Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq2 500 1e-136 seq8 495 4e-135 seq10 327 1e-84 seq4 185 1e-41 seq12 140 4e-28 seq6 91.5 2e-13 seq1 89.7 6e-13 >seq2 Length=33962743 Score = 500 bits (554), Expect = 1e-136 Identities = 728/1022 (71%), Gaps = 10/1022 (1%) Strand=Plus/Minus Query 167014 TTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGGTCTGGA 167073 |||||| | | || |||||| | |||||| |||||||||||||| || |||||||| Sbjct 13366837 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 13366778 Query 167074 CTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTTC 167133 || | |||||||| ||||||| | ||| | || |||||| |||| ||||| ||||| Sbjct 13366777 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 13366718 Query 167134 GTCACGAGTTGGTATACTCATGGACTCGCGTCCAGTT---ATCTTGAGGGTGCGAACTTT 167190 || || ||||||||| |||||| | ||| |||| || | || ||| || ||| Sbjct 13366717 GTAACTTCTTGGTATACCCATGGATTGGCG---AGTTCCTATTTGGAAGGTTGCAA-TTT 13366662 Query 167191 CTTA-CTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTTCTATG 167249 |||| | | |||||| | || || || | | | || ||||| | || ||||| Sbjct 13366661 CTTAACCGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATG 13366602 Query 167250 GGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGGGCTTT 167309 ||| || ||| | ||||||||||| | ||| ||| | || || || ||| |||| Sbjct 13366601 GGGCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTT 13366542 Query 167310 TGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGC 167369 ||| || ||||| || || ||||| || || ||||||||| | || || ||||||||||| Sbjct 13366541 TGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGC 13366482 Query 167370 TCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGTCT 167428 ||| ||| | | | | || || ||||| ||| | |||||||| || |||||||| | Sbjct 13366481 TCGATCTGTTCAAT-TGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTT 13366423 Query 167429 TCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCGTCCT 167488 | ||| ||| |||| | ||||| || || ||| | | ||||||||||| ||| | Sbjct 13366422 TTGTTTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTT 13366363 Query 167489 TCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGGACAC 167548 | || || || || || || |||||| |||||||| |||||||||| || || ||||| Sbjct 13366362 TTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGT 13366303 Query 167549 TGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAA 167608 |||| ||||||||||||||||| || || || | | || | || |||| | || | Sbjct 13366302 TGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTA 13366243 Query 167609 TCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTA 167668 | ||||| | || || || || ||| | | ||| || ||||| |||| || ||| Sbjct 13366242 TTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTC 13366183 Query 167669 AGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCT 167728 | || | | ||||| | ||||| |||||||||||||| || || || || || | Sbjct 13366182 GCACTTTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTT 13366123 Query 167729 GGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTAT 167788 |||| || ||||| || ||||||| ||| ||||| ||| | |||||||||||| ||| Sbjct 13366122 GGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTAT 13366063 Query 167789 TCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATC 167848 | || || || | || | |||| | |||||| | | || |||||||| || | Sbjct 13366062 TTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACC 13366003 Query 167849 TTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTTGAAA 167908 | | ||| || || |||||||| || || ||| | || ||||| ||||| || ||||| | Sbjct 13366002 TACTTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 13365943 Query 167909 CTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCTATCG 167968 ||||||| || ||||| || ||| | || | ||| |||| || ||| | ||| || | Sbjct 13365942 CTTTCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGG 13365883 Query 167969 ATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCACTAT 168028 |||| |||||||| || || | ||||| ||||| |||| ||||| || ||||| || | Sbjct 13365882 ATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCTTT 13365823 Query 168029 AA 168030 || Sbjct 13365822 AA 13365821 Score = 143 bits (158), Expect = 3e-29 Identities = 225/322 (70%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 167552 ATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCTGCAATCC 167611 ||||||||||||||||||| || || || | | || | || |||| | || || | Sbjct 18364939 ATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 18364998 Query 167612 ATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACTTTTAAGG 167671 |||| | || || || || ||| | | ||| || ||||| ||||| || || | Sbjct 18364999 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCG 18365058 Query 167672 CATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGATTCTGGT 167731 | || | | ||||| | ||||| |||||||||||||| || || || || || |||| Sbjct 18365059 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 18365118 Query 167732 CTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATGTTATTCG 167791 | || ||||| || ||||||| ||| ||||| ||| | |||||||||||| |||| | Sbjct 18365119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 18365178 Query 167792 TTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTTAATCTTC 167851 | || || | || | |||| | |||||| | | || |||||||| || || | Sbjct 18365179 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 18365238 Query 167852 GTGCTTACGATTTCGTTTCTCA 167873 |||| || || |||||||| || Sbjct 18365239 GTGCCTATGACTTCGTTTCCCA 18365260 >seq8 Length=25958679 Score = 495 bits (548), Expect = 4e-135 Identities = 704/990 (71%), Gaps = 23/990 (2%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || |||| ||||| ||| | Sbjct 20127811 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTT 20127870 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCC 165887 ||| || || || | | | | |||||| | || || ||||||||||| |||| Sbjct 20127871 GATAATCCCTACCTTATCGACCGCAACTTTTGTATTTATTATCGCCTTCATCACTGC--- 20127927 Query 165888 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACAA 165947 |||| | ||||| | || |||||| | | | || || ||||| Sbjct 20127928 CCCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 20127971 Query 165948 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCAT 166007 || ||||||||||| || |||| |||| || || || | ||||| || || || Sbjct 20127972 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 20128031 Query 166008 CTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTGT 166067 |||||||| ||||| |||| || ||| | || || || ||||||| | || |||| Sbjct 20128032 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 20128091 Query 166068 CTTCCACTTCCTGATTGGCAT--CTATGCCTACATGGGTCGTGAGTGGGAACTGTCTTAC 166125 | |||||| | |||| | || || | | ||||||||||||||||||||| || | Sbjct 20128092 TCTACACTTCTTACTTGGTGTAGCT-TGTC-ATATGGGTCGTGAGTGGGAACTGAGTTTC 20128149 Query 166126 CGTCTAGGTATGCGTCCATGGATCTGTGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGT 166185 ||||| ||||||||||| ||||| |||||| || ||||| || || || ||||| | | Sbjct 20128150 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACT 20128209 Query 166186 GCAGTATTCCTAGTATATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGA 166245 || || ||| | || ||| | |||||||| ||||||||||||| ||||| | ||| Sbjct 20128210 GCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 20128269 Query 166246 ATCTCAGGAACATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCAT 166305 || || || || ||||||| ||| | || ||||| || ||||| || || || |||||| Sbjct 20128270 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCAT 20128329 Query 166306 CCCTTCCATATGCTCGGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCAC 166365 || || || ||| | || || ||||| ||||| || || | || ||||||||||| Sbjct 20128330 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 20128389 Query 166366 GGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTAC 166425 || ||||| || ||| | | | || || || ||||||| |||||| || | Sbjct 20128390 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 20128449 Query 166426 GGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTC 166485 ||||||| || || ||||| ||||| || || || || || |||||||||||||| || Sbjct 20128450 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 20128509 Query 166486 GGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTT 166545 || || || ||||||||||| ||| || |||||||| || || || ||||||||| | Sbjct 20128510 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTTG 20128569 Query 166546 GCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTC 166605 | || |||||||| || || || |||||||| || | || | || ||||| ||| Sbjct 20128570 GTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 20128629 Query 166606 AACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAAC 166665 || || ||||| ||||| |||||||| || | ||||| | || ||||| || | || Sbjct 20128630 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 20128689 Query 166666 ACCTGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAAC 166725 || ||||| ||| | | ||||| ||| ||| ||||||||||| ||||| || ||||| Sbjct 20128690 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 20128749 Query 166726 GCACACAACTTCCCCCTCGACCTCGCTGCT 166755 || ||||||||||| || ||||| |||||| Sbjct 20128750 GCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq10 Length=20731201 Score = 327 bits (362), Expect = 1e-84 Identities = 434/604 (72%), Gaps = 10/604 (2%) Strand=Plus/Plus Query 166152 TGTTGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGG 166211 |||||| || ||||| || || || ||||| | ||| || ||| | | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 166212 TCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTT 166271 |||||| ||||||| ||||| ||||| | ||||| || || || ||||||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 166272 GGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGG 166331 || ||||| || || || || || || ||||||| || || ||| | || || ||||| Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 166332 GGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGT 166391 ||||| || || | |||||||||||||| || ||||| || ||| | | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 166392 TAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGA 166451 | || || ||||||| |||||| || | ||||||| || || ||||| ||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 166452 AACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTC 166511 || || || || || |||||||||||||| || || || || ||||||||||| ||| Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 166512 ATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTG 166571 || |||||||| || || || ||||||||| | ||||| |||||||| || || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 166572 GTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCA 166631 ||||| || | || | || ||||| ||||| || ||||| ||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 166632 GTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGC 166691 | | ||||| | || | || || ||||| ||| | | ||||| || Sbjct 18976131 ATATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACCGTGC 18976180 Query 166692 TGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGC 166751 | ||| ||||||||||| ||||| || ||||| || ||||||||||| || ||||| || Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 18976240 Query 166752 TGCT 166755 |||| Sbjct 18976241 TGCT 18976244 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 166201 TATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTC 166260 || ||| | |||||||| ||||||||||||| ||||| | ||||| || || || ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 166261 AACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTC 166320 |||| ||| | || ||||| || ||||| || || || |||||||| || || ||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 166321 GGCGTTGCTGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACT 166380 || || ||||| ||||| || || | || ||||||||||| || ||||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 166381 TCTTCTCTCGTTAGAGAGACGACTGAAACCGAATC 166415 ||| | | | || || || ||||||| |||||| Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAAACGAATC 9553442 >seq4 Length=30521686 Score = 185 bits (204), Expect = 1e-41 Identities = 219/294 (74%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 167287 CAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTC 167346 ||| | || || || ||| ||||||| || ||||| || || ||||| || || |||||| Sbjct 19658511 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 19658452 Query 167347 ATGCTTCGACAGTTTGAACTTGCTCGC-CTGATTGGTATCCGTCCCTACAATGCTATTGC 167405 ||| | | || ||||||||| |||| ||| | | | || || || ||||| ||| | Sbjct 19658451 ATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTC 19658393 Query 167406 TTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAG 167465 |||||||| || || ||| | || ||| ||| ||||| | ||||| || || ||| Sbjct 19658392 ATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 19658333 Query 167466 CAGCTGGTTCTTTGCCCCGTCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCT 167525 | | ||||||||||| ||| || || || || || || || |||||| |||||||| | Sbjct 19658332 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTT 19658273 Query 167526 CCAAGGATTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGG 167579 ||||||||| || || ||||| |||| ||||||||||||||||| || || || Sbjct 19658272 CCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 19658219 Score = 122 bits (134), Expect = 1e-22 Identities = 148/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 167287 CAACTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTC 167346 ||| | || || || ||| ||||||| || ||||| || || ||||| || || |||||| Sbjct 7261230 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 7261289 Query 167347 ATGCTTCGACAGTTTGAACTTGCTC-GCCTGATTGGTATCCGTCCCTACAATGCTATTGC 167405 ||| | || || ||||||||||||| | ||| || | || || || ||||| ||| | Sbjct 7261290 ATGTTACGTCAATTTGAACTTGCTCGGTCTG-TTCAATTGCGGCCTTATAATGCAATTTC 7261348 Query 167406 TTTCTCTGGTCCTATTGCTGTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAG 167465 |||||||| || || ||||| || ||| ||| ||||| | ||||| || || ||| Sbjct 7261349 ATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 7261408 Query 167466 CAGCTGGTTCTTTGCCCCG 167484 | | ||||||||||| ||| Sbjct 7261409 CGGTTGGTTCTTTGCGCCG 7261427 >seq12 Length=23561512 Score = 140 bits (154), Expect = 4e-28 Identities = 219/311 (70%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 165768 CTTCTGCGAATGGGTTACCAGCACAAATAACCGTCTGTATGTCGGTTGGTTTGGTACGCT 165827 ||||||| | ||| | || ||||| | |||||||| || | || ||||||||| | Sbjct 9700314 CTTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTT 9700373 Query 165828 GATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTC 165886 |||||| || || | ||| | |||||| |||| || || |||||||||||||||| | Sbjct 9700374 GATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCC 9700432 Query 165887 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCTCTGATGTATGGTAACA 165946 | || | || || || || || ||||| | || |||||| | | | || || |||| Sbjct 9700433 CTCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACA 9700492 Query 165947 ACATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTACACTTCTATCCCA 166006 | || ||||||||| | || |||| |||| | || || || | ||||| || | | Sbjct 9700493 ATATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAA 9700552 Query 166007 TCTGGGAAGCCGCATCGCTTGACGAATGGCTCTATAACGGTGGTCCTTTCCAACTGGTTG 166066 | |||||||| ||||| |||| || ||| | || || || ||||||| | || ||| Sbjct 9700553 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 9700612 Query 166067 TCTTCCACTTC 166077 | | |||||| Sbjct 9700613 TTCTACACTTC 9700623 Score = 116 bits (128), Expect = 4e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 166549 GCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAAC 166608 || |||||||| || || || |||||||| || | || | || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 166609 CTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACC 166668 || ||||| ||||| |||||| | || | ||||| | || ||||| || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 166669 TGGGCAGATGTTCTTAACCGCGCTGGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCA 166728 ||||| ||| | | || || ||| ||| ||||||| ||| || || || ||||| | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 166729 CACAACTTCCCCCTCGACCTCGCTGCT 166755 ||||||||||| || ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq6 Length=27870862 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 166476 TGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCA 166535 |||||| || || || || ||||||||||| ||| || |||||||| || || || || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 166536 CTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCAC 166595 ||||||| | ||||| |||||||| || || || |||||||| || | || | || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 166596 GATGGCATTCAACCTGAA 166613 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 >seq1 Length=39866532 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 18120 TCCCTTCATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAG 18179 ||| ||| |||||||||||||||| || ||||| ||| ||||||| || ||||||||| Sbjct 17088744 TCCGTTC-TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAG 17088802 Query 18180 GTTCAAATCCTACCTGGGGAG 18200 |||| |||||||| ||||||| Sbjct 17088803 GTTCGAATCCTACTTGGGGAG 17088823 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 18128 TTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAAT 18187 |||||||||||||||| || ||||| ||| ||||||| || ||||||||||||| ||| Sbjct 22987578 TTCCTCAGTAGCTCAGTGGTAGAGCGGTCGGCTGTTAACTGACTGGTCGTAGGTTCGAAT 22987637 Query 18188 CCTACCTGGGGAG 18200 ||||| ||||||| Sbjct 22987638 CCTACTTGGGGAG 22987650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561221214439200