Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq2 567 8e-157 seq8 542 3e-149 seq10 349 4e-91 seq4 214 2e-50 seq12 170 2e-37 seq6 109 6e-19 >seq2 Length=33962743 Score = 567 bits (628), Expect = 8e-157 Identities = 734/1005 (73%), Gaps = 8/1005 (1%) Strand=Plus/Minus Query 168495 GATGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTTTT 168554 || |||||| | | |||| ||||| |||||||| || |||||||| || | |||||| Sbjct 13366825 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 13366766 Query 168555 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTGCTTTCGTCACGAGTTGG 168614 || ||||||| | ||| | || |||||| |||| ||||| |||| || || |||| Sbjct 13366765 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 13366706 Query 168615 TATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTCTTA-CTGCGGCAG 168672 ||||| || || ||||| ||||||||| |||| || |||| ||||||| | | |||| Sbjct 13366705 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGTAGCAG 13366648 Query 168673 TTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGGGGTCCTGAGGCAC 168732 || | || || || | | | || ||| | |||| || ||||| || || |||| Sbjct 13366647 TTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 13366588 Query 168733 AAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACG 168792 |||||||||| | ||||||||| | || || || ||| ||||||| || ||||| | Sbjct 13366587 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCATG 13366528 Query 168793 GGGCTTTCGCTCTAATCGGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGT 168851 ||||||| || ||||| ||||||||| | ||||| |||||||| || || ||| || | Sbjct 13366527 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 13366468 Query 168852 ATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTT 168911 | | || || ||||| ||| | |||||||| || || |||||||||||| ||| || Sbjct 13366467 -TGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATTC 13366409 Query 168912 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 168971 | || || || ||||| ||||| ||||||| || || || ||| || || |||| Sbjct 13366408 CCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 13366349 Query 168972 ATCTTCCGATTCCTTCTCTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCAT 169031 || || |||||| | |||||| | |||||||| ||||| ||||| |||| ||||||||| Sbjct 13366348 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 13366289 Query 169032 ATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACA 169091 |||||||| || || || | || || | || |||| | || |||||||| | || Sbjct 13366288 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 13366229 Query 169092 GTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATAC-TTTCAAAGCATTTGACAG 169150 || || || ||||| | | | || ||||| ||||||| |||| | | ||| || Sbjct 13366228 GTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCA-CTTTTAACCC 13366170 Query 169151 CACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTT 169210 ||||| | || || || ||||||||||| || || || || || ||||| || ||||| Sbjct 13366169 AACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 13366110 Query 169211 TGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTAT 169270 |||| |||| || ||||| | ||||| |||||||||||||| ||||| || || | Sbjct 13366109 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCAC 13366050 Query 169271 GGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGA 169330 ||| | |||| ||| | || || | | || || ||||| ||||| | ||| ||||| Sbjct 13366049 CGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGA 13365990 Query 169331 CTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTACACCAA 169390 ||| |||||||| || ||| | ||||| |||||||| || |||||||| ||||||||||| Sbjct 13365989 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 13365930 Query 169391 GAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCTCATGA 169450 || || || || ||| | ||| ||||||| ||| | ||| || ||||| |||||||| Sbjct 13365929 AAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 13365870 Query 169451 GAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 || || | ||||||||||| || | || || || || || || Sbjct 13365869 AAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT 13365825 Score = 179 bits (198), Expect = 4e-40 Identities = 233/322 (72%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 169021 ATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTC 169080 ||||||||||||||||||| || || || | || || | || |||| | || |||| Sbjct 18364939 ATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 18364998 Query 169081 ATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAACAAGCAAATACTTTCAAAG 169140 |||| | || || || || ||||| | | | || ||||| |||||||| ||| | Sbjct 18364999 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCG 18365058 Query 169141 CATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGT 169200 | ||| || ||||| | || || || ||||||||||| || || || || || |||| Sbjct 18365059 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 18365118 Query 169201 CTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTG 169260 | || ||||||||| |||| || ||||| | ||||| |||||||||||||| |||| Sbjct 18365119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 18365178 Query 169261 TTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 169320 | || || | ||| | |||| ||| | || || | | || || ||||| ||||| | Sbjct 18365179 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 18365238 Query 169321 GTGCTTATGACTTTGTTTCCCA 169342 |||| |||||||| |||||||| Sbjct 18365239 GTGCCTATGACTTCGTTTCCCA 18365260 Score = 140 bits (154), Expect = 4e-28 Identities = 133/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 169326 TATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTTGAGACGTTCTAC 169385 |||||||| |||||||| || ||| | ||||| |||||||| || |||||||| |||||| Sbjct 13367198 TATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTAC 13367257 Query 169386 ACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGGTTAGCACCTATTGATCAACCT 169445 ||||| || || || || ||||| ||| ||||||| ||| | ||| || ||||| ||| Sbjct 13367258 ACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCT 13367317 Query 169446 CATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGAGGTAATGCCCT 169495 ||||| || || | ||||||||||| || || || || || || || || Sbjct 13367318 CATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 13367367 Score = 86.0 bits (94), Expect = 7e-12 Identities = 99/132 (75%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 167922 TTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTG 167981 ||||| || || || ||||| |||||||| ||| | ||||||| ||| ||| | Sbjct 14982316 TTCAATCTAAATGGGTTCAATTTCAACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATT 14982258 Query 167982 CCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGT 168041 ||||||||| || | |||||||||| ||| | ||||||||| |||||||| ||| Sbjct 14982257 TATACTTGGGCTGATATCATCAACCGTGCAAATCTTGCTATGGAAGTAATGCACGAACGT 14982198 Query 168042 AATGCTCACAAC 168053 ||||||||| || Sbjct 14982197 AATGCTCACCAC 14982186 >seq8 Length=25958679 Score = 542 bits (600), Expect = 3e-149 Identities = 710/991 (72%), Gaps = 25/991 (3%) Strand=Plus/Plus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| ||| | ||| | || ||||| | |||||||| || |||| |||||||| ||| | Sbjct 20127811 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 20127870 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 ||| |||||||| || | ||||| | ||| || || ||||||||| || ||| | Sbjct 20127871 GATAATCCCTACCTTATCGACCGCAACTTT-TGTATTTATTATCGCCTTCATCACTGCCC 20127929 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 ||| ||| ||| ||| |||||| | | || || |||| Sbjct 20127930 CTCTCGTGAGCAT-------------------GTTTCTGGTTTTTTACTTTACGGAAACA 20127970 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | || ||||||||||| || ||||| ||||| || || || | ||||| || || | Sbjct 20127971 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 20128030 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 | |||||||| ||| | | || |||||||| |||||||| ||||||| | || | | Sbjct 20128031 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 20128090 Query 167386 TTTTCCACTTCCTGATTGGCAT--CTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTA 167443 || | |||||| | |||| | || || | |||||||||||||||||||||| || Sbjct 20128091 TTCTACACTTCTTACTTGGTGTAGCT-TGTC-ATATGGGTCGTGAGTGGGAACTGAGTTT 20128148 Query 167444 CCGTCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCAGCATC 167503 |||||| ||||||||||| ||||| ||||||||| || ||||| || || || || | Sbjct 20128149 CCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTAC 20128208 Query 167504 TGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGG 167563 |||||| ||| | || ||| | |||||||| ||||||||| | |||||| | || Sbjct 20128209 TGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 20128268 Query 167564 TATCTCTGGTACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCA 167623 || |||||||| ||||||| ||| |||| ||||| |||||||| |||||||| ||||| Sbjct 20128269 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 20128328 Query 167624 CCCCTTCCATATGCTCGGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCA 167683 || || || ||| | || || ||||| |||||||||||||| || |||||||| ||||| Sbjct 20128329 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 20128388 Query 167684 CGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTA 167743 ||||| |||| |||||| || | | |||||||| |||| || || || | Sbjct 20128389 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 20128448 Query 167744 TGGTTACAAGTTCGGTCAGGAAGAAGAGACGTATAACATCGTCGCTGCTCATGGTTACTT 167803 ||||||| || ||||| || |||||||| ||||| || || || ||||||||||| || Sbjct 20128449 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 20128508 Query 167804 CGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTT 167863 || || | ||||||||||| || || |||||||| || ||| | ||||||||||| Sbjct 20128509 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTT 20128568 Query 167864 GGCAGCATGGCCTGTTGTTGGTATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATT 167923 || ||| |||||||| || || || |||| || Sbjct 20128569 GGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 20128628 Query 167924 CAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTGCC 167983 ||| || ||||| ||||| |||||||| ||| | ||||||| ||| ||| | Sbjct 20128629 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 20128688 Query 167984 TACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAA 168043 ||||||||| || | ||||||||||| ||| ||||||||||| |||||||| ||||| Sbjct 20128689 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 20128748 Query 168044 TGCTCACAACTTCCCTCTCGACCTTGCTGCT 168074 |||||||||||||||||| ||||| |||||| Sbjct 20128749 TGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq10 Length=20731201 Score = 349 bits (386), Expect = 4e-91 Identities = 434/604 (72%), Gaps = 10/604 (2%) Strand=Plus/Plus Query 167471 TGTTGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGG 167530 ||||||||| || ||||| || || || || ||||||| ||| | | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 167531 TCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATGCT 167590 |||||| ||||| ||| | |||||| | || || |||||||| ||||||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 167591 TGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGG 167650 ||| ||||| ||||| || |||||||| ||||| | || || ||| | || || ||||| Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 167651 CGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGT 167710 |||||||||||||| || || ||||| ||||| ||||| |||| |||||| || | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 167711 TCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGA 167770 | |||||||| |||| || || || | ||||||| || ||||| || ||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 167771 GACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATC 167830 ||| ||||| || || || ||||||||||| || || || | ||||||||||| || Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 167831 CTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTG 167890 || |||||||| || || | |||||||||||||| || |||||||| || || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 167891 GTNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCAACCTGAACGGTTTCAACTTCAACCA 167950 || ||||| || ||||| ||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 167951 GTCTATCCTTGATAGTTCTGGTAAGGTTCTGCCTACTTGGGCAGACGTGCTCAACCGTGC 168010 | | | ||||||| | ||| ||||||||| || | |||||||||| Sbjct 18976131 ATATGTAGTTGATAG-CCAATTAA---------TACTTGGGCTGATATCATCAACCGTGC 18976180 Query 168011 TGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGC 168070 | ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| || Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 18976240 Query 168071 TGCT 168074 |||| Sbjct 18976241 TGCT 18976244 Score = 168 bits (186), Expect = 7e-37 Identities = 162/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 167520 TATCCTTTCGGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTC 167579 || ||| | |||||||| ||||||||| | |||||| | || || |||||||| ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 167580 AACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTC 167639 |||| ||| |||| ||||| |||||||| |||||||| ||||| || || || ||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 167640 GGCGTTGCTGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACC 167699 || || ||||| |||||||||||||| || |||||||| ||||| ||||| |||| ||| Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 167700 TCTTCGCTGGTTCGTGAAACCACCGAAA 167727 ||| || | | |||||||| |||| Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAA 9553449 >seq4 Length=30521686 Score = 214 bits (236), Expect = 2e-50 Identities = 229/300 (76%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 168750 TGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATC 168809 ||||||||| | || || || ||| ||||||| || ||||| |||||||| || ||||| Sbjct 19658517 TGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATA 19658458 Query 168810 GGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGC 168868 ||||||||| | |||| |||||||| | || ||| || | | || || || ||||| Sbjct 19658457 GGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAATGC 19658399 Query 168869 TATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGG 168928 ||| | |||||||| || |||||| |||||||| ||| || || || || || ||||| Sbjct 19658398 AATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGG 19658339 Query 168929 TCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTTCT 168988 ||||| ||||||| || || || ||| || || |||| || || |||||| | || Sbjct 19658338 GCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCT 19658279 Query 168989 CTTCCTACAAGGATTCCATAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGG 169048 |||| | |||||||| ||||| ||||| |||| ||||||||||||||||| || || || Sbjct 19658278 CTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 19658219 Score = 156 bits (172), Expect = 5e-33 Identities = 171/225 (76%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 168750 TGGTGTCAACTTGGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATC 168809 ||||||||| | || || || ||| ||||||| || ||||| |||||||| || ||||| Sbjct 7261224 TGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATA 7261283 Query 168810 GGTTTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGC 168868 ||||||||| | ||||| |||||||| || || ||| || | | || || || ||||| Sbjct 7261284 GGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGC 7261342 Query 168869 TATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGG 168928 ||| | |||||||| || ||||||||||||||| ||| || || || || || ||||| Sbjct 7261343 AATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGG 7261402 Query 168929 TCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 168973 ||||| ||||||| || || || ||| || || |||| || Sbjct 7261403 GCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 167287 TTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCATCTGGGAAGCAGCAACCCTCG 167346 ||||| ||||| || || || | ||||| || || || |||||||| ||| | | | Sbjct 7243066 TTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTG 7243125 Query 167347 ACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAGTTTTCCACTTCCTGATTGGCA 167406 | |||||||| |||||||||||||||| | || | ||| | |||||| | |||| Sbjct 7243126 ATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 7243185 Query 167407 TCTATGCCTATATGGGTCGTGAGTGGGAACT 167437 | | ||||||||||||||||||||||| Sbjct 7243186 TAGCTTGTTATATGGGTCGTGAGTGGGAACT 7243216 >seq12 Length=23561512 Score = 170 bits (188), Expect = 2e-37 Identities = 226/311 (73%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 167087 CTTTTGCGATTGGGTTACCAGCACTAACAACCGTCTGTATGTCGGTTGGTTCGGCGTTCT 167146 ||| ||| | ||| | || ||||| | |||||||| || | || ||||| || ||| | Sbjct 9700314 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 9700373 Query 167147 GATGATCCCTACGTTGCTTGCAGCAACCATCTGT-TTCATCATCGCCTTCGTCGGTGCTC 167205 |||||||||||| || | | |||| | ||||| || || ||||||||| ||| ||| | Sbjct 9700374 GATGATCCCTACCTTATTGACCGCAA-CTTCTGTATTTATTATCGCCTTCATCGCTGCCC 9700432 Query 167206 CTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACA 167265 |||| | || || |||||||| || || | ||| |||||| | | || || |||| Sbjct 9700433 CTCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACA 9700492 Query 167266 ACATCATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCTATCCCA 167325 | || ||||||||| | || ||||| |||||| ||| || || | ||||| || | | Sbjct 9700493 ATATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAA 9700552 Query 167326 TCTGGGAAGCAGCAACCCTCGACGAGTGGTTGTACAATGGTGGTCCTTTCCAACTCGTAG 167385 | |||||||| ||| | | || |||||||| |||||||| ||||||| | || | | Sbjct 9700553 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 9700612 Query 167386 TTTTCCACTTC 167396 || | |||||| Sbjct 9700613 TTCTACACTTC 9700623 Score = 114 bits (126), Expect = 1e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 167922 TTCAACCTGAACGGTTTCAACTTCAACCAGTCTATCCTTGATAGTTCTGGTAAGGTTCTG 167981 ||||| || ||||| ||||| |||||| | ||| | ||||||| ||| ||| | Sbjct 9700785 TTCAATCTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATT 9700844 Query 167982 CCTACTTGGGCAGACGTGCTCAACCGTGCTGGTCTGGGTATGGAAGTTATGCACGAGCGT 168041 ||||||||| || | |||| |||||| ||| ||||||| ||| || ||||| ||| Sbjct 9700845 AATACTTGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGT 9700904 Query 168042 AATGCTCACAACTTCCCTCTCGACCTTGCTGCT 168074 ||| |||||||||||||||| ||||| |||||| Sbjct 9700905 AATACTCACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq6 Length=27870862 Score = 109 bits (120), Expect = 6e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 169305 CTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAGAT 169364 || ||||| ||| | |||| |||||||| |||| |||||| | | | |||||| || || Sbjct 6536584 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAAAACAT 6536525 Query 169365 CCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCATGG 169424 || || |||||||| |||| |||||| || || || || ||||| || ||||||| ||| Sbjct 6536524 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 6536465 Query 169425 TTAGCACCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCCCCGA 169484 | | || |||| ||| ||| || || | ||||||||||| || || || || Sbjct 6536464 ATGATAGCTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGT 6536405 Query 169485 GGTAA 169489 || || Sbjct 6536404 GGAAA 6536400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560581244983200