Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq8 609 3e-169 seq2 491 6e-134 seq10 405 6e-108 seq4 188 9e-43 seq12 167 3e-36 seq6 98.7 1e-15 >seq8 Length=25958679 Score = 609 bits (674), Expect = 3e-169 Identities = 731/991 (74%), Gaps = 27/991 (3%) Strand=Plus/Minus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 20128779 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 20128720 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 | ||||||||||| | || ||||| || || | || |||||||| | ||||| | Sbjct 20128719 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 20128660 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || |||||||| ||||| ||||| || ||||| ||||| || |||| ||| | |||||| Sbjct 20128659 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 20128600 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 |||||| || || || || ||||| ||| | | ||||||||| | |||||| |||||||| Sbjct 20128599 GAACCAAATCCCTACTACAGGCCAAGCTACCAAGAAGAAGTGTAACGAACGAGAGTTGTT 20128540 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 || ||| ||||||||||| | || ||||| || || ||||| || || || || || Sbjct 20128539 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 20128480 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 |||||||| |||||||| || | ||||| | || || || ||||||||||| Sbjct 20128479 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 20128420 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | | || | ||||||||| | ||||||||||| |||||||| || ||||| || || Sbjct 20128419 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 20128360 Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013 |||||||| || || | |||||| || || ||||| |||||||| |||||||| ||||| Sbjct 20128359 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAA 20128300 Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073 |||| ||| ||||||| |||||||| || || | ||||||| | ||||||||| || Sbjct 20128299 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 20128240 Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133 |||||| | ||| || | ||| ||||||| || || ||||| ||||| || ||||| Sbjct 20128239 TTGACCAATAGGGTAATTCAAGAAAACAGCAGTAGCAGCCGCAACAGGAGCTGAATATGC 20128180 Query 8134 TACACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTA 8193 ||| ||||| ||||||||||| |||||| || ||||||||||||||||||| || Sbjct 20128179 AACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCA--TA 20128122 Query 8194 TGCATAG--ATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAG 8251 || || | ||| | | |||||| | | || || | ||||||| || ||||| Sbjct 20128121 TGACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTAT 20128062 Query 8252 AGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTA 8311 | ||||||||||| ||| || |||||||| || || || ||||| | || || || | Sbjct 20128061 AACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCA 20128002 Query 8312 GAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACG 8371 |||| ||||| || ||||||||||| || ||||| || || | | |||||| || Sbjct 20128001 GAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAAAACCAGAAAC- 20127943 Query 8372 GGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACA 8430 ||| ||| |||| |||| || ||| |||| || || ||| Sbjct 20127942 ------------------ATGCTCACGAGAGGGGCAGTGATGAAGGCGATAATAAATACA 20127901 Query 8431 AATAGCAGCAG-CGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGAC 8489 || || || | ||| || ||||| || |||| ||||||||||| |||| || |||| Sbjct 20127900 AA-AGTTGCGGTCGATAAG-GTAGGGATTATCAAAACACCGAACCATCCGATGTAAAGAC 20127843 Query 8490 GATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 | || | |||| |||| |||||| ||||| Sbjct 20127842 GGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 20127812 >seq2 Length=33962743 Score = 491 bits (544), Expect = 6e-134 Identities = 721/1015 (71%), Gaps = 4/1015 (0%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| || || ||||| |||| || |||||||| || |||||| Sbjct 13365825 AGAGCGTTTCCACGTGGTTGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCTGATCC 13365884 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||||| ||||| | ||| | || || || || || ||||| ||||| ||| Sbjct 13365885 TGAGCTGCCATCCACGCACGAATACCCTTGTTTAAAAGAATATTTTTGGTGTAGAAAGTC 13365944 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 || || || ||||| |||||||| | ||| || || ||||| |||||||| || ||| Sbjct 13365945 TCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAAGTAGG 13366004 Query 6443 TTAAGTGCAAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAAC 6502 || || || || || | | ||||| | |||| | ||| | || || ||||| Sbjct 13366005 TTCAGAGCCAGGCCGACTACGCCAATAGCACTCATCCATAAACCGGTGACCGGTACAAAT 13366064 Query 6503 AGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAG 6562 |||||||||||||||| |||||| |||||| || || | ||||||||| || ||||| Sbjct 13366065 AGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAA 13366124 Query 6563 AAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTG 6622 || |||||||| |||||||| ||||| || || || |||| || || | ||| | Sbjct 13366125 AAGCGATTAGCGGTGACCATTGAATAAGTGTCTTCAGCTTGAGTTGGGTTAAAAGTGCGA 13366184 Query 6623 AAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATA 6682 || ||||||| ||||| || ||||| | ||| || || || || || || |||||| Sbjct 13366185 AAGGTATTTGTACCATCACCGTCCTCAAATAGAGTGTTTTCCACGGTTGCCCCATGAATA 13366244 Query 6683 GCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGC 6742 || || |||| || | ||||| | || || || |||||||||||||| ||||| | | Sbjct 13366245 GCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAAC 13366304 Query 6743 GTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAAC 6802 ||||| || || || || || | |||||| | ||| || ||||||||||| || ||||| Sbjct 13366305 GTCCAATTATGAAATCCTTGGAAGAAGAGGATGAATCGAAATATCGCTGCTACGCCAAAA 13366364 Query 6803 GACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAG 6862 ||||||||||||||||| ||| || || || ||||| || | || || || ||||| Sbjct 13366365 CTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGGATAAATCGGGAATACGGAAACAAAA 13366424 Query 6863 ACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGC 6921 |||||||| || ||||| || | |||||||| || || | | | || ||| || || Sbjct 13366425 ACAGCAATTGGGCCAGAGAATGAAATTGCATTATAAGG-CCACAATTGAACAGATCGAGC 13366483 Query 6922 GATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAA 6981 | ||||| || || | |||||||||||| || ||||| || || ||||| || ||||| Sbjct 13366484 AAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCAACAAA 13366543 Query 6982 AGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCCA 7041 || |||||| || || | ||| ||| || ||||| || || ||||| || ||||| Sbjct 13366544 AGTCCATAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGTGCTTCCGGGCCCCA 13366603 Query 7042 TAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGAA 7101 ||| || | | || ||| | | | | ||||| | || || || | || | ||| Sbjct 13366604 TAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGGGGGGAAACTGCTACGGTTAAGAA 13366663 Query 7102 ATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAGT 7161 ||| || || || | ||| ||| || | || || || ||||| || || ||||| Sbjct 13366664 ATTGCAACCTTCCAAATAGGAACTCGCCAATCCATGGGTATACCAAGAAGTTACAAAAGT 13366723 Query 7162 TGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTGA 7221 ||| || || | |||||| || | || | |||||| ||| || || | || || || Sbjct 13366724 TGTCCCTGTAAACCAACCTCCTAAAGCGAAATAAGCACAAGGAAAAAGCAATAGGCCAGA 13366783 Query 7222 CCAACCAACAAAAACGAACCTATCAC-GCTTAAGCCAGTCATCGAGTACATCAAA 7275 ||| || |||||||| || | || | | ||| |||||| || | | |||||| Sbjct 13366784 CCATCCTACAAAAACAAAACGGTCCCTTCGTAA-CCAGTCGTCCATAATATCAAA 13366837 Score = 181 bits (200), Expect = 1e-40 Identities = 232/320 (73%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 6416 TGTGAAACAAAGTCATAAGCTCTAAGGTTAAGTGCAAGACCAATAATACCAATGCTAGAG 6475 || ||||| |||||||| || | ||||| || || || || | | ||||| | Sbjct 18365260 TGGGAAACGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCGACTACGCCAATAGCACTC 18365201 Query 6476 GTCCAAAGACCCATAACAGGAACAAACAGCATAAAGAAATGTAGCCAACGCTTATTGCTG 6535 |||| | ||| | || || ||||| |||||||||||||||| |||||| |||||| Sbjct 18365200 ATCCATAAACCGGTGACCGGTACAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAA 18365141 Query 6536 AAGGCGATACCAAAGATCTGAGACCAGAAACGATTAGCCGTGACCATCGAATAGGTCTCC 6595 || || | ||||||||| || ||||| || |||||||| |||||||| ||||| || || Sbjct 18365140 AAAGCAACACCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTCT 18365081 Query 6596 TCTTCTTGTGTAGGCTCAAACGCCTTGAAAGTATTTGATTGTTCACCATCTTCAAACAAA 6655 || |||| || || | ||| || ||| ||||||| ||||| || ||||| | | Sbjct 18365080 TCAGCTTGAGTTGGGTTAAAAGCGCGGAAGGTATTTGCACCATCACCGTCCTCAAATAGA 18365021 Query 6656 GTATTCTCTACAGTAGCACCGTGAATAGCACAGAGCAATGCTCCACCTAAGATACCTGCT 6715 || || || || || || || |||||||| || |||| || | ||||| | || || Sbjct 18365020 GTGTTTTCCACGGTTGCCCCATGAATAGCGCATAGCAGAGCCGCGCCTAATACTCCGGCA 18364961 Query 6716 ACACCCATCATATGAAACGG 6735 || |||||||||||||| || Sbjct 18364960 ACTCCCATCATATGAAATGG 18364941 Score = 123 bits (136), Expect = 3e-23 Identities = 129/168 (77%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 7555 GTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGACCAGCACGGTTGAGCACGTC 7614 || |||||||||||| |||||||| |||||||| ||||| |||||||||| | || Sbjct 14982186 GTGGTGAGCATTACGTTCGTGCATTACTTCCATAGCAAGATTTGCACGGTTGATGATATC 14982245 Query 7615 TGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGATGGACTGGTTGAAGTTGAAACC 7674 ||||| || | | || |||||||| | ||||| | || |||||||| ||||| || Sbjct 14982246 AGCCCAAGTATAAATAACGCGACCTTGGCTATCAACTACAGA-TGGTTGAAATTGAACCC 14982304 Query 7675 GTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGAACCAGAT 7722 || || ||||| ||||| || |||| ||| | |||||||||||| || Sbjct 14982305 ATTTAGATTGAAAGCCATAGTCCTAATACCTAAAGCAGTGAACCAAAT 14982352 >seq10 Length=20731201 Score = 405 bits (448), Expect = 6e-108 Identities = 451/604 (75%), Gaps = 10/604 (2%) Strand=Plus/Minus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| ||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| Sbjct 18976244 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 18976185 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 | ||||||||||| | || ||||| || || | ||| | ||||| | Sbjct 18976184 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAA----------TTGGCTATCAACTAC 18976135 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 | |||||||| ||||| ||||| || ||||| ||||| || |||| ||| | |||| | Sbjct 18976134 ATATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAAT 18976075 Query 7714 GAACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTT 7773 |||||| || || || || ||||| || || | ||||||||| | || || |||||||| Sbjct 18976074 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGATCGAGAGTTGTT 18976015 Query 7774 GAACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTA 7833 || ||| ||||||||||| | || ||||| || || ||||| || || || || || Sbjct 18976014 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 18975955 Query 7834 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTC 7893 |||||||| |||||||| || | ||||| | || || || ||||||||||| Sbjct 18975954 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 18975895 Query 7894 ACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAA 7953 | | || | ||||||||| | ||||||||||| ||||| || || ||||| || || Sbjct 18975894 CCCGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTAAATAGGGAACCGCCGAA 18975835 Query 7954 GACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 8013 |||||||| || || | |||||| || | ||||| |||||||| || ||||| ||||| Sbjct 18975834 TACACCAGCTACACCTAACATGTGAAATAGATGCATAAGGATGTTATGATCTGCCTGGAA 18975775 Query 8014 GACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACC 8073 |||| ||| ||||||| |||||||| || || | ||||||| | ||| ||||| || Sbjct 18975774 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAAAGAAACTTCC 18975715 Query 8074 TTGACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGC 8133 |||||| | ||| || | | ||| ||||||| || || ||||| ||||| || ||||| Sbjct 18975714 TTGACCAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 18975655 Query 8134 TACA 8137 ||| Sbjct 18975654 AACA 18975651 Score = 178 bits (196), Expect = 2e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 7883 TCAGTGGTTTCACGAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGA 7942 ||||||||||| | | || | ||||||||| | ||||||||||| |||||||| || Sbjct 9553451 TCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGG 9553510 Query 7943 GAACCACCAAAGACACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGC 8002 ||||| || || |||||||| || || | |||||| || || ||||| |||||||| ||| Sbjct 9553511 GAACCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGC 9553570 Query 8003 TCTGCTTGGAAGACAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCA 8062 ||||| ||||| |||| ||| ||||||| |||||||| || || | ||||||| | ||| Sbjct 9553571 TCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCA 9553630 Query 8063 GAGAAAGAACCTTGACCGAAAGGATA 8088 |||||| |||||||| | ||| || Sbjct 9553631 GAGAAACTTCCTTGACCAATAGGGTA 9553656 >seq4 Length=30521686 Score = 188 bits (208), Expect = 9e-43 Identities = 227/306 (74%), Gaps = 2/306 (1%) Strand=Plus/Plus Query 6698 CCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGAGCGTCCAGTTGTGGAAG 6757 || ||||| | || || || |||||||||||||| ||||| | |||||| || || || Sbjct 19658207 CCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAAT 19658266 Query 6758 CCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAAACGACGGCGCAAAGAAC 6817 || || | |||||| | ||| || ||||||||||| || ||||| ||||||||||||| Sbjct 19658267 CCTTGGAAGAAGAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAAC 19658326 Query 6818 CAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAAAGACAGCAATGGGACCA 6877 |||| ||| || || || ||||| || || || || || ||||| | ||| || || ||| Sbjct 19658327 CAACCGGATTGCCCCAGTGGATAAATCAGGAATACGGAAACAAAAATAGCGATTGGGCCA 19658386 Query 6878 GAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGA-CGTGCGATCTCAAACTGCCG 6936 || || | |||||||| || || || | | || ||| || | | ||||| || | Sbjct 19658387 GAGAATGAAATTGCATTATAAGGCCGCA-ATTGAACAGACCGAGTAAGTTCAAATTGACA 19658445 Query 6937 AAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAAAAGGCCATAGTCCCCC 6996 | |||||||||||| || ||||| || || ||||| || ||||||| ||| || || || Sbjct 19658446 TAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCAACAAAAGTCCACAGACCACC 19658505 Query 6997 AAGTTG 7002 | ||| Sbjct 19658506 TAATTG 19658511 Score = 143 bits (158), Expect = 3e-29 Identities = 166/221 (75%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 6783 ATATCGCTGCAACACCAAACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACA 6842 |||||||||| || ||||| ||||||||||||||||| ||| || || || ||||| | Sbjct 7261449 ATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGGATAAA 7261390 Query 6843 TGAGAAAGACAGACACAAAGACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGAC 6902 | || || || || ||||| ||||| || || ||||| || | |||||||| || || | Sbjct 7261389 TCAGGAATACGGAAACAAAAACAGCGATTGGGCCAGAGAATGAAATTGCATTATAAGGCC 7261330 Query 6903 GAATACCGACTAGA-CGTGCGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAG 6961 | | | || ||| || || | ||||| || || | |||||||||||| || ||||| Sbjct 7261329 GCA-ATTGAACAGACCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAA 7261271 Query 6962 GCTCCGTGGAGCGCCACAAAAGGCCATAGTCCCCCAAGTTG 7002 || || ||||| || ||||||| ||| || || || | ||| Sbjct 7261270 GCCCCATGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 7261230 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 8171 AGTTCCCACTCACGACCCATGTATGCATAGATACCGATCAGGAAGTGGAAGATAACGAGT 8230 |||||||||||||||||||| || | | ||| | | |||||| | | || || Sbjct 7243216 AGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGC 7243157 Query 8231 TGGAAAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAG 8290 | |||||||||| ||||| | ||||||||||| ||| || |||||||| || || || Sbjct 7243156 TCATAAGGACCACCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAA 7243097 Query 8291 AAGTGGAGACCAATAGCGTTAGAAGAAGGAA 8321 ||||| | || || || ||||| ||||| Sbjct 7243096 AAGTGCAATCCGATCGCCGCAGAAGTAGGAA 7243066 >seq12 Length=23561512 Score = 167 bits (184), Expect = 3e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 7534 AGCAGCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAG 7593 |||||| ||||| |||||||||||||||| |||||| ||||| || ||| |||| ||||| Sbjct 9700937 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGTATTACGTTCGTGTATTACTCCCATACCAAG 9700878 Query 7594 ACCAGCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACCTTGACCATCAATGAT 7653 | |||||| |||| | || ||||| || || | || |||||||| | ||||| | Sbjct 9700877 ATTAGCACGATTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 9700818 Query 7654 GGACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGT 7713 || | |||||| ||||| ||||| || ||||| ||||| || |||| ||| | |||||| Sbjct 9700817 AGATTAGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 9700758 Query 7714 GAACCAGATGCCAACAACTGGCCATGC 7740 |||||| || || || || ||||| || Sbjct 9700757 GAACCAAATCCCTACTACAGGCCAAGC 9700731 Score = 145 bits (160), Expect = 9e-30 Identities = 206/287 (72%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 8235 AAGGACCACCGTTGTAGAGCCACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGT 8294 ||||||| || ||||| | ||||||||||| ||| || |||||||| || | || |||| Sbjct 9700600 AAGGACCGCCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGAGTAAAAGT 9700541 Query 8295 GGAGACCAATAGCGTTAGAAGAAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACA 8354 | | || || || |||||| ||||| || | ||||||||| || ||||| || || | Sbjct 9700540 GCAATCCGATCGCAGTAGAAGTAGGAATAATGGTACCAGAGATAATATTGTTTCCGTAAA 9700481 Query 8355 TGAGCGAACCAGCGACGGGTTCACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGA 8414 | |||||| || | ||||| || || ||||| || | ||||| ||||||| || Sbjct 9700480 GTAAAAAACCAGAAACATGCTCACGAATACCATCAATATCTGCTGGAGGGGCAGCGATGA 9700421 Query 8415 AAGCGACGATGAA-ACAAATAGCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAAC 8473 | |||| || || ||| | || || | | | ||||| ||||||| ||||| ||| Sbjct 9700420 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAAC 9700362 Query 8474 CAACCGACATACAGACGATTGTTGGTGGAGGTTACCCAGTTACAGAA 8520 || || | || ||||| || | |||| |||| |||||| ||||| Sbjct 9700361 CATCCAATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 9700315 >seq6 Length=27870862 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 7676 TTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGAACCAGATGCCAACAACTGGC 7735 || || ||||| ||||| || |||| ||| | |||||||||||| || || || || ||| Sbjct 8615047 TTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAAATCCCTACTACAGGC 8615106 Query 7736 CATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGAAGCGTATTGGAAGATC 7795 || || || | ||||||||| | ||||| |||||||| || ||| ||||||||||| Sbjct 8615107 CAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAAACTAGCATATTGGAAGATT 8615166 Query 7796 AGACGACCAAAGTATCC 7812 | || || || || || Sbjct 8615167 AATCGGCCCAAATAACC 8615183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622095109093920