Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq8 504 8e-138 seq2 477 1e-129 seq10 352 3e-92 seq4 206 3e-48 seq12 132 5e-26 seq6 96.9 4e-15 >seq8 Length=25958679 Score = 504 bits (558), Expect = 8e-138 Identities = 710/991 (72%), Gaps = 27/991 (3%) Strand=Plus/Plus Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503 || || || || | | | | ||||| | ||| || || |||||||| || |||| Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTT-TGTATTTATTATCGCCTTCATCACTGC--- 20127927 Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563 |||| | ||||| | || |||||| | | || || ||||| Sbjct 20127928 CCCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 20127971 Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623 || ||||||||||| || |||| |||| || || || | ||||| || || || Sbjct 20127972 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 20128031 Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 162683 |||||||| ||||| ||||||||||| | || || || ||||||| | || | || Sbjct 20128032 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 20128091 Query 162684 ATTCCACTTCCTGATCGGCAT--CTATGCCTACATGGGACGTGAATGGGAACTCTCTTAC 162741 | |||||| | | || | || || | | ||||| ||||| |||||||| || | Sbjct 20128092 TCTACACTTCTTACTTGGTGTAGCT-TGTC-ATATGGGTCGTGAGTGGGAACTGAGTTTC 20128149 Query 162742 CGTCTTGGTATGCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATC 162800 ||||| ||||||||||| ||||| ||| || ||||| || || |||||||| || || | Sbjct 20128150 CGTCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTAC 20128208 Query 162801 GGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGG 162860 || || ||| || || ||| | |||||||| ||||||||| | ||||| || || Sbjct 20128209 TGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 20128268 Query 162861 TATCAGTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCA 162920 || |||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||| Sbjct 20128269 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 20128328 Query 162921 TCCCTTCCACATGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCA 162980 ||| || |||||||| ||||| || ||||| ||||| ||||| || |||||||| ||||| Sbjct 20128329 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 20128388 Query 162981 CGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTA 163040 ||||| ||||| || ||| | || | || || ||||||| || || || | Sbjct 20128389 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 20128448 Query 163041 TGGTTACAAGTTCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTT 163100 ||||||| || |||||||| |||||||| || || || || || || |||||||| || Sbjct 20128449 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 20128508 Query 163101 CGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCT 163160 || || || |||||||||||||| || |||||||| ||||| || ||||||||| | Sbjct 20128509 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTT 20128568 Query 163161 TGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATT 163220 | || |||||||| || || || |||||||| || | || | || ||||| || Sbjct 20128569 GGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 20128628 Query 163221 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 163280 ||| || ||||| ||||| |||||||| || | ||||| | || ||||| || | || Sbjct 20128629 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 20128688 Query 163281 CACCTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAA 163340 || ||||| || | | |||||||| | | ||||||||||| |||||||| || || Sbjct 20128689 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 20128748 Query 163341 TGCTCACAACTTCCCACTTGACCTGGCAGCT 163371 ||||||||||||||| || ||||| || ||| Sbjct 20128749 TGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq2 Length=33962743 Score = 477 bits (528), Expect = 1e-129 Identities = 679/950 (71%), Gaps = 4/950 (0%) Strand=Plus/Minus Query 163621 TTTGATGTCCTGGATGACTGGCTTAAGC-GCGATCGTTTCGTATTTATTGGTTGGTCTGG 163679 |||||| | |||| |||||| ||| | | || ||||| || ||| | || |||||||| Sbjct 13366837 TTTGATATTATGGACGACTGG-TTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGG 13366779 Query 163680 ATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTTT 163739 || | ||| |||| ||||||| | || | || || ||| |||| || |||||||| Sbjct 13366778 CCTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTT 13366719 Query 163740 CGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAATTTTCT 163799 || || || ||||| ||||||||| |||| | ||||||| | || ||| ||||| | Sbjct 13366718 TGTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTT 13366659 Query 163800 CACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGGG 163859 || | || || || | ||||| | | | | || ||| | | || || ||||| Sbjct 13366658 AACCGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGG 13366599 Query 163860 TCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTGT 163919 || || || || || ||||| || ||| ||| | || || || |||| |||||| Sbjct 13366598 CCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGT 13366539 Query 163920 GGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTCG 163979 || ||||| || || ||||| || || ||||||||| | || ||||||||||||||||| Sbjct 13366538 TGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 13366479 Query 163980 C-CTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCG 164038 ||| || | | | || || ||||| ||| | |||||||| || |||||||| || | Sbjct 13366478 ATCTG-TTCAATTGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTG 13366420 Query 164039 TTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTG 164098 || || || | || || || ||||| ||||| |||||||||| || || ||||| Sbjct 13366419 TTTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTG 13366360 Query 164099 GAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGA 164158 | || ||||| || || ||||| || | ||| | |||||||||||||| ||||| |||| Sbjct 13366359 GCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGA 13366300 Query 164159 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTC 164218 |||| || ||||||||||||||||| || || |||||| || |||||| ||||||| Sbjct 13366299 ACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 13366240 Query 164219 ACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGG 164278 | || | || || ||||| || | | ||| || || || |||| |||||| Sbjct 13366239 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCA 13366180 Query 164279 CGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGT 164338 | ||| | | || || | ||||| |||||||| |||||||| || || ||||| |||| Sbjct 13366179 CTTTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 13366120 Query 164339 CGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTG 164398 | || ||||| |||||||| ||||| || || || ||| | ||||| || ||| | |||| Sbjct 13366119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 13366060 Query 164399 TGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTC 164458 | || || | ||| |||||| |||||||| | | ||||| ||||| || || | Sbjct 13366059 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 13366000 Query 164459 GTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTT 164518 ||| || || || || || || || | ||||| ||||||||||| || ||||||| Sbjct 13365999 TTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTT 13365940 Query 164519 TCTATACCAAGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCA 164568 |||| ||||| || || | || ||| | || | ||||| ||| | ||| Sbjct 13365939 TCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCA 13365890 Score = 170 bits (188), Expect = 2e-37 Identities = 226/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 164161 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTCAC 164220 || || ||||||||||||||||| || || |||||| || |||||| |||||||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 164221 GGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCG 164280 || | || || ||||| || | | ||| || || || ||||| ||||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 164281 TTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCG 164340 ||| | | || || | ||||| |||||||| |||||||| || || ||||| ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 164341 CAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTG 164400 || ||||| |||||||| ||||| || || || ||| | ||||| || ||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 164401 CCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGT 164460 || || | ||| |||||| |||||||| | | ||||| ||||| || || ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 164461 GCTTACGATTTTGT 164474 || || || || || Sbjct 18365241 GCCTATGACTTCGT 18365254 >seq10 Length=20731201 Score = 352 bits (390), Expect = 3e-92 Identities = 439/603 (73%), Gaps = 10/603 (2%) Strand=Plus/Plus Query 162769 GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCTGGTCTATCCTTTCGGT 162828 || ||||| || || ||||||||||| || | || || ||| || | || ||| | ||| Sbjct 18975652 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGT 18975711 Query 162829 CAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATGCTT 162888 ||||| ||||| ||| | ||||| || || || |||||| ||||||| ||| || Sbjct 18975712 CAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATT 18975771 Query 162889 GTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGT 162948 || ||||| ||||| || ||||| || ||||||| || |||||||| ||||| || ||| Sbjct 18975772 GTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGGT 18975831 Query 162949 GTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTC 163008 || ||||| ||||| || || ||||| ||||| ||||| ||||| || ||| | || Sbjct 18975832 GTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATC 18975891 Query 163009 CGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAG 163068 | || || ||||||| || || || | ||||||| || |||||||| |||||| Sbjct 18975892 GGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAG 18975951 Query 163069 ACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCA 163128 || || || || || || || |||||||| || || || || |||||||||||||| Sbjct 18975952 ACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGT 18976011 Query 163129 TTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 163188 || |||||||| || || || ||||||||| | ||||| |||||||| || || || ||| Sbjct 18976012 TTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGG 18976071 Query 163189 TTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 163248 |||| || | || | || ||||| ||||| || ||||| ||||| |||||||| Sbjct 18976072 TTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAA 18976131 Query 163249 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCA 163308 | | ||||| | || | || || ||||| || | | |||||||| Sbjct 18976132 TATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACCGTGCT 18976181 Query 163309 GGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGCA 163368 | | ||||||||||| |||||||| || ||||||||||||||||| || ||||| || Sbjct 18976182 AATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 18976241 Query 163369 GCT 163371 ||| Sbjct 18976242 GCT 18976244 >seq4 Length=30521686 Score = 206 bits (228), Expect = 3e-48 Identities = 231/306 (75%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 163894 CAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTC 163953 ||| | || || || |||| |||||| || ||||| || || ||||| || || |||||| Sbjct 19658511 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 19658452 Query 163954 ATGCTTCGGCAATTTGAACTTGCTCGC-CTGATTGGAATCAGACCCTACAATGCGATTGC 164012 ||| | | |||||||||||| |||| ||| || | | | || || ||||| ||| | Sbjct 19658451 ATGTTATGTCAATTTGAACTTACTCGGTCTG-TTCAATTGCGGCCTTATAATGCAATTTC 19658393 Query 164013 TTTCTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATC 164072 |||||||| || || ||| | || ||| || || || || || || ||||| ||||| Sbjct 19658392 ATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 19658333 Query 164073 AAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCT 164132 |||||||||| || || |||||| || ||||| || || ||||| || | ||| | Sbjct 19658332 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTT 19658273 Query 164133 TCAAGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACT 164192 |||||||||||||| ||||| |||||||| || ||||||||||||||||| || || | Sbjct 19658272 CCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATT 19658213 Query 164193 AGGCGG 164198 |||||| Sbjct 19658212 AGGCGG 19658207 Score = 136 bits (150), Expect = 4e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 163894 CAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTC 163953 ||| | || || || |||| |||||| || ||||| || || ||||| || || |||||| Sbjct 7261230 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 7261289 Query 163954 ATGCTTCGGCAATTTGAACTTGCTC-GCCTGATTGGAATCAGACCCTACAATGCGATTGC 164012 ||| | || |||||||||||||||| | ||| || | | | || || ||||| ||| | Sbjct 7261290 ATGTTACGTCAATTTGAACTTGCTCGGTCTG-TTCAATTGCGGCCTTATAATGCAATTTC 7261348 Query 164013 TTTCTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATC 164072 |||||||| || || ||||| || ||| || || || || || || ||||| ||||| Sbjct 7261349 ATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 7261408 Query 164073 AAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAAT 164111 |||||||||| || || |||||| || ||||| || Sbjct 7261409 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 132 bits (146), Expect = 5e-26 Identities = 203/287 (71%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 162385 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 162444 |||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 162445 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 162503 ||||| || || | ||| | ||||| ||||| || || |||||||| ||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 162504 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 162563 || | || || || || || ||||| | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 162564 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 162623 || ||||||||| | || |||| |||| | || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 162624 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 162670 |||||||| ||||| ||||||||||| | || || || ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 Score = 113 bits (124), Expect = 5e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 163165 GCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAAC 163224 || |||||||| || || || |||||||| || | || | || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 163225 CTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACC 163284 || ||||| ||||| |||||| | || | ||||| | || ||||| || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 163285 TGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCT 163344 ||||| || | | || ||||| | | ||||||| ||| || ||||| || ||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 163345 CACAACTTCCCACTTGACCTGGCAGCT 163371 ||||||||||| || ||||| || ||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq6 Length=27870862 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 163092 TGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCA 163151 |||||| || || || || |||||||||||||| || |||||||| ||||| || || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 163152 CTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAAC 163211 ||||||| | ||||| |||||||| || || || |||||||| || | || | || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 163212 CATGGCATTCAACCTGAA 163229 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557557389303600