Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq2 545 3e-150 seq8 542 3e-149 seq10 367 2e-96 seq4 212 8e-50 seq12 149 8e-31 seq6 91.5 2e-13 seq1 87.8 2e-12 >seq2 Length=33962743 Score = 545 bits (604), Expect = 3e-150 Identities = 733/1015 (72%), Gaps = 4/1015 (0%) Strand=Plus/Minus Query 181424 TTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTGGA 181483 ||||| || | || |||||| | | | ||||| ||||| ||||| || |||||||| Sbjct 13366837 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 13366778 Query 181484 CTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTTTT 181543 ||| | |||||||| ||||||| | || | || || ||| | || || || |||||| Sbjct 13366777 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 13366718 Query 181544 GTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCCTT 181603 || || || ||||| ||||| ||||||||| |||||| | || ||| |||||| | Sbjct 13366717 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTA 13366658 Query 181604 ACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGT 181663 || | || || || | ||||| | | | | || ||| | | ||||| ||||| Sbjct 13366657 ACCGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGC 13366598 Query 181664 CCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTGTG 181723 || ||||| || || ||||| || ||| ||| | || || || ||| ||||||| Sbjct 13366597 CCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTT 13366538 Query 181724 GCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTCG- 181782 || ||||| || || || || || || ||||| ||| | | ||||||||||||||||| Sbjct 13366537 GCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGA 13366478 Query 181783 TCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCGT 181842 ||| || | | | || || ||||| ||| | || || || || |||||||| || || Sbjct 13366477 TCTGTTCA-ATTGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGT 13366419 Query 181843 CTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCGG 181902 || ||||| | || ||||| ||||| |||||| |||||||||||||||||||||| || Sbjct 13366418 TTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGG 13366359 Query 181903 TGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCAA 181962 || || ||||| || || ||| | |||||| |||| || ||||||||||||||| | || Sbjct 13366358 CGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAA 13366299 Query 181963 TCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTCA 182022 || || ||||||||||| ||||| || | | || | || | || | || ||||| Sbjct 13366298 CCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCA 13366239 Query 182023 CGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATAC-TTTCAAAG 182081 || | |||||||| || ||||| | | | |||||||| ||||||| |||| | Sbjct 13366238 TGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCA- 13366180 Query 182082 CATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGT 182141 | || | ||||||||| ||||| || ||||||||||| || || || ||||| |||| Sbjct 13366179 CTTTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 13366120 Query 182142 CTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTG 182201 | || ||||| ||| |||| ||| |||||| | ||||| |||||||||||||| |||| Sbjct 13366119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 13366060 Query 182202 TTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 182261 | || || | ||| | |||| ||| | || || | | || || ||||| ||||| | Sbjct 13366059 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 13366000 Query 182262 GTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGT 182321 ||| |||||||| || ||||| |||||| | ||| | ||||| || || || ||||| | Sbjct 13365999 TTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTT 13365940 Query 182322 TCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATC 182381 ||||||| || || ||||| || || | ||| | ||||| ||| | ||| | |||| Sbjct 13365939 TCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATC 13365880 Query 182382 AACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 | || ||||| || || | ||||||||||| || ||| | || ||||| || Sbjct 13365879 AGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT 13365825 Score = 194 bits (214), Expect = 2e-44 Identities = 236/322 (73%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 181962 ATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTC 182021 |||| || ||||||||||| ||||| || | | || | || | || | || |||| Sbjct 18364939 ATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 18364998 Query 182022 ACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCAAAG 182081 | || | |||||||| || ||||| | | | |||||||| |||||||| ||| | Sbjct 18364999 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCG 18365058 Query 182082 CATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCTGGT 182141 | || | ||||||||| |||||||| ||||||||||| || || || ||||| |||| Sbjct 18365059 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 18365118 Query 182142 CTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTG 182201 | || ||||| ||| |||| ||| |||||| | ||||| |||||||||||||| |||| Sbjct 18365119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 18365178 Query 182202 TTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 182261 | || || | ||| | |||| ||| | || || | | || || ||||| ||||| | Sbjct 18365179 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 18365238 Query 182262 GTGCTTATGACTTTGTATCCCA 182283 |||| |||||||| || ||||| Sbjct 18365239 GTGCCTATGACTTCGTTTCCCA 18365260 Score = 111 bits (122), Expect = 2e-19 Identities = 126/168 (75%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 180546 ATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 180605 || ||||||||||| | || | || || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 180606 AACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGGGCAGACGTACTCAAC 180665 ||||| || | ||||| | |||||||| || | | |||||||| || | ||||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 180666 CGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAAC 180713 || || ||| | ||||||||| |||||||| |||||||||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 Score = 109 bits (120), Expect = 7e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 182267 TATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGACGTTCTAC 182326 |||||||| || ||||| |||||| | ||| | ||||| || || || ||||| |||||| Sbjct 13367198 TATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTAC 13367257 Query 182327 ACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCGATCAACCA 182386 || || || ||||| || || || ||| | ||||| ||| | ||| | ||||| || Sbjct 13367258 ACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCT 13367317 Query 182387 CATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436 ||||| || || | ||||||||||| || |||| | || ||||| || Sbjct 13367318 CATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 13367367 >seq8 Length=25958679 Score = 542 bits (600), Expect = 3e-149 Identities = 722/1000 (72%), Gaps = 25/1000 (3%) Strand=Plus/Plus Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797 ||||| | ||||||| | ||| |||| ||| | ||||| || || |||| ||||| Sbjct 20127802 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTT 20127861 Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCAT 179857 ||| ||| |||| || || || | | | | |||||| | || || |||||||||| Sbjct 20127862 CGGTGTTTTGATAATCCCTACCTTATCGACCGCAACTTTTGTATTTATTATCGCCTTCAT 20127921 Query 179858 CGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTA 179917 | |||| |||| | ||||| | || |||||| | | || Sbjct 20127922 CACTGC---CCCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTA 20127962 Query 179918 TGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTT 179977 || ||||| || ||||||||||| || ||||| |||| || || || | ||||| Sbjct 20127963 CGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTT 20128022 Query 179978 CTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCA 180037 || || || |||||||| ||||| |||| |||||| | || || || ||||||| | Sbjct 20128023 TTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGA 20128082 Query 180038 ACTTGTCGTCTTCCACTTCCTGATTGGCAT--CTATGCCTACATGGGTCGTGAGTGGGAA 180095 || | || | |||||| | |||| | || || | | |||||||||||||||||| Sbjct 20128083 GCTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGTC-ATATGGGTCGTGAGTGGGAA 20128140 Query 180096 CTTTCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGC 180154 || || || |||||||||| || ||||| ||| || |||||||| ||||| || || Sbjct 20128141 CTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGC 20128199 Query 180155 TGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAAT 180214 || || ||||||| ||| | || ||| | |||||||| |||||||| | || Sbjct 20128200 GGCTGCTACTGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTAT 20128259 Query 180215 GCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACAT 180274 ||| | || || ||||| || ||||||| ||| |||| ||||| |||||||| ||||| Sbjct 20128260 GCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACAT 20128319 Query 180275 CCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTC 180334 ||| ||||| || || |||||| | || ||||| ||||| ||||||||||| || ||| Sbjct 20128320 CCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAG 20128379 Query 180335 CGCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTC 180394 || ||||| ||||| |||| |||||| || | | ||||||||||||| || || Sbjct 20128380 TGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATC 20128439 Query 180395 CCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACA 180454 || | ||||||| ||||||||||| |||||||| || || || || || || || Sbjct 20128440 TGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCA 20128499 Query 180455 TGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCA 180514 ||| || || || || | |||||||| ||||| || |||||||| ||||| | || Sbjct 20128500 TGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACA 20128559 Query 180515 CTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCAC 180574 ||||||| ||| ||| |||||||| || || || ||||||||||| | || | || || Sbjct 20128560 CTTCTTCTTGGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 20128619 Query 180575 CATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCG 180634 ||||| ||||| || ||||| ||||| |||||||| || | ||||| | |||||||| Sbjct 20128620 TATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCG 20128679 Query 180635 TGTGCTCAACACTTGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCA 180694 || | || |||||||| || | ||||||| ||| ||| ||||||||||| ||||| Sbjct 20128680 CGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCA 20128739 Query 180695 CGAGCGTAATGCTCACAACTTCCCACTTGACCTGGCAGCT 180734 ||| |||||||||||||||||||| || ||||| || ||| Sbjct 20128740 CGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq10 Length=20731201 Score = 367 bits (406), Expect = 2e-96 Identities = 442/603 (73%), Gaps = 10/603 (2%) Strand=Plus/Plus Query 180132 GTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGGT 180191 || |||||||| ||||| || || || || ||||||| ||| | | || ||| | ||| Sbjct 18975652 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGT 18975711 Query 180192 CAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCTTCAACTACATGCTT 180251 ||||| |||| ||| | ||||| | || || ||||| || ||||||| ||| || Sbjct 18975712 CAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATT 18975771 Query 180252 GTTTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGT 180311 || ||||| ||||| || |||||||| ||||| | || |||||| | || ||||| ||| Sbjct 18975772 GTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGGT 18975831 Query 180312 GTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGTTACCTCTTCACTGGTT 180371 || ||||||||||| || || || ||||| ||||| |||| |||||| || | Sbjct 18975832 GTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATC 18975891 Query 180372 CGTGAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAG 180431 | ||||||||||||| || || || | ||||||| ||||||||||| |||||| Sbjct 18975892 GGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAG 18975951 Query 180432 ACCTACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCG 180491 || || || || || || || ||||| || || || || | |||||||| ||||| Sbjct 18975952 ACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGT 18976011 Query 180492 TTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGG 180551 || |||||||| || || | ||||||||| |||| || |||||||| || || || ||| Sbjct 18976012 TTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGG 18976071 Query 180552 TTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACCAG 180611 |||| ||| | || | || || ||||| ||||| || ||||| ||||| |||||||| Sbjct 18976072 TTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAA 18976131 Query 180612 TCCATCATTGATGGTCAAGGTCGTGTGCTCAACACTTGGGCAGACGTACTCAACCGCGCT 180671 | | ||||| | ||| | || |||||||| || | ||||||| ||| Sbjct 18976132 TATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTGCT 18976181 Query 180672 GGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTGGCA 180731 ||| ||||||||||| |||||||| |||||||||||||||||||| || ||||| || Sbjct 18976182 AATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 18976241 Query 180732 GCT 180734 ||| Sbjct 18976242 GCT 18976244 Score = 150 bits (166), Expect = 2e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 180180 TATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCACCTTC 180239 || ||| | |||||||| |||||||| | ||||| | || || ||||| || ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 180240 AACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTG 180299 |||| ||| |||| ||||| |||||||| |||||||| ||||| || || |||||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 180300 GGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGTTACC 180359 || ||||| ||||| ||||||||||| || ||| || ||||| ||||| |||| ||| Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 180360 TCTTCACTGGTTCGTGAAACCACTGAAA 180387 ||| || | | ||||||||||||| Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAA 9553449 >seq4 Length=30521686 Score = 212 bits (234), Expect = 8e-50 Identities = 225/294 (77%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 181697 CAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTT 181756 ||| | || || || ||| ||||||| || ||||| || || || || || || ||||| Sbjct 19658511 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 19658452 Query 181757 ATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGC 181815 ||| | | |||||||||||| |||| ||| || | | || || || ||||| ||| | Sbjct 19658451 ATGTTATGTCAATTTGAACTTACTCGGTCTGTTCA-ATTGCGGCCTTATAATGCAATTTC 19658393 Query 181816 TTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATC 181875 || || || || || ||| | || || || ||||| || || ||||| ||||| ||||| Sbjct 19658392 ATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 19658333 Query 181876 CAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCT 181935 | |||||||||||||||||||||| || || || ||||| || || ||| | |||||| | Sbjct 19658332 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTT 19658273 Query 181936 CCAGGGCTTTCATAATTGGACGCTCAATCCCTTCCATATGATGGGTGTTGCTGG 181989 ||| || ||||||||||||||| | || || || ||||||||||| ||||| || Sbjct 19658272 CCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 19658219 Score = 154 bits (170), Expect = 2e-32 Identities = 167/219 (76%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 181697 CAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTT 181756 ||| | || || || ||| ||||||| || ||||| || || || || || || ||||| Sbjct 7261230 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 7261289 Query 181757 ATGCTCAGGCAATTTGAACTTGCTCG-TCTAATCGGAATCCGACCCTACAATGCGATTGC 181815 ||| | | ||||||||||||||||| ||| || | | || || || ||||| ||| | Sbjct 7261290 ATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCA-ATTGCGGCCTTATAATGCAATTTC 7261348 Query 181816 TTTTTCCGGTCCTATTGCTGTATTCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATC 181875 || || || || || ||||| || || || ||||| || || ||||| ||||| ||||| Sbjct 7261349 ATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 7261408 Query 181876 CAGTTGGTTCTTTGCGCCGAGTTTCGGTGTCGCGGCGAT 181914 | |||||||||||||||||||||| || || || ||||| Sbjct 7261409 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 149 bits (164), Expect = 8e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 180528 GCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAAC 180587 || |||||||| || || || ||||||||||| | || | || || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 180588 CTCAACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTGCTCAACACT 180647 || ||||| ||||| |||||| | || | ||||| | |||||||| || | || ||| Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 180648 TGGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCT 180707 ||||| || | |||| || ||| ||| ||||||| ||| || ||||| |||||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 180708 CACAACTTCCCACTTGACCTGGCAGCT 180734 ||||||||||| || ||||| || ||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 Score = 145 bits (160), Expect = 9e-30 Identities = 212/297 (71%), Gaps = 2/297 (1%) Strand=Plus/Plus Query 179738 GTGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTT 179797 ||||| | ||||||| | ||| |||| ||| | ||||| || || | || ||||| Sbjct 9700305 GTGGGGTCGCTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTT 9700364 Query 179798 CGGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCA 179856 || ||| ||||||| || || | ||| | |||||| |||| || || ||||||||| Sbjct 9700365 TGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCA 9700423 Query 179857 TCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGT 179916 ||||||| || || | || || ||||| || ||||| | || |||||| | | | Sbjct 9700424 TCGCTGCCCCTCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTT 9700483 Query 179917 ATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACT 179976 | || ||||| || ||||||||| | || ||||| |||| | || || || | |||| Sbjct 9700484 ACGGAAACAATATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACT 9700543 Query 179977 TCTATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTT 180033 | || | || |||||||| ||||| |||| |||||| | || || || ||||||| Sbjct 9700544 TTTACTCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 >seq6 Length=27870862 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 180455 TGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCA 180514 ||| || || || || | |||||||| ||||| || |||||||| ||||| | || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 180515 CTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCAC 180574 ||||||| |||| || |||||||| || || || ||||||||||| | || | || || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 180575 CATGGCATTCAACCTCAA 180592 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 >seq1 Length=39866532 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 17088751 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 17088810 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 17088811 CCTACTTGGGGAG 17088823 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||||||||||||||| || ||||| | || ||||||| | |||||||||||||| ||| Sbjct 22987578 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 22987637 Query 141314 CCTACCTGGGGAG 141326 ||||| ||||||| Sbjct 22987638 CCTACTTGGGGAG 22987650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610367668812720