Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq8 589 2e-163 seq2 540 1e-148 seq10 399 2e-106 seq4 179 4e-40 seq12 161 1e-34 seq6 89.7 6e-13 >seq8 Length=25958679 Score = 589 bits (652), Expect = 2e-163 Identities = 728/992 (73%), Gaps = 29/992 (3%) Strand=Plus/Plus Query 160876 TTTTGTAACTGGGTCACCAGCACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTG 160935 || || |||||| | || |||||||| ||||| ||||| | || |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 160936 ATGATTCCCTGCTTGCTCG-CTGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTC 160993 || || |||| | | ||| | || || ||||| || || || |||||| | ||| | Sbjct 20127872 ATAAT-CCCTACCTTATCGACCGCAACT-TTTGTATTTATTATCGCCTTCATCACTGCCC 20127929 Query 160994 CCCCTGTGGACATCGACGGCATTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 161053 | | |||||| | || |||||| | | || ||||||| Sbjct 20127930 CTC-------------------TCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACA 20127970 Query 161054 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 161113 | || ||||||||||| |||| ||| ||||| || ||||| ||||||| ||||| | Sbjct 20127971 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 20128030 Query 161114 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 161173 | |||||||| ||| | | || || ||| | ||||| || ||||||| | || ||| Sbjct 20128031 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 20128090 Query 161174 TGTTCCACTTCCTGATTGGCATCTATGCTT---ACATGGGTCGTGAGTGGGAACTTTCTT 161230 | | |||||| | |||| | || |||| | |||||||||||||||||||| || Sbjct 20128091 TTCTACACTTCTTACTTGG--TGTA-GCTTGTCATATGGGTCGTGAGTGGGAACTGAGTT 20128147 Query 161231 ACCGTCTGGGAATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGA 161290 ||||||||| ||||||||||||||| || ||||| || |||||||| || || || | Sbjct 20128148 TCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTA 20128207 Query 161291 GTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGG 161350 ||| || ||| || || ||| | |||||||| ||||||||||| |||||| | | Sbjct 20128208 CTGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAG 20128267 Query 161351 GCATCTCTGGTACGTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGC 161410 | || |||||||| ||||||| ||| |||| ||||| |||||||| ||||| || |||| Sbjct 20128268 GAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGC 20128327 Query 161411 ACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGC 161470 | || || || ||| | || ||||| ||||| || |||||||| || |||||||| |||| Sbjct 20128328 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGC 20128387 Query 161471 ACGGTTCGCTGGTTACCTCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACT 161530 | ||||| |||| |||||| || | | |||||||| |||||||| || || Sbjct 20128388 ATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATG 20128447 Query 161531 ATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACT 161590 | ||||||| || |||||||| |||||||| || || || || || || || || || | Sbjct 20128448 AGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATT 20128507 Query 161591 TCGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCC 161650 | || || | || |||||||| ||| || |||||||| || ||| | ||||||||| Sbjct 20128508 TTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCT 20128567 Query 161651 TTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCAT 161710 | | ||||||||||| || || || ||||||||||| | || | || || ||||| | Sbjct 20128568 TGGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTT 20128627 Query 161711 TCAACCTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCA 161770 |||| || || || ||||| |||||||| ||| | |||||||| || ||| ||||| | Sbjct 20128628 TCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTA 20128687 Query 161771 ACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCA 161830 | || ||||| || | ||||||||||| |||||| |||||||| |||||||| || | Sbjct 20128688 ATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTA 20128747 Query 161831 ATGCTCACAACTTCCCTCTTGACCTTGCTGCT 161862 ||||||||||||||||||| ||||| |||||| Sbjct 20128748 ATGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 157691 GGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAAT 157750 ||| |||||||||||||||||||||| ||| |||||| ||| | ||| ||||||| ||| Sbjct 8231913 GGGATGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACAGGTTCAAAT 8231972 Query 157751 CCTGTCACCCCGACTTAT 157768 ||||||| ||| || ||| Sbjct 8231973 CCTGTCATCCCTACCTAT 8231990 >seq2 Length=33962743 Score = 540 bits (598), Expect = 1e-148 Identities = 733/1016 (72%), Gaps = 6/1016 (1%) Strand=Plus/Minus Query 162117 TTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGGTCTGGA 162176 |||||| | | ||||||||| | ||| |||||||| |||||||| || |||||||| Sbjct 13366837 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 13366778 Query 162177 CTTCTTCTTTTTCCCACTGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGACTACTTTC 162236 || | |||||||| ||||||| | ||| | || |||||| |||| ||||| ||||| Sbjct 13366777 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 13366718 Query 162237 GTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT-GCAAACTTTCT 162295 || || ||||||||| || ||| | |||||||||||| | || ||| |||| ||||| Sbjct 13366717 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCT 13366660 Query 162296 TA-CTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCTATGGG 162354 || | | |||||||| | || || | | | | || ||| | |||| ||||||| Sbjct 13366659 TAACCGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGG 13366600 Query 162355 GTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGACTTTTG 162414 | || || | |||||||| || | || ||||| ||| | || || || |||||||||| Sbjct 13366599 GCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTG 13366540 Query 162415 TGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC 162474 | || ||||| || || |||||||| |||||||||||| | || || |||||||| || | Sbjct 13366539 TTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTC 13366480 Query 162475 GA-CTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGTATTC 162533 || || || | | | ||||| ||||| ||| | ||||| || || |||||||| || Sbjct 13366479 GATCTGTTCAATTGTGG-CCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTT 13366421 Query 162534 GTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTC 162593 ||| || || | || ||||| |||| ||||| |||||||| || ||| || Sbjct 13366420 GTTTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTT 13366361 Query 162594 GGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTA 162653 || || ||||| || || |||||| | |||||| ||||||| || ||||| |||||| | Sbjct 13366360 GGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTG 13366301 Query 162654 AATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGCTATT 162713 || || ||||| |||||||| || || || | | || | || |||| | |||||| Sbjct 13366300 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATT 13366241 Query 162714 CATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTTTAAA 162773 ||||| | || || ||||| || || | || || || || |||| || ||| Sbjct 13366240 CATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGC 13366181 Query 162774 GCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTTCTGG 162833 | ||| || | || || | ||||| || ||||| ||||| || || || ||||| ||| Sbjct 13366180 ACTTTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGG 13366121 Query 162834 TCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCTCTTT 162893 || || || || ||| |||||||| || || |||||||| |||||||||||||| ||| Sbjct 13366120 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 13366061 Query 162894 GTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAATCTT 162953 || || |||| ||| | |||| ||| |||| || | | || || ||||| || || Sbjct 13366060 GTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTA 13366001 Query 162954 CGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGAGACG 163013 | ||| || ||||| || || || ||| | ||||| || ||||| ||||| |||||||| Sbjct 13366000 CTTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 13365941 Query 163014 TTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGTGGAC 163073 ||||| || || || |||||| | || | || |||| || ||| | ||| | ||| Sbjct 13365940 TTCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGAT 13365881 Query 163074 CAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 || |||||||| || || | |||||||| ||||| ||| | || |||||||| Sbjct 13365880 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT 13365825 Score = 167 bits (184), Expect = 3e-36 Identities = 233/327 (71%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 162650 GCTAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGC 162709 |||| |||| ||||| |||||||| || || || | | || | || |||| | || Sbjct 18364934 GCTAGATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGC 18364993 Query 162710 TATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTT 162769 ||||||||| | || || ||||| || || | || || || || ||||| || || Sbjct 18364994 TATTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTT 18365053 Query 162770 TAAAGCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTT 162829 || ||| || | || || | |||||||| ||||| ||||| || || || ||||| Sbjct 18365054 CCGCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTT 18365113 Query 162830 CTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCT 162889 ||||| || || || ||| |||||||| || || |||||||| |||||||||||||| Sbjct 18365114 TTGGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCT 18365173 Query 162890 CTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAA 162949 ||||| || |||| ||| | |||| ||| |||| || | | || || ||||| || Sbjct 18365174 ATTTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAA 18365233 Query 162950 TCTTCGTGCTTACGACTTTGTATCTCA 162976 || ||||| || ||||| || || || Sbjct 18365234 CCTACGTGCCTATGACTTCGTTTCCCA 18365260 Score = 120 bits (132), Expect = 3e-22 Identities = 128/168 (76%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 161674 ATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTC 161733 || ||||||||||| | || | || || ||||| ||||| || ||||| ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 161734 AACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAAC 161793 ||||| ||| | |||||||| || ||| ||||| | || ||||| || | ||||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 161794 CGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAAC 161841 ||||| ||||| |||||||| |||||||| || ||||||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 399 bits (442), Expect = 2e-106 Identities = 453/608 (75%), Gaps = 11/608 (2%) Strand=Plus/Plus Query 161256 TTGC-GTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTT 161314 |||| || ||||| || |||||||| || || || | ||| || ||| || | || ||| Sbjct 18975647 TTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTA 18975706 Query 161315 TCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACA 161374 | |||||||| ||||| ||||| |||||| | || || |||||||| ||||||| | Sbjct 18975707 TTGGTCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTA 18975766 Query 161375 TGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAG 161434 || |||| ||||| ||||| || ||||| || ||||| | || || ||| | || |||| Sbjct 18975767 TGATTGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAG 18975826 Query 161435 CAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGC 161494 | ||||| || |||||||| || || ||||| ||||| ||||| |||| |||||| Sbjct 18975827 CTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTT 18975886 Query 161495 TGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAG 161554 || | | |||||||| |||||||| || || | ||||||| || |||||||| | Sbjct 18975887 TGATCGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGG 18975946 Query 161555 AAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACG 161614 ||||||| || || || || || || || || || || || || | || |||||||| | Sbjct 18975947 AAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATG 18976006 Query 161615 CTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCA 161674 || || |||||||| || || | ||||||||| | |||||||||||||| || || | Sbjct 18976007 CTAGTTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGA 18976066 Query 161675 TCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCA 161734 | ||||||| ||| | || | || || ||||| ||||| || || || ||||| |||| Sbjct 18976067 TTTGGTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCA 18976126 Query 161735 ACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACC 161794 |||| | | | |||||||| || || || || ||||| || | |||||| Sbjct 18976127 ACCAATATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACC 18976176 Query 161795 GTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACC 161854 ||||| |||||| |||||||| |||||||| || |||||||||||||||||||| |||| Sbjct 18976177 GTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACC 18976236 Query 161855 TTGCTGCT 161862 | |||||| Sbjct 18976237 TAGCTGCT 18976244 Score = 172 bits (190), Expect = 6e-38 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 161308 TATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTC 161367 || ||| | |||||||| ||||||||||| |||||| | || || |||||||| ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 161368 AACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTC 161427 |||| ||| |||| ||||| |||||||| ||||| || ||||| || || || ||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 161428 GGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACC 161487 || ||||| ||||| || |||||||| || |||||||| ||||| ||||| |||| ||| Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 161488 TCTTCGCTGGTTCGTGAAACCACCGAAAACGAGTC 161522 ||| || | | |||||||| |||||||| || Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAAACGAATC 9553442 >seq4 Length=30521686 Score = 179 bits (198), Expect = 4e-40 Identities = 223/303 (74%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 162381 CGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTT 162440 || ||||| ||| | || || || ||||||||||| || ||||| || || |||||||| Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 162441 ATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC-GACTTATCGGTATTCGTCCTTACAA 162499 |||||||||||| | | || |||||||| | | | || || | | || ||||| || Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAA 19658402 Query 162500 TGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTT 162559 ||| ||| | ||||| || || || ||| | || ||| || || || || ||||| | Sbjct 19658401 TGCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACT 19658342 Query 162560 GGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCT 162619 ||| ||||| |||||||| || ||| || || || ||||| || || |||||| | Sbjct 19658341 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCAT 19658282 Query 162620 GCTCTTCCTCCAAGGGTTCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGC 162679 |||||| ||||||| || ||||| |||||| | || || ||||| |||||||| || || Sbjct 19658281 CCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGC 19658222 Query 162680 AGG 162682 || Sbjct 19658221 CGG 19658219 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 162381 CGCTGGTGCCAACTTGGGGGACTCTGGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTT 162440 || ||||| ||| | || || || ||||||||||| || ||||| || || |||||||| Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 162441 ATAGGTTTCATGCTTCGCCAGTTTGAACTGGCAC-GACTTATCGGTATTCGTCCTTACAA 162499 |||||||||||| | || || |||||||| || | | || || | | || ||||| || Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAA 7261339 Query 162500 TGCTATTGCTTTCTCAGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTT 162559 ||| ||| | ||||| || || || ||||| || ||| || || || || ||||| | Sbjct 7261340 TGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACT 7261399 Query 162560 GGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAAT 162607 ||| ||||| |||||||| || ||| || || || ||||| || Sbjct 7261400 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 161073 TATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGCAGCAAGTCT 161132 ||| ||| ||||| || ||||| ||||||| ||||| || |||||||| ||| | | Sbjct 7243064 TATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGT 7243123 Query 161133 GGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTGTTCCACTTCCTGATTGG 161192 || || ||| | ||||| |||||||||| | || |||| | |||||| | |||| Sbjct 7243124 TGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGG 7243183 Query 161193 CATCTATGCTTACATGGGTCGTGAGTGGGAACT 161225 | | ||| |||||||||||||||||||| Sbjct 7243184 TGTAGCTTGTTATATGGGTCGTGAGTGGGAACT 7243216 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 158341 TACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGAACTCAATTACTCGTGCCGTGCAGGC 158400 |||||||| ||||| || |||||||| || ||||| || ||||||||||| || ||| Sbjct 16619561 TACATCCTGGACGCGGCCGAGGAAGCCGGCGTCGACCTGCCCTACTCGTGCCGCGCCGGC 16619620 Query 158401 GCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGGCACCGTAGACCAAAGCGACCAGTCC 158460 || || || | || || || || ||||| ||| ||| ||||| |||||||| Sbjct 16619621 GCGTGCTCCACCTGCGCCGGCAAGGTCGTCGAGGGCGGCGTCGACCAGTCGGACCAGTCG 16619680 Query 158461 TTCCTGGACGATGACCA 158477 ||||| ||||| | ||| Sbjct 16619681 TTCCTCGACGACGCCCA 16619697 >seq12 Length=23561512 Score = 161 bits (178), Expect = 1e-34 Identities = 160/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 161656 GCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAAC 161715 ||||||||||| || || || ||||||||||| | || | || || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 161716 CTGAATGGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACC 161775 || || || ||||| |||||| | ||| | |||||||| || ||| ||||| || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 161776 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCT 161835 ||||| || | |||| |||||| |||||| |||| ||| || ||||| || ||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 161836 CACAACTTCCCTCTTGACCTTGCTGCT 161862 |||||||||||||| ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157694 GTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAATCCT 157753 ||||||||||||||||||||||| ||| |||||| ||| | ||| | ||||| |||||| Sbjct 11432009 GTGTAGCGCAGCTTGGTAGCGCGTTTGTTTTGGGTACAAAATGTCACGGGTTCAAATCCT 11431950 Query 157754 GTCACCCCGACTTAT 157768 |||| ||| || ||| Sbjct 11431949 GTCATCCCTACCTAT 11431935 >seq6 Length=27870862 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 161584 GGGTACTTCGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCAC 161643 || || || || || | || |||||||| ||| || |||||||| || || | ||| Sbjct 8615183 GGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 8615124 Query 161644 TTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACC 161703 |||||| | |||||||||||||| || || || ||||||||||| | || | || || Sbjct 8615123 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 8615064 Query 161704 ATGGCATTCAACCTGAA 161720 ||||| ||||| || || Sbjct 8615063 ATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547721058764880