Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq8 567 8e-157 seq2 515 4e-141 seq10 378 8e-100 seq12 203 4e-47 seq4 203 4e-47 seq6 100 3e-16 seq1 87.8 2e-12 >seq8 Length=25958679 Score = 567 bits (628), Expect = 8e-157 Identities = 722/991 (73%), Gaps = 27/991 (3%) Strand=Plus/Minus Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898 |||||| ||||| |||||||||||||| || ||||| || ||||| ||||||||||| | Sbjct 20128779 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 20128720 Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958 | ||| ||||||| | || ||||| ||| | ||| ||| ||||||| | Sbjct 20128719 ATTAGCACGGTTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 20128660 Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGT 68018 ||| |||||||| ||||| || || || ||||| ||||| || |||| ||| | ||||| Sbjct 20128659 AGATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 20128600 Query 68019 GAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTT 68078 |||||| || || || |||||||| || | | ||||||||| | |||||| |||||||| Sbjct 20128599 GAACCAAATCCCTACTACAGGCCAAGCTACCAAGAAGAAGTGTAACGAACGAGAGTTGTT 20128540 Query 68079 GAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTA 68138 || ||||| |||||||| | || || || || ||||| || || ||||| || || Sbjct 20128539 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 20128480 Query 68139 AGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTC 68198 ||||||||| |||||||| || ||||||| | || || || ||||||||||||| Sbjct 20128479 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 20128420 Query 68199 ACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAA 68258 | | || ||| || |||| |||||||||||| |||||||| || || || || || Sbjct 20128419 CCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAA 20128360 Query 68259 TACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 68318 ||| ||||| || || | ||| || || || ||||| |||||||| |||||||| ||||| Sbjct 20128359 TACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTATGCTCTGCCTGGAA 20128300 Query 68319 CACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACC 68378 || | ||| |||||||||||||||| || || | |||||| | |||||||| || Sbjct 20128299 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAGAGAAACTTCC 20128240 Query 68379 TTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGC 68438 |||||| | ||| || || ||| || || | || || |||||||| || || ||||| Sbjct 20128239 TTGACCAATAGGGTAATTCAAGAAAACAGCAGTAGCAGCCGCAACAGGAGCTGAATATGC 20128180 Query 68439 AACACAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTA 68498 |||| ||||||||||||||||| ||||| | |||||||| ||||| |||| || Sbjct 20128179 AACAGCAATCCAAGGACGCATACCCAGACGGAAACTCAGTTCCCACTCACGACCCA--TA 20128122 Query 68499 TGCAAAG--ATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTAC 68556 || ||| | ||||| | |||||| | | | || | ||||||| |||||||| Sbjct 20128121 TGACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCGCCATTGTAT 20128062 Query 68557 AACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTT 68616 ||||||||||||| | ||| ||||||||||| || |||||||| | || || || Sbjct 20128061 AACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCA 20128002 Query 68617 GAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACA 68676 ||| |||||| || |||||||| || || ||||| || || || | |||||| |||| Sbjct 20128001 GAAGTAGGAATAATGGCACCAGAGATAATATTGTTTCCGTAAAGTAAAAAACCAGAAACA 20127942 Query 68677 GGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACA 68735 | |||||| | || |||| ||||||||||| || || ||| Sbjct 20127941 TGCTCACGA-------------------GAGGGGCAGTGATGAAGGCGATAATAAATACA 20127901 Query 68736 GATGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGC 68794 | ||||| | | | || |||||||| |||| || |||||||| || | |||||| | Sbjct 20127900 -AAAGTTGCGGTCGATAAG-GTAGGGATTATCAAAACACCGAACCATCCGATGTAAAGAC 20127843 Query 68795 GGTTCTCTGTGGAAGTCACCCATTCGCAGAA 68825 |||| || ||| ||| | ||| | |||||| Sbjct 20127842 GGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 20127812 >seq2 Length=33962743 Score = 515 bits (570), Expect = 4e-141 Identities = 722/1008 (72%), Gaps = 4/1008 (0%) Strand=Plus/Plus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || |||| || || ||||||| || |||||||| || | Sbjct 13365820 ATTAAAGAGCGTTTCCACGTGGTTGAACCTCCTCAGGGAATATAAGATTTTCATGAGGCT 13365879 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||| ||||||| ||| | || || ||||| || || ||||||| Sbjct 13365880 GATCCTGAGCTGCCATCCACGCACGAATACCCTTGTTTAAAAGAATATTTTTGGTGTAGA 13365939 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | ||||| || || || ||||| ||||| | ||| || ||||| || |||||||| ||| Sbjct 13365940 AAGTCTCAAATTCAGGATCTTCCGCTGCACGGATTTCCTGGGAAACGAAGTCATAGGCAA 13365999 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| ||||| || || | | || || | ||| |||| | ||| | || || | Sbjct 13366000 GTAGGTTCAGAGCCAGGCCGACTACGCCAATAGCACTCATCCATAAACCGGTGACCGGTA 13366059 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 |||| | |||||||||||| ||||| | |||||| ||| |||| ||||||||| || | Sbjct 13366060 CAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAAAAAGCAACACCAAAGATTTGGG 13366119 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 |||| ||||| || || || |||||||| ||||| ||||| ||||||| | || || | Sbjct 13366120 ACCAAAAGCGATTAGCGGTGACCATTGAATAAGTGTCTTCAGCTTGAGTTGGGTTAAAAG 13366179 Query 66946 CTTTGAAA-GTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCA 67004 | |||| || |||| ||||| || ||| | ||||| || || || || | ||| Sbjct 13366180 -TGCGAAAGGTATTTGTACCATCACCGTCCTCAAATAGAGTGTTTTCCACGGTTGCCCCA 13366238 Query 67005 TGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGG 67064 ||||| || | |||| || | || | | || || || |||||||||||||| ||| Sbjct 13366239 TGAATAGCGCATAGCAGAGCCGCGCCTAATACTCCGGCAACTCCCATCATATGAAATGGG 13366298 Query 67065 TTCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACC 67124 ||||| ||||| ||||| |||||||| | |||||| | ||||||||| || |||| || Sbjct 13366299 TTCAACGTCCAATTATGAAATCCTTGGAAGAAGAGGATGAATCGAAATATCGCTGCTACG 13366358 Query 67125 CCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTA 67184 || ||| || || || ||||||| ||||| ||||| || || || | || || | Sbjct 13366359 CCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGGATAAATCGGGAATACGGAA 13366418 Query 67185 ACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGA 67244 ||||||||||| || || |||||||| | ||| ||||| || || | | | || ||| Sbjct 13366419 ACAAAAACAGCAATTGGGCCAGAGAATGAAATTGCATTATAAGGCCACA-ATTGAACAGA 13366477 Query 67245 -CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGC 67303 || || |||||||| || || | ||||||||| ||||| || |||||||| ||||| || Sbjct 13366478 TCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGCCCCATGGAGAGC 13366537 Query 67304 CACAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGG 67363 |||||| |||| || || || | ||| ||| || |||||||| || | || || Sbjct 13366538 AACAAAAGTCCATAGACCACCTAATTGACACCAACGAGTAAAATCCCCTTGTGCTTCCGG 13366597 Query 67364 ACCCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGT 67423 ||||| ||||| | | ||| || | | | || ||||| | || || || | || Sbjct 13366598 GCCCCATAGTAGCAACAAAGAGTGTGCTAAACTATTGGCAGGGGGGGAAACTGCTACGGT 13366657 Query 67424 GAGAAAATTAGCACCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGAC 67483 | ||||| ||| || | ||| | ||| | ||| || || ||||| || || Sbjct 13366658 TAAGAAATTGCAACCTTCCAAATAGGAACTCGCCAATCCATGGGTATACCAAGAAGTTAC 13366717 Query 67484 AAACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAGTGGGAAAAAGAAGTAG 67543 ||| || || || |||| ||| || || | || | ||||||| |||||||| | ||| Sbjct 13366718 AAAAGTTGTCCCTGTAAACCAACCTCCTAAAGCGAAATAAGCACAAGGAAAAAGCAATAG 13366777 Query 67544 TCCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATC 67591 |||||||| || ||||| ||||| || || | | | |||||| || Sbjct 13366778 GCCAGACCATCCTACAAAAACAAAACGGTCCCTTCGTAACCAGTCGTC 13366825 Score = 185 bits (204), Expect = 1e-41 Identities = 233/320 (73%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 66744 TGGGATACAAAGTCATAAGCACGAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTT 66803 ||||| || |||||||| ||||| ||||| ||||| || || | | || || | ||| Sbjct 18365260 TGGGAAACGAAGTCATAGGCACGTAGGTTCAGAGCCAGGCCGACTACGCCAATAGCACTC 18365201 Query 66804 GTCCAAAGACCCATAACAGGAACAAACAACATAAAGAAATGCAACCACCTCTTATTGCTA 66863 |||| | ||| | || || ||||| | |||||||||||| ||||| | |||||| | Sbjct 18365200 ATCCATAAACCGGTGACCGGTACAAATAGCATAAAGAAATGTAACCAACGTTTATTGGAA 18365141 Query 66864 AACGCAATACCAAAGATCTGAGACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCT 66923 || |||| ||||||||| || ||||| ||||| || || || |||||||| ||||||||| Sbjct 18365140 AAAGCAACACCAAAGATTTGGGACCAAAAGCGATTAGCGGTGACCATTGAATAAGTTTCT 18365081 Query 66924 TCCTCTTGAGTAGAGTCGAATGCTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGA 66983 || ||||||| | || || || ||| || ||||| ||||| || ||| | ||| Sbjct 18365080 TCAGCTTGAGTTGGGTTAAAAGCGCGGAAGGTATTTGCACCATCACCGTCCTCAAATAGA 18365021 Query 66984 GTATTCTCTACTGTAACACCATGAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCT 67043 || || || || || | |||||||| || | |||| || | || | | || || Sbjct 18365020 GTGTTTTCCACGGTTGCCCCATGAATAGCGCATAGCAGAGCCGCGCCTAATACTCCGGCA 18364961 Query 67044 ACACCCATCATATGAAACGG 67063 || |||||||||||||| || Sbjct 18364960 ACTCCCATCATATGAAATGG 18364941 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 67860 GTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCAGCGCGGTTGAGAACGTC 67919 || ||| || ||||| || ||||| ||||||||| | | | || ||||||| | || Sbjct 14982186 GTGGTGAGCATTACGTTCGTGCATTACTTCCATAGCAAGATTTGCACGGTTGATGATATC 14982245 Query 67920 TGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGACTGGTTGAAGTTGAAACC 67979 ||||| ||| | ||| ||| ||||||| | ||| |||||||| ||||| || Sbjct 14982246 AGCCCAAGTATAAATAACGCGACCTTGGCTATCAACTACAGA-TGGTTGAAATTGAACCC 14982304 Query 67980 ATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAACCAGAT 68027 ||| || ||||| ||||| || |||| ||| | ||||||||||| || Sbjct 14982305 ATTTAGATTGAAAGCCATAGTCCTAATACCTAAAGCAGTGAACCAAAT 14982352 >seq10 Length=20731201 Score = 378 bits (418), Expect = 8e-100 Identities = 446/604 (74%), Gaps = 10/604 (2%) Strand=Plus/Minus Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898 |||||| ||||| |||||||||||||| || ||||| || ||||| ||||||||||| | Sbjct 18976244 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAG 18976185 Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958 | ||| ||||||| | || ||||| ||| ||| | ||||||| | Sbjct 18976184 ATTAGCACGGTTGATGATATCAGCCCAAGTA---------TTAATTGG-CTATCAACTAC 18976135 Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGT 68018 | | |||||||| ||||| || || || ||||| ||||| || |||| ||| | ||| | Sbjct 18976134 ATATTGGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAAT 18976075 Query 68019 GAACCAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTT 68078 |||||| || || || |||||||| ||||| | ||||||||| | || || |||||||| Sbjct 18976074 GAACCAAATCCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGATCGAGAGTTGTT 18976015 Query 68079 GAACGATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTA 68138 || ||||| |||||||| | || || || || ||||| || || ||||| || || Sbjct 18976014 AAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCGGCCACAATATTATA 18975955 Query 68139 AGTCTCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTC 68198 ||||||||| |||||||| || ||||||| | || || || ||||||||||||| Sbjct 18975954 AGTCTCTTCCTCTTGACCAAATCTGTAACCCTCATTAGCAGATTCGTTTTCAGTGGTTTC 18975895 Query 68199 ACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAA 68258 | | || ||| || |||| |||||||||||| ||||| || || || || || || Sbjct 18975894 CCCGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTAAATAGGGAACCGCCGAA 18975835 Query 68259 TACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAA 68318 ||| ||||| || || | ||| || || | ||||| |||||||| || ||||| ||||| Sbjct 18975834 TACACCAGCTACACCTAACATGTGAAATAGATGCATAAGGATGTTATGATCTGCCTGGAA 18975775 Query 68319 CACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACC 68378 || | ||| |||||||||||||||| || || | |||||| | ||| |||| || Sbjct 18975774 TACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCATCAAAGAAACTTCC 18975715 Query 68379 TTGACCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGC 68438 |||||| | ||| || | || ||| || || | || ||||||||||| || || ||||| Sbjct 18975714 TTGACCAATAGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGC 18975655 Query 68439 AACA 68442 |||| Sbjct 18975654 AACA 18975651 Score = 159 bits (176), Expect = 4e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 68186 TTTCAGTGGTTTCACGAACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACA 68245 ||||||||||||| | | || ||| || |||| |||||||||||| |||||||| | Sbjct 9553449 TTTCAGTGGTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATA 9553508 Query 68246 GAGATCCACCAAATACGCCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGT 68305 | || || || ||||| ||||| || || | ||| || || || ||||| |||||||| | Sbjct 9553509 GGGAACCGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGGATGTTAT 9553568 Query 68306 GCTCTGCTTGGAACACCAGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGT 68365 ||||||| ||||| || | ||| |||||||||||||||| || || | |||||| | | Sbjct 9553569 GCTCTGCCTGGAATACAATCATAAAGTTGAAAGTACCAGATATTCCTAAAGGCATACCAT 9553628 Query 68366 CAGAGAACGAACCTTGACCGAAAGGATA 68393 ||||||| |||||||| | ||| || Sbjct 9553629 CAGAGAAACTTCCTTGACCAATAGGGTA 9553656 >seq12 Length=23561512 Score = 203 bits (224), Expect = 4e-47 Identities = 221/288 (77%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 68540 AAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGT 68599 ||||||| |||||||| ||||||||||||| | ||| ||||||||||| | ||||||| Sbjct 9700600 AAGGACCGCCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGAGTAAAAGT 9700541 Query 68600 GAAGACCAATTGCATTTGAACTAGGAACAACAGCACCAGAAATGATGTTGTTACCATACA 68659 | | || || ||| | ||| |||||| || | |||||| || || ||||| || || | Sbjct 9700540 GCAATCCGATCGCAGTAGAAGTAGGAATAATGGTACCAGAGATAATATTGTTTCCGTAAA 9700481 Query 68660 GAAGTGAACCAGCAACAGGTTCACGAATACCATCGATGTCCACAGGGGGAGCAGCGATGA 68719 | | |||||| |||| | |||||||||||||| || || | || || |||||||||| Sbjct 9700480 GTAAAAAACCAGAAACATGCTCACGAATACCATCAATATCTGCTGGAGGGGCAGCGATGA 9700421 Query 68720 AGGCGACGATGAA-ACAGATGGTTGCTG-CAAGCAGCGTAGGGATCATCAGGACGCCGAA 68777 |||||| || || ||||| ||||| | ||| || ||||||||||||| || || || Sbjct 9700420 AGGCGATAATAAATACAGA-AGTTGCGGTCAATAAG-GTAGGGATCATCAAAACACCAAA 9700363 Query 68778 CCAACCAACGTAAAGGCGGTTCTCTGTGGAAGTCACCCATTCGCAGAA 68825 ||| |||| |||||| ||||| || ||| ||| | ||| | |||||| Sbjct 9700362 CCATCCAATGTAAAGACGGTTTTCGGTGCTAGTTATCCAGTTGCAGAA 9700315 Score = 125 bits (138), Expect = 8e-24 Identities = 152/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 67839 AGCAGCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAA 67898 |||||| ||||| |||||||||||||| | ||||| || || || ||| ||||||| | Sbjct 9700937 AGCAGCTAGGTCTAGAGGGAAGTTGTGAGTATTACGTTCGTGTATTACTCCCATACCAAG 9700878 Query 67899 ACCAGCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGAT 67958 | ||| || |||| | || ||||| ||| | ||| ||| ||||||| | Sbjct 9700877 ATTAGCACGATTGATGATATCAGCCCAAGTATTAATAACGCGACCTTGGCTATCAACTAC 9700818 Query 67959 AGACTGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGT 68018 ||| | |||||| ||||| || || || ||||| ||||| || |||| ||| | ||||| Sbjct 9700817 AGATTAGTTGAAATTGAATCCGTTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGT 9700758 Query 68019 GAACCAGATACCAACGACAGGCCATGC 68045 |||||| || || || |||||||| || Sbjct 9700757 GAACCAAATCCCTACTACAGGCCAAGC 9700731 >seq4 Length=30521686 Score = 203 bits (224), Expect = 4e-47 Identities = 223/294 (76%), Gaps = 2/294 (1%) Strand=Plus/Plus Query 67038 CCTGCTACACCCATCATATGAAACGGGTTCAAGGTCCAGTTATGGAATCCTTGTAGGAAG 67097 || || || |||||||||||||| |||||||| ||||| ||||| |||||||| | |||| Sbjct 19658219 CCGGCAACTCCCATCATATGAAATGGGTTCAACGTCCAATTATGAAATCCTTGGAAGAAG 19658278 Query 67098 AGAAGGAATCGAAAGATTGCTGAGACCCCGAAAGATGGAGCGAAAAACCAACTCGATTGA 67157 || | ||||||||| || |||| || || ||| || || || ||||||| ||||| Sbjct 19658279 AGGATGAATCGAAATATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGC 19658338 Query 67158 CCCAGAGGGTAGATGAGAAAGACACTAACAAAAACAGCGATAGGACCAGAGAACGCAATA 67217 ||||| || || || || || || |||||||| |||||| || |||||||| | ||| Sbjct 19658339 CCCAGTGGATAAATCAGGAATACGGAAACAAAAATAGCGATTGGGCCAGAGAATGAAATT 19658398 Query 67218 GCATTGTAGGGACGGATACCGATGAGA-CGTGCCAGTTCAAACTGGCGAAGCATGAAACC 67276 ||||| || || || | | || ||| || | |||||||| || | | ||||||||| Sbjct 19658399 GCATTATAAGGCCGCA-ATTGAACAGACCGAGTAAGTTCAAATTGACATAACATGAAACC 19658457 Query 67277 AATTAGAGCGAAAGCCCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCAAGTTG 67330 ||||| || |||||||| ||||| || |||||| |||| || || || | ||| Sbjct 19658458 TATTAGTGCAAAAGCCCCATGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 19658511 Score = 136 bits (150), Expect = 5e-27 Identities = 163/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 67113 ATTGCTGAGACCCCGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATG 67172 || |||| || || ||| || || || ||||||| ||||| ||||| || || || Sbjct 7261447 ATCGCTGCTACGCCAAAACTCGGCGCAAAGAACCAACCGGATTGCCCCAGTGGATAAATC 7261388 Query 67173 AGAAAGACACTAACAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGG 67232 || || || ||||||||||||||| || |||||||| | ||| ||||| || || || Sbjct 7261387 AGGAATACGGAAACAAAAACAGCGATTGGGCCAGAGAATGAAATTGCATTATAAGGCCGC 7261328 Query 67233 ATACCGATGAGA-CGTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGC 67291 | | || ||| || || |||||||| || || | ||||||||| ||||| || ||||| Sbjct 7261327 A-ATTGAACAGACCGAGCAAGTTCAAATTGACGTAACATGAAACCTATTAGTGCAAAAGC 7261269 Query 67292 CCCGTGGAGCGCCACAAAATTCCAGAGTCCTCCAAGTTG 67330 ||| ||||| || |||||| |||| || || || | ||| Sbjct 7261268 CCCATGGAGAGCAACAAAAGTCCACAGACCACCTAATTG 7261230 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 68476 AGTTCCCATTCACGTCCCATGTATGCAAAGATACCAATCAGGAAGTGAAAGATTACGAGT 68535 |||||||| ||||| ||||| || | | ||||| | |||||| | | | || Sbjct 7243216 AGTTCCCACTCACGACCCATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGC 7243157 Query 68536 TGGAAAGGACCACCATTGTACAACCACTCATCAAGGGTTGCTGCTTCCCAAATGGGATAA 68595 | |||||||||||||||| ||||||||||||| | ||| ||||||||||| || ||| Sbjct 7243156 TCATAAGGACCACCATTGTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAA 7243097 Query 68596 AAGTGAAGACCAATTGCATTTGAACTAGGAA 68626 ||||| | || || || ||| |||||| Sbjct 7243096 AAGTGCAATCCGATCGCCGCAGAAGTAGGAA 7243066 >seq6 Length=27870862 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 67981 TTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAACCAGATACCAACGACAGGC 68040 || || ||||| ||||| || |||| ||| | ||||||||||| || || || |||||| Sbjct 8615047 TTTAGATTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAAATCCCTACTACAGGC 8615106 Query 68041 CATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAACGATGCATACTGGAAGATC 68100 || ||||| | ||||||||| | ||||| |||||||| || ||||| |||||||| Sbjct 8615107 CAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTAAAACTAGCATATTGGAAGATT 8615166 Query 68101 AGACGACCGAAGTATCCA 68118 | || || || || ||| Sbjct 8615167 AATCGGCCCAAATAACCA 8615184 >seq1 Length=39866532 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 17088831 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 17088774 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 17088773 TCTACCACTGAGCTACTGAGGA 17088752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/82 (84%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 35501 AATCATATAACTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGC 35560 ||||| || ||||||| |||||||| ||||||||||||| || ||||||| ||| || Sbjct 22987658 AATCAAAT--CTCCCCAAGTAGGATTCGAACCTACGACCAGTCAGTTAACAGCCGACCGC 22987601 Query 35561 TCTGCCGCTGAGCTACTGAGGA 35582 ||| || ||||||||||||||| Sbjct 22987600 TCTACCACTGAGCTACTGAGGA 22987579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572027098703760