Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq2 540 1e-148 seq8 518 4e-142 seq10 381 7e-101 seq4 215 6e-51 seq12 140 4e-28 seq6 91.5 2e-13 >seq2 Length=33962743 Score = 540 bits (598), Expect = 1e-148 Identities = 726/1008 (72%), Gaps = 2/1008 (0%) Strand=Plus/Minus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 || |||||| | | | || || ||||| ||||| || |||||||| || | ||| || Sbjct 13366825 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 13366766 Query 183253 CCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 183312 || ||||||| | || | || |||||| |||| || ||| ||||||| || |||| Sbjct 13366765 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 13366706 Query 183313 TATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCTGT 183371 |||||||||||| | || ||||||| | |||||| || ||||||| | | ||| || Sbjct 13366705 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGTAGCAGT 13366647 Query 183372 CTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCTCA 183431 || | ||||| | | | | || ||| | || |||| ||||| || || | || Sbjct 13366646 TTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCACA 13366587 Query 183432 AGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGG 183491 |||||| ||| || ||||| ||| | || || || |||| |||||| || ||||| || Sbjct 13366586 AGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCATGG 13366527 Query 183492 TGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTAT 183551 || ||||| || || ||||||||| | || || |||||||||||||| | || | Sbjct 13366526 GGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATT 13366467 Query 183552 CCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCT 183611 | ||||| ||||| ||| | |||||||| || |||||||||||||| ||||||| Sbjct 13366466 GTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATTCCC 13366407 Query 183612 TATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAAT 183671 || ||||||||||| || || ||||||||||| || ||||| || |||||||| || Sbjct 13366406 GATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 13366347 Query 183672 CTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATAT 183731 ||| ||||| | | ||| | || || || || || |||||||| ||||| || ||||| Sbjct 13366346 ATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATAT 13366287 Query 183732 GATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACAGT 183791 |||||||||||| || || |||| | || || || | ||||| ||||| | || || Sbjct 13366286 GATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACCGT 13366227 Query 183792 AGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCAC 183851 || || || | | ||| || || || |||| || || | ||| | | || Sbjct 13366226 GGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCCAAC 13366167 Query 183852 TCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGG 183911 ||||| ||||| || ||||| ||||| || || ||||| || ||||| |||||||| || Sbjct 13366166 TCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTTGG 13366107 Query 183912 GGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGG 183971 ||||| ||| |||||| |||||||| || ||||||||| | ||||| || |||| || Sbjct 13366106 TGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACCGG 13366047 Query 183972 TCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTT 184031 | | ||| | | |||||||| | | || || ||||| || || | ||| ||||| || Sbjct 13366046 TTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGACTT 13365987 Query 184032 TGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAA 184091 || || || ||| | ||||| |||||||| ||||||||||| |||||||| || || Sbjct 13365986 CGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAA 13365927 Query 184092 CATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAA 184151 || ||| | || | || | ||||| ||| | ||| || ||||| || ||||| || Sbjct 13365926 TATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAA 13365867 Query 184152 TTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 | ||||||| || |||||||| ||| | || || ||||||| ||| Sbjct 13365866 TCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCTTTAATG 13365819 Score = 174 bits (192), Expect = 2e-38 Identities = 227/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 183721 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCAT 183780 || || ||||||||||||||||| || || |||| | || || || | ||||| ||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 183781 GGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCA 183840 || | || || || || || | | ||| || || || ||||| || ||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 183841 TTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCA 183900 ||| | | ||||||| ||||| || ||||| ||||| || || ||||| || ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 183901 CAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTT 183960 |||||||| || ||||| ||| |||||| |||||||| || ||||||||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 183961 CCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGT 184020 || |||| ||| | ||| | | |||||||| | | || || ||||| || || ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 184021 GCTTATGATTTTGT 184034 || ||||| || || Sbjct 18365241 GCCTATGACTTCGT 18365254 Score = 114 bits (126), Expect = 2e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 184039 CAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTT 184098 || || ||| | ||||| |||||||| ||||||||||| |||||||| || || || ||| Sbjct 13367213 CAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 13367272 Query 184099 CTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATA 184158 | || || || | ||||| ||| | ||| || ||||| || ||||| ||| ||||| Sbjct 13367273 TTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATA 13367332 Query 184159 TTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 || || |||||||| |||| | || || ||||||| ||| Sbjct 13367333 TTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAATG 13367373 >seq8 Length=25958679 Score = 518 bits (574), Expect = 4e-142 Identities = 610/822 (74%), Gaps = 6/822 (1%) Strand=Plus/Plus Query 181962 TATGGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCAC 182021 || || ||||| || ||||||||||| || | || | || || || || | ||| Sbjct 20127961 TACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCAC 20128020 Query 182022 TTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTC 182081 || |||||||| ||||||||||| || ||||||||||| | || || || ||||||| Sbjct 20128021 TTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTAT 20128080 Query 182082 CAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCCT---ACATGGGACGTGAGTGG 182138 | || ||||| | |||||| | | || | || || | | ||||| ||||||||| Sbjct 20128081 GAGCTAATTGTTCTACACTTCTTACTTGG--TGTA-GCTTGTCATATGGGTCGTGAGTGG 20128137 Query 182139 GAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTC 182198 ||||| || ||| | ||||||||||| ||||| ||| ||||| || ||||| || Sbjct 20128138 GAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTT 20128197 Query 182199 GCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCA 182258 || || || ||||||| ||||| || ||| | |||||||| ||||| |||| Sbjct 20128198 GCGGCTGCTACTGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGT 20128257 Query 182259 ATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAAC 182318 ||||| | ||||| || || || ||||||| |||| | || ||||| || ||||| ||| Sbjct 20128258 ATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAAC 20128317 Query 182319 ATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTT 182378 || ||||||||||| || |||||||| |||||||| ||||||||||| ||||| || || Sbjct 20128318 ATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTC 20128377 Query 182379 AGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAG 182438 ||||| ||||| ||||| ||||| || ||| | || | || || ||||| | || Sbjct 20128378 AGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAA 20128437 Query 182439 TCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGTTGCAGCC 182498 || || | ||||||| || |||||||| |||||||| ||||| || || || || Sbjct 20128438 TCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCT 20128497 Query 182499 CATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTG 182558 ||||| || || || || || ||||||||||| || || |||||||| ||||| || Sbjct 20128498 CATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTA 20128557 Query 182559 CACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCC 182618 ||||||||| | | || |||||||| || || || |||||||| || | ||| | Sbjct 20128558 CACTTCTTCTTGGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGT 20128617 Query 182619 ACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGT 182678 || ||||| ||||| || ||||| ||||| |||||||| || | ||||| | || ||| Sbjct 20128618 ACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGT 20128677 Query 182679 CGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATG 182738 || || |||| |||||||| ||| | | ||||||||| ||||||||||||||| ||| Sbjct 20128678 CGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATG 20128737 Query 182739 CATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCTGCT 182780 || || ||||| || ||||||||||| ||||| || |||||| Sbjct 20128738 CACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq10 Length=20731201 Score = 381 bits (422), Expect = 7e-101 Identities = 446/604 (74%), Gaps = 10/604 (2%) Strand=Plus/Plus Query 182177 TGTAGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGG 182236 ||| ||||| || ||||| || || || || ||||||| ||||| | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 182237 TCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTT 182296 |||||| |||| |||| ||||| | ||||| || || || ||||||| |||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 182297 GGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGG 182356 || ||||| || || || ||||| |||||||||| || |||||||| |||||||| || Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 182357 TGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGT 182416 ||||||||| ||||| || |||||||| ||||| ||||| ||||| || ||| | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 182417 CCGTGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGA 182476 | | || || ||||| | || || || | ||||||| || |||||||| ||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 182477 GACCTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATC 182536 ||| ||||| || || || || ||||| || || || || || ||||||||||| || Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 182537 ATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTG 182596 || |||||||| || || || ||||||||| | ||||| |||||||| || || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 182597 GTTCACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCA 182656 ||||| || | ||| | || ||||| ||||| || ||||| ||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 182657 GTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGC 182716 | | ||||| | || |||| |||||||| ||| | | |||||||| Sbjct 18976131 ATATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACCGTGC 18976180 Query 182717 TGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGC 182776 | ||||||||||||||| ||||| || ||||| || ||||||||||| ||||| || || Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 18976240 Query 182777 TGCT 182780 |||| Sbjct 18976241 TGCT 18976244 Score = 159 bits (176), Expect = 4e-34 Identities = 145/183 (79%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 182226 TATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTC 182285 || ||| | |||||||| ||||| |||| ||||| | ||||| || || || ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 182286 AACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTG 182345 |||| |||| | || ||||| || ||||| ||||| ||||||||||| || |||||||| Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 182346 GGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACA 182405 |||||||| ||||||||||| ||||| || || ||||| ||||| ||||| ||||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 182406 TCT 182408 ||| Sbjct 9553476 TCT 9553474 >seq4 Length=30521686 Score = 215 bits (238), Expect = 6e-51 Identities = 236/314 (75%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 183445 CGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTC 183504 || ||||| ||| | || || || |||| |||||| || ||||| || || ||||| || Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 183505 ATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAAT 183564 || ||||||||| | | || ||||||||| |||| | || | || ||||| ||| Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAATTGCGGCCTTATAAT 19658401 Query 183565 GCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTG 183624 || ||| | |||||||| || || ||| ||||||| |||||||| || ||||||||| Sbjct 19658400 GCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTG 19658341 Query 183625 GGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTA 183684 || || || ||||||||||| || ||||| || |||||||| || ||| ||||| | Sbjct 19658340 GGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATC 19658281 Query 183685 TTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCT 183744 | ||| | || || || || || |||||||| ||||| || ||||||||||||||||| Sbjct 19658280 CTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCC 19658221 Query 183745 GGTATACTAGGAGG 183758 || || |||| || Sbjct 19658220 GGAGTATTAGGCGG 19658207 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 183445 CGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTC 183504 || ||||| ||| | || || || |||| |||||| || ||||| || || ||||| || Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 183505 ATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAAT 183564 || ||||||||| | || || |||||||||||||| | || | || ||||| ||| Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAAT 7261340 Query 183565 GCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTG 183624 || ||| | |||||||| || || ||||||||||| |||||||| || ||||||||| Sbjct 7261341 GCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTG 7261400 Query 183625 GGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAAT 183671 || || || ||||||||||| || ||||| || |||||||| || Sbjct 7261401 GGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/128 (76%), Gaps = 6/128 (5%) Strand=Plus/Plus Query 182019 CACTTCTACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCT 182078 ||||| |||||||| ||||||||||| || ||||||||||| | || || ||||||||| Sbjct 7243092 CACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCT 7243151 Query 182079 TTCCAACTGGTTGTTTTCCACTTCCTGATCGGCATCTACGC---CTACATGGGACGTGAG 182135 | | || ||||| | |||||| | | || | || || || ||||| |||||| Sbjct 7243152 TATGAGCTAATTGTTCTACACTTCTTACTTGG--TGTA-GCTTGTTATATGGGTCGTGAG 7243208 Query 182136 TGGGAACT 182143 |||||||| Sbjct 7243209 TGGGAACT 7243216 >seq12 Length=23561512 Score = 140 bits (154), Expect = 4e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 182574 GCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCACGATGGCATTCAAC 182633 || |||||||| || || || |||||||| || | ||| | || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 182634 CTCAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTCCTTAACACT 182693 || ||||| ||||| |||||| | || | ||||| | || ||||| || |||| ||| Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 182694 TGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCA 182753 ||||| ||| | | || |||||| ||||||||||| ||| || || || ||||| | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 182754 CACAACTTCCCACTAGATCTTGCTGCT 182780 ||||||||||| ||||| || |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 Score = 132 bits (146), Expect = 6e-26 Identities = 217/310 (70%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853 |||||| | ||| | || ||| | || ||||| || | || ||||||||||| || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912 |||||||| || | ||| | ||||| ||||| || || | || ||| | || || || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972 ||| | ||||| || ||||| || || | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032 || ||||||||| | || | || | || | || || || | ||||| ||| |||| Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTTGT 182092 ||||||||||| || ||||||||||| | || || || ||||||| | || |||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 9700613 Query 182093 TTTCCACTTC 182102 | | |||||| Sbjct 9700614 TCTACACTTC 9700623 >seq6 Length=27870862 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 182501 TGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCCCGTTCCTTGCA 182560 ||| || || || || || ||||||||||| || || |||||||| ||||| || || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 182561 CTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTTGGTGTCTCCAC 182620 ||||||| | ||||| |||||||| || || || |||||||| || | ||| | || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 182621 GATGGCATTCAACCTCAA 182638 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611666806808400