Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq2 517 1e-141 seq8 475 5e-129 seq10 327 2e-84 seq4 221 2e-52 seq12 159 5e-34 seq6 105 9e-18 >seq2 Length=33962743 Score = 517 bits (572), Expect = 1e-141 Identities = 686/947 (72%), Gaps = 4/947 (0%) Strand=Plus/Plus Query 23459 CATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTGTAGAAGGTCTCATACGA 23518 |||||| |||| | || ||||| || | ||||||||| |||||||| |||||| | Sbjct 13365893 CATCCACGCACGAATACCCTTGTTTAAAAGAATATTTTTGGTGTAGAAAGTCTCAAATTC 13365952 Query 23519 ACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGC 23578 | |||||| || ||||| || || || || || ||||| ||| | || || ||||| Sbjct 13365953 AGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAAGTAGGTTCAGAGC 13366012 Query 23579 AAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACAGGAACAAACAACATAAA 23638 || || | | |||||||| | | ||| | ||| |||| || ||||| | |||||| Sbjct 13366013 CAGGCCGACTACGCCAATAGCACTCATCCATAAACCGGTGACCGGTACAAATAGCATAAA 13366072 Query 23639 GAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATT 23698 ||| || |||||||| |||||| ||| ||||| || |||||||| |||||||| ||||| Sbjct 13366073 GAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGGACCAAAAGCGATT 13366132 Query 23699 TGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGTGTT 23758 || || ||||| ||||| || || || | ||||| | | || | ||| || || Sbjct 13366133 AGCGGTGACCATTGAATAAGTGTCTTCAGCTTGAGTTGGGTTAAAAGTGCGAAAGGTATT 13366192 Query 23759 TGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAG 23818 || || || || ||| | || || || || || || | ||||||||||| | || Sbjct 13366193 TGTACCATCACCGTCCTCAAATAGAGTGTTTTCCACGGTTGCCCCATGAATAGCGCATAG 13366252 Query 23819 AAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTT 23878 || || | || | || || ||||||||||||||||| || ||||| | |||||| || Sbjct 13366253 CAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATT 13366312 Query 23879 ATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGC 23938 |||||| || |||| |||||| | ||| | || ||||| || || || ||||||||||| Sbjct 13366313 ATGAAATCCTTGGAAGAAGAGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGC 13366372 Query 23939 AAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAAT 23998 |||||||||| || || |||| ||||| || ||||||| || || || |||||||| Sbjct 13366373 AAAGAACCAACCGGATTGCCCCAGTGGATAAATCGGGAATACGGAAACAAAAACAGCAAT 13366432 Query 23999 AGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAA 24057 || ||||| || | ||| ||||| || || | | | || ||| || || ||||||| Sbjct 13366433 TGGGCCAGAGAATGAAATTGCATTATAAGGCCACAATTGAAC-AGATCGAGCAAGTTCAA 13366491 Query 24058 ACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAAA 24117 | ||||||||||| |||||||| |||||||| || || |||||||||||||| | ||| | Sbjct 13366492 ATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGCAACAAAAGTCCATA 13366551 Query 24118 GCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCAGGACCCCAAAGTAGAA 24177 | || || | ||| ||| || ||| |||||||| | || || ||||| ||||| | Sbjct 13366552 GACCACCTAATTGACACCAACGAGTAAAATCCCCTTGTGCTTCCGGGCCCCATAGTAGCA 13366611 Query 24178 GAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCCG-TAAGAAAGTTAGCA 24236 | ||| || | | | | ||||| | || || ||| | | ||||||| || | Sbjct 13366612 ACAAAGAGTGTGCTAAACTATTGGCAGGGGGGGAAACTGCTACGGTTAAGAAA-TTGCAA 13366670 Query 24237 CCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTAACAAAAGCTGTGCCA 24296 || || | ||||||||| || | ||||||||| |||||| || ||||||| ||| || Sbjct 13366671 CCTTCCAAATAGGAACTCGCCAATCCATGGGTATACCAAGAAGTTACAAAAGTTGTCCCT 13366730 Query 24297 GTAAGCCAACCGCCAATGGCAAGATAAGCAGTGGGAAGAAGTAGGAGTCCAGACCAACCC 24356 |||| |||||| || | || | ||||||| |||| ||| | || |||||||| || Sbjct 13366731 GTAAACCAACCTCCTAAAGCGAAATAAGCACAAGGAAAAAGCAATAGGCCAGACCATCCT 13366790 Query 24357 ACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTCAAA 24403 ||||| ||||| || |||| | | ||||||||||| || ||||| Sbjct 13366791 ACAAAAACAAAACGGTCCCTTCGTAACCAGTCGTCCATAATATCAAA 13366837 Score = 165 bits (182), Expect = 1e-35 Identities = 225/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 23550 ACAAAATCATAAGCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAA 23609 || || ||||| ||||| || || ||||| || || | | |||||||| | | ||| Sbjct 18365254 ACGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCGACTACGCCAATAGCACTCATCCAT 18365195 Query 23610 AGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCA 23669 | ||| |||| || ||||| | ||||||||| || |||||||| |||||| ||| ||| Sbjct 18365194 AAACCGGTGACCGGTACAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCA 18365135 Query 23670 ACCCCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCC 23729 || || |||||||| |||||||| ||||| || || ||||| ||||| || || || | Sbjct 18365134 ACACCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTCTTCAGCT 18365075 Query 23730 TGAGTGGAATCGAACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTC 23789 ||||| | | || || || || ||||| || || || ||| | || || || Sbjct 18365074 TGAGTTGGGTTAAAAGCGCGGAAGGTATTTGCACCATCACCGTCCTCAAATAGAGTGTTT 18365015 Query 23790 TCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCC 23849 || || || | ||||||||||| | || || || | || | || || ||||||||| Sbjct 18365014 TCCACGGTTGCCCCATGAATAGCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCC 18364955 Query 23850 ATCATATGGAAGGG 23863 |||||||| || || Sbjct 18364954 ATCATATGAAATGG 18364941 >seq8 Length=25958679 Score = 475 bits (526), Expect = 5e-129 Identities = 617/850 (73%), Gaps = 6/850 (1%) Strand=Plus/Minus Query 26730 AGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAG 26789 |||||| || || | || || || || || || | |||||| || || || | ||||| Sbjct 20128779 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 20128720 Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849 | ||||||||||| | || |||||||| || | || ||||| || ||||| || Sbjct 20128719 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 20128660 Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909 ||| || ||||| ||||| ||||| |||||||||||||| || | ||| | || || Sbjct 20128659 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 20128600 Query 26910 GAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTT 26969 |||||| || || || || ||||| || | | ||||||||| || ||||| |||||||| Sbjct 20128599 GAACCAAATCCCTACTACAGGCCAAGCTACCAAGAAGAAGTGTAACGAACGAGAGTTGTT 20128540 Query 26970 GAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTA 27029 || ||||||||||||||| || || || || || ||||| || || || || || || Sbjct 20128539 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 20128480 Query 27030 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTC 27089 |||||||| |||||||| || | ||||| | || || || ||||||| || || Sbjct 20128479 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 20128420 Query 27090 ACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAA 27149 | || | ||| || |||| || ||||||||| ||| || || || ||||| Sbjct 20128419 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 20128360 Query 27150 TACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAA 27209 ||| ||||| ||||| | |||||| || || ||||||||||| || || ||||||||||| Sbjct 20128359 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAA 20128300 Query 27210 TACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACC 27269 ||||| ||| |||| ||||||||||| || || | ||||||| |||| |||||| || Sbjct 20128299 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 20128240 Query 27270 TTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGC 27329 |||||| | ||| || | ||| || ||| | ||||| || || ||||| |||||||| Sbjct 20128239 TTGACCAATAGGGTAATTCAAGAAAACAGCAGTAGCAGCCGCAACAGGAGCTGAATATGC 20128180 Query 27330 TACACAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATAT- 27388 ||| ||||| ||||||||||| | ||| | |||||||||||||| ||||||| Sbjct 20128179 AACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCATATG 20128120 Query 27389 --AAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATA 27446 |||| || | || | | |||||| | || | || | ||||||| || || || Sbjct 20128119 ACAAGC-TACA--CCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTA 20128063 Query 27447 CAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATT 27506 ||||||||||| | ||||| |||||||| |||||||| ||||| | ||||| || Sbjct 20128062 TAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGC 20128003 Query 27507 TGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAAC 27566 ||| | || | || |||||||| || || ||||| || || | | |||||| ||| Sbjct 20128002 AGAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAAAACCAGAAAC 20127943 Query 27567 GGGTTCACGA 27576 | |||||| Sbjct 20127942 ATGCTCACGA 20127933 >seq10 Length=20731201 Score = 327 bits (362), Expect = 2e-84 Identities = 434/604 (72%), Gaps = 10/604 (2%) Strand=Plus/Minus Query 26730 AGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAG 26789 |||||| || || | || || || || || || | |||||| || || || | ||||| Sbjct 18976244 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 18976185 Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849 | ||||||||||| | || |||||||| || | || ||||| || Sbjct 18976184 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAAT----------TGGCTATCAACTAC 18976135 Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909 | | || ||||| ||||| ||||| |||||||||||||| || | ||| | || | Sbjct 18976134 ATATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAAT 18976075 Query 26910 GAACCAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTT 26969 |||||| || || || || ||||| ||||| | ||||||||| || || || |||||||| Sbjct 18976074 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGATCGAGAGTTGTT 18976015 Query 26970 GAATGAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTA 27029 || ||||||||||||||| || || || || || ||||| || || || || || || Sbjct 18976014 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 18975955 Query 27030 GGTCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTC 27089 |||||||| |||||||| || | ||||| | || || || ||||||| || || Sbjct 18975954 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 18975895 Query 27090 ACGGACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAA 27149 | || | ||| || |||| || ||||||||| || || || || ||||| Sbjct 18975894 CCCGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTAAATAGGGAACCGCCGAA 18975835 Query 27150 TACCCCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAA 27209 ||| ||||| ||||| | |||||| || | ||||||||||| || || ||||||||||| Sbjct 18975834 TACACCAGCTACACCTAACATGTGAAATAGATGCATAAGGATGTTATGATCTGCCTGGAA 18975775 Query 27210 TACAAGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACC 27269 ||||| ||| |||| ||||||||||| || || | ||||||| |||| ||||| || Sbjct 18975774 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAAAGAAACTTCC 18975715 Query 27270 TTGACCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGC 27329 |||||| | ||| || | | ||| || ||| | ||||| || || ||||| |||||||| Sbjct 18975714 TTGACCAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 18975655 Query 27330 TACA 27333 ||| Sbjct 18975654 AACA 18975651 Score = 152 bits (168), Expect = 7e-32 Identities = 134/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 27118 CCGTGCATAGCAGAGAAAAGAGATCCACCGAATACCCCAGCAACACCGAGCATGTGGAAC 27177 || ||||||||| ||| || || || |||||||| ||||| ||||| | |||||| || Sbjct 9553490 CCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGCTACACCTAACATGTGAAAT 9553549 Query 27178 GGGTGCATAAGGATATTGTGTTCTGCCTGGAATACAAGCATGTAGTTAAAAGTACCAGAG 27237 || ||||||||||| || || |||||||||||||||| ||| |||| ||||||||||| Sbjct 9553550 GGATGCATAAGGATGTTATGCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGAT 9553609 Query 27238 ATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGACCGAAAGGATA 27284 || || | ||||||| |||| |||||| |||||||| | ||| || Sbjct 9553610 ATTCCTAAAGGCATACCATCAGAGAAACTTCCTTGACCAATAGGGTA 9553656 >seq4 Length=30521686 Score = 221 bits (244), Expect = 2e-52 Identities = 227/294 (77%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 23838 CCAGCAACTCCCATCATATGGAAGGGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAG 23897 || ||||||||||||||||| || ||||| | |||||| |||||||| || |||| |||| Sbjct 19658219 CCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAG 19658278 Query 23898 AGAAGGAACCTGAAAATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGT 23957 || | ||| | || ||||| || || || ||||||||||||||||||||| || || Sbjct 19658279 AGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGC 19658338 Query 23958 CCCAAAGGATAGATGAGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATC 24017 |||| ||||| || |||||||| || || || | ||| || || ||||| || | ||| Sbjct 19658339 CCCAGTGGATAAATCAGGAATACGGAAACAAAAATAGCGATTGGGCCAGAGAATGAAATT 19658398 Query 24018 GCATTGTAGGGACGGATTCCAATTAGA-CGTGCCAGTTCAAACTGACGTAACATAAAACC 24076 ||||| || || || | | || ||| || | |||||||| |||| |||||| ||||| Sbjct 19658399 GCATTATAAGGCCGCAATTGAA-CAGACCGAGTAAGTTCAAATTGACATAACATGAAACC 19658457 Query 24077 TATAAGTGCAAAGGCACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTG 24130 ||| |||||||| || || |||||||||||||| | ||| || || || | ||| Sbjct 19658458 TATTAGTGCAAAAGCCCCATGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 19658511 Score = 167 bits (184), Expect = 3e-36 Identities = 170/219 (78%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 23913 ATCGCCGCAACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATG 23972 ||||| || || || ||||||||||||||||||||| || || |||| ||||| || Sbjct 7261447 ATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGGATAAATC 7261388 Query 23973 AGGAATACAGACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGG 24032 |||||||| || || || ||||| || || ||||| || | ||| ||||| || || || Sbjct 7261387 AGGAATACGGAAACAAAAACAGCGATTGGGCCAGAGAATGAAATTGCATTATAAGGCCGC 7261328 Query 24033 ATTCCAATTAGAC-GTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGC 24091 | | || |||| | || |||||||| ||||||||||| |||||||| |||||||| || Sbjct 7261327 AATTGAAC-AGACCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGC 7261269 Query 24092 ACCGTGGAGAGCAACAAAGGACCAAAGCCCTCCAAGTTG 24130 || |||||||||||||| | ||| || || || | ||| Sbjct 7261268 CCCATGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 7261230 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 27367 AGTTCCCACTCACGTCCCATATAAGCATAGATGCCGATAAGGAAGTGGAAGACTACCAGT 27426 |||||||||||||| ||||||||| | | || | | |||||| | || | || Sbjct 7243216 AGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGC 7243157 Query 27427 TGGAAAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAG 27486 | |||||||||| || || ||||||||||| | ||||| |||||||| |||||||| Sbjct 7243156 TCATAAGGACCACCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAA 7243097 Query 27487 AAGTGGAGACCGATTGC 27503 ||||| | ||||| || Sbjct 7243096 AAGTGCAATCCGATCGC 7243080 >seq12 Length=23561512 Score = 159 bits (176), Expect = 5e-34 Identities = 193/260 (74%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 27431 AAGGACCACCGTTATACAACCACTCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGT 27490 ||||||| || || || ||||||||||| | ||||| |||||||| |||| ||| |||| Sbjct 9700600 AAGGACCGCCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGAGTAAAAGT 9700541 Query 27491 GGAGACCGATTGCATTTGAACTTGGGACAACTGCACCAGAAATGATGTTGTTGCCATACA 27550 | | ||||| ||| | ||| | || | || | |||||| || || ||||| || || | Sbjct 9700540 GCAATCCGATCGCAGTAGAAGTAGGAATAATGGTACCAGAGATAATATTGTTTCCGTAAA 9700481 Query 27551 TAAGTGAACCAGCAACGGGTTCACGAATACCGTCAATATCGACGGGTGGTGCTGCGATGA 27610 | |||||| ||| | ||||||||||| |||||||| | || || || ||||||| Sbjct 9700480 GTAAAAAACCAGAAACATGCTCACGAATACCATCAATATCTGCTGGAGGGGCAGCGATGA 9700421 Query 27611 ATGCGACAATGAA-GCAGACAGTTGCTGCTAACAGTGTTGGGATCATCAGTACACCGAAC 27669 | |||| ||| || |||| |||||| | || | || |||||||||| ||||| ||| Sbjct 9700420 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAAC 9700362 Query 27670 CAACCAACATACAAACGGTT 27689 || |||| || | |||||| Sbjct 9700361 CATCCAATGTAAAGACGGTT 9700342 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 26730 AGCAGCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAG 26789 |||||| || || | || || || || | || | |||||| || || | | ||||| Sbjct 9700937 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGTATTACGTTCGTGTATTACTCCCATACCAAG 9700878 Query 26790 ACCAGCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCAC 26849 | |||||| |||| | || |||||||| || | || ||||| || ||||| || Sbjct 9700877 ATTAGCACGATTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 9700818 Query 26850 AGACTGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGT 26909 ||| | ||||| ||||| ||||| |||||||||||||| || | ||| | || || Sbjct 9700817 AGATTAGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 9700758 Query 26910 GAACCAGATGCCAACAACGGGCCATGC 26936 |||||| || || || || ||||| || Sbjct 9700757 GAACCAAATCCCTACTACAGGCCAAGC 9700731 >seq6 Length=27870862 Score = 105 bits (116), Expect = 9e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 26872 TTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAACCAGATGCCAACAACGGGC 26931 || |||||||||||||| || | ||| | || |||||||| || || || || ||| Sbjct 8615047 TTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAAATCCCTACTACAGGC 8615106 Query 26932 CATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAATGAAGCATATTGGAAGATC 26991 || ||||| | ||||||||| || ||||| |||||||| || ||||||||||||||| Sbjct 8615107 CAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAAACTAGCATATTGGAAGATT 8615166 Query 26992 AAACGACCGAAGTAGCCA 27009 || || || || || ||| Sbjct 8615167 AATCGGCCCAAATAACCA 8615184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665462639279760