTTGTCCTGGATCTTGGCCTTCACG 3217238 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | || || || ||||| || || Sbjct 3217237 TTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTC 3217178 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 3217177 ACGAAGATCTGCAT 3217164 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | ||||| || || || || || |||| Sbjct 21800420 GACTCCTTCTGAATGTTGTAGTCGGCGAGGGTACGGCCATCTTCCAGCTGCTTGCCGGCG 21800361 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || ||||| ||||| || || |||||||| ||||| ||| || || | | Sbjct 21800360 AAGATCAGGCGCTGCTGGTCTGGGGGAATACCTTCCTTGTCCTGGATCTTAGCCTTCACA 21800301 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| |||| ||| ||||| | || | || || ||||| ||||| || Sbjct 21800300 TTG-TCGATGGTATCGGAGCTCTCAACCTCCAGAGTAATGGTCTTGCCAGTAAGAGTCTT 21800242 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 21800241 GACGAAGATCTGCAT 21800227 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||||||||| | || ||| || || || || || || | Sbjct 21799508 GATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCAAGCTGCTTGCCAGCG 21799449 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| |||||||| |||||||| || || || || ||||| ||| || |||| | Sbjct 21799448 AAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTTACA 21799389 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| || | ||||| ||||| | || | || || ||||| ||||| || Sbjct 21799388 TTG-TCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTCTT 21799330 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 21799329 CACAAAGATCTGCAT 21799315 >seq2 Length=33962743 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || ||||||||||| | || | |||||| || || || |||| Sbjct 3067632 TTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGG 3067691 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| |||||||| |||||||| || || || || ||||| ||| || || | Sbjct 3067692 CAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGA 3067751 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | |||||| | || |||||||||| || | || || || ||||| || | Sbjct 3067752 CGTTGTCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTGTCT 3067811 Query 138599 TTACAAAAATCTGCATG 138615 | ||||| ||||||||| Sbjct 3067812 TGACAAAGATCTGCATG 3067828 Score = 86.0 bits (94), Expect = 6e-12 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||||||||| | || | || | ||||| || || || || | Sbjct 3067406 GACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCA-TCCTCCAGCTGCTTGCCAGC 3067464 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA- 138538 | |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 3067465 AAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGAC 3067524 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||||| | | ||| || | ||||||||||||| || | || || || |||||||| | Sbjct 3067525 ATTGT-CGATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCT 3067583 Query 138599 TTACAAAAATCTGCATGGCT 138618 | || || || |||||| || Sbjct 3067584 TCACGAAGATTTGCATGCCT 3067603 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 ||||| || || || |||| |||| |||||||| ||||| || || || || |||||| Sbjct 3067983 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCTTTG 3068042 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||| || || | | || | |||||| | ||||||||||| | || | Sbjct 3068043 TCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATA 3068102 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || || || |||||||| || ||||| ||||||||| Sbjct 3068103 GTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATG 3068138 >seq1 Length=39866532 Score = 98.7 bits (108), Expect = 1e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || ||| |||||| || || || |||| Sbjct 11683526 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCG 11683585 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || || ||||| ||| || || | Sbjct 11683586 AAGATGAGCCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACG 11683645 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | ||||||||||| | ||| | ||| || || ||||| || || Sbjct 11683646 TTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTC 11683705 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 11683706 ACGAAGATCTGCAT 11683719 >seq7 Length=26200591 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | |||||||| |||||||||||||| Sbjct 10980357 CCACCACGGAGACGGAGGACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 10980416 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | |||||||| || || |||| |||| || ||||| ||||| || || Sbjct 10980417 AGGGTGCATCCTTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGTGGA 10980476 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || || || ||| || || | ||||| | | |||||||| |||||||| Sbjct 10980477 ATGCCCTCCTTATCTTGGATCTTCGCCTTCACATTGT-CGATGGTGTCGGAGGACTCCAC 10980535 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | | || || |||||||| || ||||| |||||||| Sbjct 10980536 CTCAAGGGTGATGGACTTGCCGGTCAGAGTCTTCACAAAGATCTGCAT 10980583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496238715876960