Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq8 610 7e-170 seq2 540 1e-148 seq10 381 7e-101 seq12 183 3e-41 seq4 183 3e-41 seq6 95.1 1e-14 >seq8 Length=25958679 Score = 610 bits (676), Expect = 7e-170 Identities = 729/989 (74%), Gaps = 23/989 (2%) Strand=Plus/Plus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||| | ||| | ||| |||| | ||||||||||| |||| |||||||||||| | Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 164824 ATGATCCCCTGTTTGCTCG-CCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTC 164881 || ||||| || ||| |||| || ||||| ||||||| || |||||| |||| | Sbjct 20127872 ATAATCCCTACCTTA-TCGACCGCAACT-TTTGTATTTATTATCGCCTTCATCACTGCCC 20127929 Query 164882 CCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACA 164941 | | |||||| | ||| | |||| | || | ||||| |||| Sbjct 20127930 CTC-------------------TCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACA 20127970 Query 164942 ACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTA 165001 | || ||||||||||| | |||| ||||| || |||||| | ||||| || || | Sbjct 20127971 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 20128030 Query 165002 TTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTG 165061 |||||||||||||| | | ||||| ||||| ||||| || |||||||| || | ||| Sbjct 20128031 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 20128090 Query 165062 TCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACC 165121 | | |||||| | | ||||||||||| | ||||||||||||||||||||| || || Sbjct 20128091 TTCTACACTTCTTACTTGGTGTAGCTTGTCATATGGGTCGTGAGTGGGAACTGAGTTTCC 20128150 Query 165122 GCCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCG 165181 | || |||||||||||||||||| || |||||| || ||||| || |||||| | | Sbjct 20128151 GTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACTG 20128210 Query 165182 CAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTA 165241 | |||||| || || ||| | |||||||| ||||||||||||||||||||| | || | Sbjct 20128211 CTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAA 20128270 Query 165242 TCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATC 165301 | ||||||||||| |||| |||| | || ||||| ||||| |||||||| |||||||||| Sbjct 20128271 TATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATC 20128330 Query 165302 CGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATG 165361 | || |||||| | || || ||||| |||||||| || || || ||| ||||||||||| Sbjct 20128331 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATG 20128390 Query 165362 GAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACG 165421 | | || || || | || | || || ||||||| || | || | | Sbjct 20128391 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGG 20128450 Query 165422 GTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCG 165481 |||| | ||||| ||||| |||||||| ||||| || || || || || || || || | Sbjct 20128451 GTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTG 20128510 Query 165482 GTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCG 165541 | || | || |||||||| || || ||||| || |||||| | ||||||||| | | Sbjct 20128511 GCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTTGG 20128570 Query 165542 CAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 165601 ||| ||||||||||| || || |||||||||||| | ||| |||| || ||||| |||| Sbjct 20128571 TAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCA 20128630 Query 165602 ACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTA 165661 | || ||||| ||||| |||||||| ||| | |||||||| || | || || Sbjct 20128631 ATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATA 20128690 Query 165662 CTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACG 165721 |||||||||| | | ||||||||| ||| ||||||||||| ||||| || ||||| | Sbjct 20128691 CTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATG 20128750 Query 165722 CTCACAACTTCCCCCTCGACCTCGCTGCT 165750 ||||||||||||| || ||||| |||||| Sbjct 20128751 CTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq2 Length=33962743 Score = 540 bits (598), Expect = 1e-148 Identities = 732/1011 (72%), Gaps = 12/1011 (1%) Strand=Plus/Minus Query 166173 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTT 166232 ||||||||| | | | || ||||| |||||||| || |||||||| || | ||| || Sbjct 13366825 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 13366766 Query 166233 CCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTGG 166292 || ||||||| | ||| | || |||||| | || ||||| ||||| || || |||| Sbjct 13366765 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 13366706 Query 166293 TATACTCATGGACTCGCAAGCAGTTATCTGGAGGGT-GCAAACTTTCTTA-CTGCGGCAG 166350 ||||| |||||| | || || ||| |||| ||| |||| ||||||| | | |||| Sbjct 13366705 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCTTAACCGTAGCAG 13366648 Query 166351 TTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCTC 166410 |||| | || || || | | | || ||| | | || || ||||| || || || | Sbjct 13366647 TTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 13366588 Query 166411 AAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACG 166470 |||||||||| | ||||| ||| | || || || ||| | |||||||||||||| | Sbjct 13366587 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCATG 13366528 Query 166471 GTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGT 166529 | |||||||| ||||| ||||||||| | || || |||||| | ||||| ||| | | Sbjct 13366527 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT 13366468 Query 166530 ATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTT 166589 | | || || |||||||| | || ||||| || |||||||| || ||| || || Sbjct 13366467 TGTGG-CCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATTC 13366409 Query 166590 CTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCA 166649 | || || || ||||| ||||| ||||||| || || || ||| || || |||| Sbjct 13366408 CCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 13366349 Query 166650 ATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCAT 166709 || || |||||| |||| ||| | |||||||| || || ||||| |||||||||||||| Sbjct 13366348 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 13366289 Query 166710 ATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTACA 166769 |||||||| || || || | | || | || |||| | || || ||||| | || Sbjct 13366288 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 13366229 Query 166770 GTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATAC-TTTCAAGGCA--TTCGAC 166826 || || |||||||| | | | || ||||| ||||||| |||| ||| || || Sbjct 13366228 GTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTC---GCACTTTTAAC 13366172 Query 166827 TCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATC 166886 | ||||||| ||||| || ||||||||||| || || || |||| |||||| || ||| Sbjct 13366171 CCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATC 13366112 Query 166887 TTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTT 166946 || ||| |||| ||| ||||| | ||||| |||||||||||||| ||||| || || Sbjct 13366111 TTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTC 13366052 Query 166947 ATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTAT 167006 | ||| | |||| ||| | || || | | || || ||||| ||||| | ||| ||| Sbjct 13366051 ACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTAT 13365992 Query 167007 GACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACC 167066 ||||| |||||||| ||| | | ||||| || |||||||| ||||| || ||||| ||| Sbjct 13365991 GACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACC 13365932 Query 167067 AAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCAT 167126 || || ||||| || || ||||||| ||| | ||||||||| || ||||| |||||| Sbjct 13365931 AAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCAT 13365872 Query 167127 GAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 || | | | |||||||||| ||||||| || | || |||||||| ||| Sbjct 13365871 GAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCTTTAA 13365821 Score = 190 bits (210), Expect = 2e-43 Identities = 234/320 (73%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 166701 CCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCAT 166760 ||||||||||||||||| || || || | | || | || |||| | || || ||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 166761 GGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCA 166820 || | || || || |||||||| | | | || ||||| |||||||| ||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 166821 TTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCT 166880 || || | ||||||| |||||||| ||||||||||| || || || |||| |||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 166881 CAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTT 166940 || ||||| ||| |||| ||| ||||| | ||||| |||||||||||||| ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 166941 CCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGT 167000 || || | ||| | |||| ||| | || || | | || || ||||| ||||| ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 167001 GCTTATGACTTTGTTTCCCA 167020 || |||||||| |||||||| Sbjct 18365241 GCCTATGACTTCGTTTCCCA 18365260 Score = 105 bits (116), Expect = 8e-18 Identities = 125/168 (74%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 165562 ATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTC 165621 || |||||||||||| | ||| |||| || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 165622 AACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAAC 165681 ||||| ||| | |||||||| || | || |||||||||||| | | ||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 165682 CGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAAC 165729 ||||| ||| | ||||||||| ||||| || ||||| |||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 381 bits (422), Expect = 7e-101 Identities = 449/608 (74%), Gaps = 11/608 (2%) Strand=Plus/Plus Query 165144 TTGC-GTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCTGGTCTATCCTT 165202 |||| || |||||| || ||||| || |||||| | || |||||| || | || ||| Sbjct 18975647 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTA 18975706 Query 165203 TCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTATA 165262 | |||||||| ||||||| ||||||||||||| | || || ||||||||||| |||| || Sbjct 18975707 TTGGTCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTA 18975766 Query 165263 TGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTCGGCGTTG 165322 || | || ||||| ||||| |||||||| |||||||||| || |||||| | || || | Sbjct 18975767 TGATTGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAG 18975826 Query 165323 CTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGTTACTTCCTCAC 165382 |||| |||||||| || || || || |||||||||||| | || || || Sbjct 18975827 CTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTT 18975886 Query 165383 TCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTTATAAGTTTGGACAAGAAG 165442 | || | || || ||||||| || | || | ||||| | ||||| ||||| | Sbjct 18975887 TGATCGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGG 18975946 Query 165443 AAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCTCATTTTCCAATACG 165502 ||||||| ||||| || || || || || || || || || || | || |||||||| | Sbjct 18975947 AAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATG 18976006 Query 165503 CATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGTA 165562 | || ||||| || || || | ||||||||| | || || ||||||||||| || | Sbjct 18976007 CTAGTTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGA 18976066 Query 165563 TCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCA 165622 | ||||||| |||| | ||| |||| || ||||| ||||| || ||||| ||||| |||| Sbjct 18976067 TTTGGTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCA 18976126 Query 165623 ACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTTGGGCTGACGTTCTGAACC 165682 |||| | | | |||||||| || || |||||||||||| | | |||| Sbjct 18976127 ACCAATATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACC 18976176 Query 165683 GTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCACAACTTCCCCCTCGACC 165742 ||||| ||| ||||||||||| ||||| || ||||| |||||||||||||| || |||| Sbjct 18976177 GTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACC 18976236 Query 165743 TCGCTGCT 165750 | |||||| Sbjct 18976237 TAGCTGCT 18976244 Score = 170 bits (188), Expect = 2e-37 Identities = 138/167 (83%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 165196 TATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTACTTTT 165255 || ||| | |||||||| ||||||||||||||||||||| | || || ||||||||||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 165256 AACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACATGCTC 165315 |||| |||| | || ||||| ||||| |||||||| ||||||||||| || |||||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 165316 GGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 165362 || || ||||| |||||||| || || || ||| |||||||||||| Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 9553490 >seq12 Length=23561512 Score = 183 bits (202), Expect = 3e-41 Identities = 228/310 (74%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||| | ||| | ||| |||| | ||||||||||| | || ||||| |||||| | Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 164824 ATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTGCTCC 164882 |||||||| || | |||| || | ||| ||||||| || ||||||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 164883 CCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAA 164942 || | || ||||||||||||||||| | ||| | |||| | || | ||||| ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 164943 CATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTAT 165002 || ||||||||| | | |||| |||||| || |||||| | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 165003 TTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGT 165062 ||||||||||||| | | ||||| ||||| ||||| || |||||||| || | |||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 9700613 Query 165063 CTTCCACTTC 165072 | |||||| Sbjct 9700614 TCTACACTTC 9700623 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 165544 GCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAAC 165603 || ||||||||||| || || |||||||||||| | ||| |||| || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 165604 CTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACT 165663 || ||||| ||||| |||||| | ||| | |||||||| || | || |||| Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 165664 TGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCT 165723 |||||||| | | || |||||| ||| ||||||| ||| || || || ||||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 165724 CACAACTTCCCCCTCGACCTCGCTGCT 165750 ||||||||||| || ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq4 Length=30521686 Score = 183 bits (202), Expect = 3e-41 Identities = 222/300 (74%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 166428 TGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATT 166487 ||||| ||| | || || || ||| | |||||||||||||| || |||||||| ||||| Sbjct 19658517 TGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATA 19658458 Query 166488 GGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGGTATTCGTCCGTACAATGC 166546 ||||||||| | | || |||||| | |||| ||| | | | || || || ||||| Sbjct 19658457 GGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAATGC 19658399 Query 166547 AATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGG 166606 ||| | || ||||| || || ||| | || ||| || || || || || || ||||| Sbjct 19658398 AATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGG 19658339 Query 166607 TCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCT 166666 ||||| ||||||| || || || ||| || || |||| || || |||||| |||| Sbjct 19658338 GCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCT 19658279 Query 166667 TTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCATATGATGGGTGTAGCAGG 166726 ||| | |||||||| || || ||||| |||||||||||||||||||||| || || || Sbjct 19658278 CTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 19658219 Score = 131 bits (144), Expect = 2e-25 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 164963 TTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGCTGCAACCATGG 165022 |||| ||||| || |||||| | ||||| || || ||||||||||||||| | | | Sbjct 7243066 TTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTG 7243125 Query 165023 ATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTTCCTCATCGGTG 165082 |||| ||||| ||||| ||||||||||| || | |||| | |||||| | | |||| Sbjct 7243126 ATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 7243185 Query 165083 TAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCG 165122 ||||||| || ||||||||||||||||||||| || ||| Sbjct 7243186 TAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 7243225 Score = 123 bits (136), Expect = 3e-23 Identities = 164/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 166428 TGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATT 166487 ||||| ||| | || || || ||| | |||||||||||||| || |||||||| ||||| Sbjct 7261224 TGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATA 7261283 Query 166488 GGTTTCATGCTTCGGCAGTTTGAAATCGCTC-GTCTAGTAGGTATTCGTCCGTACAATGC 166546 ||||||||| | || || |||||| | |||| |||| || | || || || ||||| Sbjct 7261284 GGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCT-GTTCAATTGCGGCCTTATAATGC 7261342 Query 166547 AATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGG 166606 ||| | || ||||| || || ||||| || ||| || || || || || || ||||| Sbjct 7261343 AATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGG 7261402 Query 166607 TCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGCAAT 166651 ||||| ||||||| || || || ||| || || |||| || Sbjct 7261403 GCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq6 Length=27870862 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 165472 GGGTACTTCGGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCAC 165531 || || || || || | || |||||||| || || ||||| || ||||| | ||| Sbjct 8615183 GGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 8615124 Query 165532 TTCTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACC 165591 |||||| | || || ||||||||||| || || |||||||||||| | ||| |||| || Sbjct 8615123 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 8615064 Query 165592 ATGGCATTCAACCTGAA 165608 ||||| ||||| || || Sbjct 8615063 ATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563633899288320