Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6 192 6e-44 seq5 134 1e-26 seq2 129 6e-25 seq1 107 2e-18 seq4 98.7 9e-16 seq7 95.1 1e-14 >seq6 Length=27870862 Score = 192 bits (212), Expect = 6e-44 Identities = 350/505 (69%), Gaps = 8/505 (2%) Strand=Plus/Minus Query 47075 CGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACTCTGGC 47134 ||||||| | |||||||| ||||||||| | || || || | | || | || Sbjct 7610830 CGTGCGCCGCAAGGCCGACTGGGCCATGCGCTGGATCGACGGCGGCGAG--CGCT-TCGC 7610774 Query 47135 CGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGG 47193 ||| || | |||| |||||| ||||||||| |||||||||||||| ||| |||| Sbjct 7610773 CGAGCGCCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCTCGGGCTCCTTCTGCGC 7610714 Query 47194 CGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAA 47253 | || || | | || | || | ||||| |||||||| || ||||||||| | Sbjct 7610713 C-ATCTTCTGGCTCAAGAAGCGGGGGCTCATGCCGGGCCTCACCTTCTCCAACGAGCTCA 7610655 Query 47254 TCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTACAACACTAGAGTCG 47313 |||| | ||||| ||||||||| | |||| ||||| ||| |||| || || || Sbjct 7610654 TCTCCCGCGACGAGGGCCTGCACTGCGACTTCGCCTGCCTCCTCTACGAC-CTCC--TCC 7610598 Query 47314 ATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGA 47373 ||| | |||| | | |||| |||| || | ||||| ||||||| ||| |||| Sbjct 7610597 GCGGCAAGCTCGACGAGGCGCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACATCGAGA 7610538 Query 47374 TGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGA 47433 |||||| || ||| || || |||| | | || || ||||||| || | |||| Sbjct 7610537 GGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGCATGAACGGCGACCTCATGA 7610478 Query 47434 GAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTT 47493 | |||||||||| || |||||||||||||| ||| | ||| | ||||| | Sbjct 7610477 GCCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCATGGCGCTCGGCTGCAAGAAGATGT 7610418 Query 47494 ACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACT 47553 || || || || || ||||| | ||| | ||| || || ||||||||||||||| Sbjct 7610417 ACAACGTCGCCAACCCCTTCGACTGGATGGAGCTCATATCCCTGCAGGGCAAGACCAACT 7610358 Query 47554 TTTTCGAGAAGCGCGTCGGCGAATA 47578 | |||||||||||||||||||| || Sbjct 7610357 TCTTCGAGAAGCGCGTCGGCGACTA 7610333 Score = 176 bits (194), Expect = 4e-39 Identities = 356/521 (68%), Gaps = 8/521 (2%) Strand=Plus/Plus Query 47059 TCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACG 47118 |||| | | | ||| ||||||| | |||||||| ||||||||| | || || || Sbjct 1267182 TCGACACCGTCCCCGCCGTGCGCCGCAAGGCCGACTGGGCCATGCGATGGATCGACGGCG 1267241 Query 47119 AAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCT 47178 | | || | ||||| || | |||| |||||| ||||||||| ||||||||| Sbjct 1267242 GCGAG--CGCT-TCGCCGAGCGGCTCGTCGCCTTCGCCTGCGTCGAGGGGATCTTCTTCT 1267298 Query 47179 CGGGCAGCTT-TGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACG 47237 |||| || |||| | || || | | || | ||| | ||||| |||||||| Sbjct 1267299 CGGGTTCATTCTGCGCC-ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCCTCACC 1267357 Query 47238 TTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTAC 47297 || ||||||||| ||||| | ||||| || || ||| | |||| ||||| ||| | Sbjct 1267358 TTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTCCACTGCGACTTCGCCTGCCTCCTC 1267417 Query 47298 TACAACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAA 47357 ||| || || || ||| | |||| | | |||| || || | ||||| Sbjct 1267418 TACGAC-CTCC--TCCGCGGCAAGCTCGACGAGTCACGCGTCCAGGAGATCGTCGCCGAC 1267474 Query 47358 GCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATG 47417 ||||| | ||| |||| |||||| || ||| || || |||| | | || || ||| Sbjct 1267475 GCCGTGGACATCGAGAGGGAGTTCGTCTGCGACGCGCTCCCCGTCGCGCTCGTCGGGATG 1267534 Query 47418 AACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTA 47477 |||| ||| | ||||| |||||||||| || ||||||||||| |||||| | ||| Sbjct 1267535 AACGGCGAGCTCATGAGCCAGTACATCGAGTTCGTCGCCGACCGGCTGCTCATGGCGCTC 1267594 Query 47478 AAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTC 47537 || ||||| ||| || || || || ||||| | ||| | ||| || || Sbjct 1267595 GGGTGCAAGAAGATGTACAACGTCGCCAACCCGTTCGACTGGATGGAGCTCATCTCCCTG 1267654 Query 47538 GAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 |||||||||||||||| |||||||||||||||||||| || Sbjct 1267655 CAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 1267695 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || ||||| ||| ||| ||||| ||| || ||||| || ||| Sbjct 25465217 GTAGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCAAGCTGCTTGCCA 25465158 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 25465157 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 25465098 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | |||||| || | ||| | || |||||||| || || Sbjct 25465097 ACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 25465038 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 25465037 TTCACAAAGATCTGCAT 25465021 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| ||| | | ||||| || || ||||| || || Sbjct 25465673 GTGGATTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCG 25465614 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || ||| Sbjct 25465613 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 25465554 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||||||| |||||| |||| ||| | || ||||||||||| || Sbjct 25465553 ACGTTGT-CGATCGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGGGT 25465495 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 25465494 CTTGACGAAGATCTGCAT 25465477 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || |||||||| | Sbjct 25466615 CCACCACGGAGGCGGAGCACCAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCCGCA 25466556 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| |||||| |||||||| || || || Sbjct 25466555 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 25466496 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| ||| ||| | |||| || | ||||| | ||| || Sbjct 25466495 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCAATAGTGTCGGACGACTCAAC 25466437 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| ||||| || || || || |||||||| Sbjct 25466436 CTCAAGGGTAATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 25466389 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || ||| ||||| ||| || ||||| || || Sbjct 25466357 GTGGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTGCGGCCATCCTCCAGCTGCTTGCCG 25466298 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 25466297 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTC 25466238 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| ||||||| |||||| || | || | || ||||||||||| || Sbjct 25466237 ACGTTGT-CGATCGTGTCCGAGGACTCGACCTCAAGCGTGATGGTCTTGCCGGTCAGGGT 25466179 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 25466178 CTTGACGAAGATCTGCAT 25466161 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | ||||| ||| || ||||| || || Sbjct 25465445 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGCTGCTTGCCG 25465386 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 25465385 GCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 25465326 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | |||||| || | ||| | || ||||| |||| || Sbjct 25465325 ACATTGTCAATGGTGTCAGACGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 25465266 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || ||||||||| || Sbjct 25465265 TTGACGAAGATCTGCATGCCT 25465245 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | | ||||| || || ||||| || || Sbjct 25465901 GTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCG 25465842 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || ||| Sbjct 25465841 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 25465782 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||||| |||||| || | || | || ||||| ||||| || Sbjct 25465781 ACATTGTCGATCGTGTCCGAGGACTCGACCTCAAGTGTGATGGTCTTGCCAGTCAGGGTC 25465722 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 25465721 TTGACGAAGATCTGCAT 25465705 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | | ||||| || || ||||| || ||| Sbjct 25466129 GTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCCAGCTGCTTGCCA 25466070 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || ||| Sbjct 25466069 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTC 25466010 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||||| | ||| || || | ||| | || ||||| ||||| || Sbjct 25466009 ACGTTG-TCAATAGTGTCGGACGACTCAACCTCAAGGGTAATGGTCTTGCCAGTCAGGGT 25465951 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 25465950 CTTCACGAAGATCTGCAT 25465933 >seq5 Length=26652778 Score = 134 bits (148), Expect = 1e-26 Identities = 158/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| |||| |||||||| || ||||| ||||| ||| | | ||||| ||| || Sbjct 21800208 CACCAAGTGTAGGGTAGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTGCGTCCATCCTC 21800149 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || |||||| |||| | || |||||| || || || ||||||||||| ||| Sbjct 21800148 CAGCTGCTTACCAGCGAAGATGAGTCTCTGCTGGTCCGGGGGGATGCCCTCCTTATCCTG 21800089 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| ||| ||| | ||||| | | |||||| | ||||| || || | ||| | || | Sbjct 21800088 GATCTTCGCCTTCACGTTGT-CAATGGTGTCTGAGCTCTCAACCTCCAGGGTAATAGTCT 21800030 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || ||||| || || ||||||||||| Sbjct 21800029 TGCCAGTGAGAGTCTTGACGAAAATCTGCAT 21799999 Score = 111 bits (122), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | || ||||| || || || |||||||| | Sbjct 7980576 CCACCGCGGAGACGGAGCACCAGGTGCAAGGTGGACTCCTTCTGGATGTTGTAATCTGCT 7980635 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || ||||| |||||| ||||||||||| || || Sbjct 7980636 AAGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGATCCGGGGGA 7980695 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGC--TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064 |||| |||||||||| ||| | | ||| || |||| || | ||||| | ||| | Sbjct 7980696 ATGCTCTCCTTGTCC-TGAATCTTTGCTTTTACGTTG-TCAATTGTGTCTGACGACTCAA 7980753 Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || | ||| | ||||||||||||| || || ||||| || ||||| Sbjct 7980754 CCTCCAGGGTAATGGTTTTGCCGGTCAATGTCTTGACAAAGATTTGCAT 7980802 Score = 105 bits (116), Expect = 6e-18 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || |||||||| || ||| | ||| || || ||||| || || Sbjct 7980834 GTAGACTCCTTGTGGATATTGTAGTCAGCCAGGGCGCGTCCGTCCTCGAGCTGCTTGCCG 7980893 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| || |||||||| || | || ||||||||||||||| || ||| ||| Sbjct 7980894 GCGAAGATGAAGCGCTGCTGGTCCCGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTC 7980953 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| || || | | |||||| || | || | || || |||||||| || Sbjct 7980954 ACATTGTCGATTGTATCAGAAGACTCGACCTCAAGCGTAATGGTCTTTCCGGTCAGGGTC 7981013 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||||||||||||| || Sbjct 7981014 TTGACAAAAATCTGCATGCCT 7981034 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || || || || ||||| || | | |||||| ||| || ||||| || ||| Sbjct 21799511 GTGGATTCCTTCTGGATGTTGTAGTCAGCAAGCGTGCGCCCATCTTCAAGCTGCTTGCCA 21799452 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 21799451 GCGAAGATGAGACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTT 21799392 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | ||| |||| ||| || || | ||| | || ||||| || ||||| Sbjct 21799391 ACATTGTCAATGGTATCCGAGGACTCAACCTCAAGGGTTATGGTCTTGCCAGTGAGAGTC 21799332 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 21799331 TTCACAAAGATCTGCAT 21799315 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | | ||| || ||||| || ||| Sbjct 21799739 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTACCATCCTCGAGCTGCTTGCCA 21799680 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||||| |||||||| || || || || |||||||||||| ||| || ||| Sbjct 21799679 GCAAAGATCAGACGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTTGCCTTA 21799620 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | || || | | ||| || || | ||| | || ||||| |||| || Sbjct 21799619 ACGTTG-TCAATAGTATCAGAAGACTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGT 21799561 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || ||||| || |||||| || Sbjct 21799560 CTTGACAAAGATTTGCATGCCT 21799539 >seq2 Length=33962743 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | |||||||| || || || ||||| ||| | Sbjct 3067145 CCACCACGGAGACGAAGCACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCA 3067204 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || || ||| |||| | |||||||| || || || Sbjct 3067205 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGG 3067264 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| |||| |||||||| ||||| || Sbjct 3067265 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTG-TCGATGGTGTCCGAGCTCTCAAC 3067323 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| || || || || ||||| |||||||| Sbjct 3067324 CTCCAGGGTGATGGTCTTGCCTGTGAGGGTCTTGACAAAGATCTGCAT 3067371 Score = 107 bits (118), Expect = 2e-18 Identities = 120/158 (76%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || || ||| |||| | |||||||| || || || |||||||| || Sbjct 3067982 ATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCTTT 3068041 Query 127018 GTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 |||| ||| || ||||| ||||| ||| |||||| | | ||| || || | ||| | Sbjct 3068042 GTCCTGGATCTTGGCCTTGACGTTGT-CGATGGTGTCAGAAGACTCCACCTCAAGGGTGA 3068100 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||||||||||||| || ||||| ||||||||| Sbjct 3068101 TAGTCTTGCCGGTCAGAGTCTTGACAAAGATCTGCATG 3068138 Score = 102 bits (112), Expect = 8e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | ||| || ||||| || ||| Sbjct 3067403 GTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 3067462 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || ||||||||||||||| ||| || |||| Sbjct 3067463 GCAAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 3067522 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | | ||| || |||| ||| | || |||||||||||||| Sbjct 3067523 ACATTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTC 3067582 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || || |||||| || Sbjct 3067583 TTCACGAAGATTTGCATGCCT 3067603 Score = 102 bits (112), Expect = 8e-17 Identities = 144/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || || || ||||| || | | || | || || ||||| || || Sbjct 3067630 CGTTGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCC 3067689 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 || |||| | |||||||| || || || ||||||||||||||| ||| || ||| Sbjct 3067690 GGCAAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTT 3067749 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| |||||| | | || || |||| ||| | || ||||||||||| | Sbjct 3067750 GACGTTG-TCGATGGTGTCAGAAGATTCCACCTCGAGGGTGATGGTCTTGCCGGTCAGTG 3067808 Query 127095 TTTTTACAAAAATCTGCATG 127114 | || ||||| ||||||||| Sbjct 3067809 TCTTGACAAAGATCTGCATG 3067828 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || || || ||||| ||| | Sbjct 3066917 CCACCACGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 3066976 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || ||||| || |||||| |||||| |||||||| || || || Sbjct 3066977 AGGGTGCGTCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCTGGGGGA 3067036 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| || ||| | | || | |||||| | ||||| || Sbjct 3067037 ATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTATCAATGGTGTCGGAGCTCTCAACC 3067096 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || |||| || || || || |||||||| Sbjct 3067097 TCCAAAGTGATGGTCTTCCCAGTCAAGGTCTTCACGAAGATCTGCAT 3067143 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| || | | || | ||| || ||||| || ||| Sbjct 3068169 GTCGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTCCTGCCATCCTCCAGCTGCTTGCCA 3068228 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||| || ||| || |||| Sbjct 3068229 GCGAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTATCTTGGATCTTAGCCTTG 3068288 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || |||| ||| | || |||||||||| || Sbjct 3068289 ACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAATGTC 3068348 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 3068349 TTCACAAAGATCTGCAT 3068365 >seq1 Length=39866532 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || || ||||| | || | ||||| || | || ||||| || || || ||||| ||| Sbjct 11683490 GCGCCGCCGCGGAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCG 11683549 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | | ||||| || || ||||| || || ||| |||| | |||||||| ||||| Sbjct 11683550 GCGAGGGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCGGGC 11683609 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || |||||||||||| ||| ||| ||| | |||| |||| |||||||| ||| Sbjct 11683610 GGGATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTG-TCGATGGTGTCCGAGGACTC 11683668 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | || | ||| || || ||||| || || || || |||||||| Sbjct 11683669 CACCTCCAGCGTGATCGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 11683719 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | || | ||||| || | ||| ||||| || || || ||||| ||| || Sbjct 23562502 CCGCCGCGGAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCC 23562443 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 23562442 AGCGTGCGCCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCGGG 23562383 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| | ||| ||||| | | || ||||| | ||||| || Sbjct 23562382 ATCCCCTCCTTGTCCTGCACCTTCGCCTTGACGTTCTGGATCGTGTCGCTGCTCTCCACC 23562323 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || || || ||||| || || || || |||||||| Sbjct 23562322 TCCAGCGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCAT 23562276 >seq4 Length=30521686 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| | | |||||| ||| || ||||| || ||| Sbjct 27324842 GTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTGCGACCATCCTCAAGCTGCTTGCCA 27324783 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 27324782 GCGAAGATGAGGCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTGGCCTTC 27324723 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | ||| || || | ||| | || |||||||| || || Sbjct 27324722 ACATTGTCGATCGTGTCAGACGACTCAACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTC 27324663 Query 127097 TTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 27324662 TTCACGAAGATCTGCAT 27324646 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || ||||| || || || || || || | | ||||| || || Sbjct 27324626 ACCAAGTGCAAGGTGGACTCCTTCTGGATGTTATAGTCAGCAAGGGTGCGGCCGTCCTCA 27324567 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| || |||||| |||| | |||||||| || || || || |||||||||||| | Sbjct 27324566 AGCTGCTTGCCAGCGAAGATGAGCCGCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGG 27324507 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | |||| ||||| | ||| || || | ||| | ||| ||| Sbjct 27324506 ATCTTGGCCTTCACATTGTCGATCGTGTCAGAGGACTCAACCTCCAAGGTGATCGTCTTG 27324447 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || ||||| |||||||| Sbjct 27324446 CCAGTAAGGGTCTTCACAAAGATCTGCAT 27324418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || || ||||| || ||||| || | | ||||| ||| || ||||| || ||| Sbjct 27324386 GTGGATTCCTTTTGGATGTTGTAGTCTGCAAGGGTGCGGCCATCCTCGAGCTGCTTCCCA 27324327 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | |||||||| || || || || |||||||||||| ||| || ||| Sbjct 27324326 GCAAAGATGAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTC 27324267 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| | |||||| || | ||| | || |||||||| || || Sbjct 27324266 ACATTATCGATCGTGTCGGAGGACTCGACCTCCAGGGTAATGGTCTTGCCGGTGAGGGTC 27324207 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || || || || |||||| || Sbjct 27324206 TTCACGAATATTTGCATGCCT 27324186 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || || || ||| | | ||||| ||| || ||||| || || Sbjct 27325070 GTGGACTCCTTCTGGATGTTATAGTCGGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 27325011 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || ||||| ||||||||||| ||| ||| || ||| Sbjct 27325010 GCGAAGATGAGGCGCTGCTGGTCTGGAGGGATGCCCTCCTTATCCTGGATCTTGGCCTTC 27324951 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| |||| |||||| | || || || | || | || ||||| || || || Sbjct 27324950 ACGTTG-TCGATGGTGTCAGAGGATTCAACCTCCAGAGTGATGGTCTTGCCAGTGAGGGT 27324892 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 27324891 CTTCACGAAGATCTGCAT 27324874 >seq7 Length=26200591 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| || | | |||| || || ||||| || || Sbjct 10980387 GTGGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTGCATCCTTCCTCGAGCTGCTTGCCG 10980446 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||| || ||| ||| ||| Sbjct 10980447 GCGAAGATGAGGCGCTGCTGGTCTGGTGGAATGCCCTCCTTATCTTGGATCTTCGCCTTC 10980506 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | ||| || || | ||| | | |||||||||||||| Sbjct 10980507 ACATTGTCGATGGTGTCGGAGGACTCCACCTCAAGGGTGATGGACTTGCCGGTCAGAGTC 10980566 Query 127097 TTTACAAAAATCTGCAT 127113 || ||||| |||||||| Sbjct 10980567 TTCACAAAGATCTGCAT 10980583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475478106724320