Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq2 531 6e-146 seq8 500 9e-137 seq10 354 9e-93 seq4 201 1e-46 seq12 127 2e-24 seq6 91.5 2e-13 >seq2 Length=33962743 Score = 531 bits (588), Expect = 6e-146 Identities = 725/1010 (72%), Gaps = 8/1010 (1%) Strand=Plus/Minus Query 159306 GATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGGTCTGGACTACTACTTCTT 159365 || |||||| | | | || || ||||||||||| || |||||||| ||| | ||| || Sbjct 13366825 GACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTTTT 13366766 Query 159366 CCCACTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTGG 159425 || ||||||| | || | || |||||| |||| || ||| ||||||| || |||| Sbjct 13366765 CCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTTGG 13366706 Query 159426 TACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTCACAGCAGCTGTC 159485 || ||||| || | || ||||||||| | || ||| || || | || | ||| || Sbjct 13366705 TATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTAACCGTAGCAGTT 13366646 Query 159486 TCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAG 159545 || | ||||| | | | | || ||| | | ||||| ||||| || || | || Sbjct 13366645 TCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCACAA 13366586 Query 159546 GGGAATTTCCAGCGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGT 159605 ||| |||| || ||||| ||| | || || |||||| |||||| || ||||| || Sbjct 13366585 GGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCATGGG 13366526 Query 159606 GCCTTCGCCCTAATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCT---CATTGG 159661 || || || ||||| ||||||||| | ||||| |||||||| || || ||| || | | Sbjct 13366525 GCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAATTG 13366466 Query 159662 TATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTT 159721 | | ||||| ||||| ||| | |||||||| || |||||||||||||| ||| || Sbjct 13366465 T----GGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATT 13366410 Query 159722 CCTCATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGC 159781 || || || ||| |||| || ||| ||||||| || || ||| ||||| || ||||| Sbjct 13366409 CCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 13366350 Query 159782 AATCTTTAGATTCCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCA 159841 || ||| ||||| | | ||| | ||||||||||| || |||||||| || || || || Sbjct 13366349 GATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 13366290 Query 159842 TATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTAC 159901 ||||||||||||||| || || |||| | || || || | || || ||||| | || Sbjct 13366289 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAAC 13366230 Query 159902 TGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTC 159961 || || ||||| || | ||| || || || ||||||||||| | ||| | | Sbjct 13366229 CGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCC 13366170 Query 159962 AACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 160021 |||||||| || || ||||| || |||||||| || || ||||| ||||| || ||||| Sbjct 13366169 AACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 13366110 Query 160022 CGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTAT 160081 ||| |||| ||||| || || || ||| | |||||||| ||| | ||||| || || | Sbjct 13366109 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCAC 13366050 Query 160082 GGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTTACGA 160141 ||| | |||| |||||||| | | ||||| ||||| || || | ||| || || Sbjct 13366049 CGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGA 13365990 Query 160142 TTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAA 160201 ||||| || || ||| | ||||| |||||||| ||||||||||| ||||||||||| Sbjct 13365989 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 13365930 Query 160202 AAACATCCTATTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGA 160261 ||| || || || ||| | || | ||||| ||| ||||| || ||||| || ||||| Sbjct 13365929 AAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 13365870 Query 160262 AAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311 ||| |||| ||||| || || || || | || ||||| ||||||| Sbjct 13365869 AAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCTTTAAT 13365820 Score = 174 bits (192), Expect = 2e-38 Identities = 230/319 (72%), Gaps = 0/319 (0%) Strand=Plus/Plus Query 159829 TAAATCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTCAGTGCCA 159888 || |||| || ||||||||||||||||| || || |||| | || || || | || | Sbjct 18364936 TAGATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTA 18364995 Query 159889 TCCATGGCGTTACTGTAGAGAACACACTGTATGAAGATGGAGAACAAGCAAATACCTTTA 159948 | ||||| | || || || ||||| || | ||| || || || ||||||||||| Sbjct 18364996 TTCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCC 18365055 Query 159949 AGGCGTTTGATTCAACTCAAGAGGAGGAGACTTACTCTATGGTCACTGCAAACCGCTTCT 160008 || ||| | ||||||||| || || ||||| || |||||||| || || ||||| | Sbjct 18365056 GCGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTT 18365115 Query 160009 GGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGT 160068 |||| || ||||| ||| |||| ||||| || || || ||| | |||||||| ||| | | Sbjct 18365116 GGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTAT 18365175 Query 160069 TTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTTAATC 160128 |||| || || | ||| | |||| |||||||| | | ||||| ||||| || | Sbjct 18365176 TTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACC 18365235 Query 160129 TTCGTGCTTACGATTTCGT 160147 | ||||| || || ||||| Sbjct 18365236 TACGTGCCTATGACTTCGT 18365254 Score = 122 bits (134), Expect = 1e-22 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 160152 CAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTA 160211 || || ||| | ||||| |||||||| ||||||||||| |||||||||||||| || || Sbjct 13367213 CAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 13367272 Query 160212 TTGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGAAAACTTTATC 160271 || ||||| || | ||||| ||| ||||| || ||||| || |||||||| |||| Sbjct 13367273 TTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATA 13367332 Query 160272 TTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311 ||||| || || || | || | || ||||| ||||||| Sbjct 13367333 TTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 13367372 >seq8 Length=25958679 Score = 500 bits (554), Expect = 9e-137 Identities = 708/991 (71%), Gaps = 27/991 (3%) Strand=Plus/Plus Query 157580 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 157639 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 157640 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 157698 || || || || | | | | ||||| | ||| || || |||||||| || |||| Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTT-TGTATTTATTATCGCCTTCATCACTGC--- 20127927 Query 157699 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 157758 |||| | ||||| | || |||||| | | || || ||||| Sbjct 20127928 CCCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 20127971 Query 157759 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 157818 || ||||||||||| || | || |||| || || || | ||||| || || || Sbjct 20127972 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 20128031 Query 157819 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 157878 |||||||| ||||| ||||||||||| | || || || ||||||| | || | || Sbjct 20128032 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 20128091 Query 157879 ATTTCACTTCCTCATTG--GTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATAC 157936 | |||||| | ||| ||| || ||| ||||| |||||||||||||| | | Sbjct 20128092 TCTACACTTCTTACTTGGTGTAGCTTGTCAT--ATGGGTCGTGAGTGGGAACTGAGTTTC 20128149 Query 157937 CGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCT 157996 ||| | |||||||| || ||||| ||| |||||||| ||||| || || || || || Sbjct 20128150 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACT 20128209 Query 157997 GCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGT 158056 ||||| ||| | || ||| | |||||||| |||||| |||| ||||||| | || Sbjct 20128210 GCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 20128269 Query 158057 ATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCAC 158116 || ||||||||||| |||| ||| |||||||||| ||||| || |||||||||||||| Sbjct 20128270 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCAT 20128329 Query 158117 CCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCAC 158176 || || || ||| | ||||| ||||| |||||||| || || || ||| ||||||||| Sbjct 20128330 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 20128389 Query 158177 GGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACTA 158235 || | || || | || | | || | ||||| ||||||| || || || | Sbjct 20128390 GGTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 20128448 Query 158236 CGGTTACAAGTTCGGTCAAGAGGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTT 158295 ||||||| || ||||||||||||||||| ||||| || || || || ||||| || || Sbjct 20128449 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 20128508 Query 158296 CGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCT 158355 || || || ||||||||||| ||| || |||||||| ||||| || ||||||||| | Sbjct 20128509 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTT 20128568 Query 158356 TGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATT 158415 | || |||||||| || || || |||||||| || | || | || ||||| || Sbjct 20128569 GGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 20128628 Query 158416 CAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAA 158475 ||| || ||||| ||||| |||||||| || | ||||| | || ||||| || | || Sbjct 20128629 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 20128688 Query 158476 CACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAA 158535 || ||||| ||| | | ||||| ||| ||||||||||||||| ||||| || ||||| Sbjct 20128689 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 20128748 Query 158536 CGCACACAACTTCCCACTCGACCTTGCTGCT 158566 || ||||||||||| || ||||| |||||| Sbjct 20128749 TGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq10 Length=20731201 Score = 354 bits (392), Expect = 9e-93 Identities = 442/605 (73%), Gaps = 12/605 (2%) Strand=Plus/Plus Query 157963 TGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTCTATCCTTTCGG 158022 ||| |||||||| ||||| || || || || ||||||| ||| | | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 158023 TCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCT 158082 |||||| ||||| |||| ||||||| | || || ||||||||||| |||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 158083 TGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGG 158142 ||||||||| ||||| || |||||||||||||| | || || ||| | ||||| ||||| Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 158143 GGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGT 158202 |||||||| || || || || ||||||||| || | || || | || | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCT-CTAGTTTGA 18975889 Query 158203 TC-GTGAAACGACTGAAACAGAGTCACAGAACTACGGTTACAAGTTCGGTCAAGAGGAAG 158261 || | ||||| ||||||| || || || | ||||||| || ||||||||||||| Sbjct 18975890 TCGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAG 18975949 Query 158262 AGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTT 158321 |||| ||||| || || || || ||||| || || || || || ||||||||||| ||| Sbjct 18975950 AGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTA 18976009 Query 158322 CATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCT 158381 || |||||||| || || || ||||||||| | ||||| |||||||| || || || | Sbjct 18976010 GTTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTT 18976069 Query 158382 GGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACC 158441 |||||| || | || | || ||||| ||||| || ||||| ||||| ||||||| Sbjct 18976070 GGTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACC 18976129 Query 158442 AGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCG 158501 | | | ||||| | || | || || ||||| ||| | | ||||| | Sbjct 18976130 AATATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACCGTG 18976179 Query 158502 CTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTG 158561 || ||||||||||||||| ||||| || ||||| || ||||||||||| || ||||| | Sbjct 18976180 CTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAG 18976239 Query 158562 CTGCT 158566 ||||| Sbjct 18976240 CTGCT 18976244 Score = 149 bits (164), Expect = 7e-31 Identities = 133/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 158012 TATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTT 158071 || ||| | |||||||| |||||| |||| ||||||| | || || ||||||||||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 158072 AACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTC 158131 |||| ||| |||||||||| ||||| || |||||||||||||| || || || ||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 158132 GGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 158178 ||||| ||||| |||||||| || || || ||| ||||||||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 9553490 >seq4 Length=30521686 Score = 201 bits (222), Expect = 1e-46 Identities = 235/315 (75%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 159558 CGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGTGCCTTCGCCCTA 159617 || ||||| ||| | || || | |||| |||||| || ||||| || || || || ||| Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 159618 ATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCTCATTGGTATCCGTCCTTACAA 159676 || ||||||||| | |||| |||||||| | || ||| | | | || ||||| || Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAA 19658402 Query 159677 TGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCATT 159736 ||| ||| | |||||||| || || ||| ||||||| ||| ||||| || || ||| | Sbjct 19658401 TGCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACT 19658342 Query 159737 GGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCT 159796 ||| || ||| ||||||| || || ||| ||||| || ||||| || ||| ||||| | Sbjct 19658341 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCAT 19658282 Query 159797 GTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATATGATGGGAGTTGC 159856 | ||| | ||||||||||| || |||||||| || || || ||||||||||||||||| Sbjct 19658281 CCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGC 19658222 Query 159857 TGGTATACTAGGTGG 159871 || || |||| || Sbjct 19658221 CGGAGTATTAGGCGG 19658207 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 159558 CGGTGGTGCCAACTTGGGGGATTATGGAATTTTGTGGCACTCCACGGTGCCTTCGCCCTA 159617 || ||||| ||| | || || | |||| |||||| || ||||| || || || || ||| Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 159618 ATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACG-TCTCATTGGTATCCGTCCTTACAA 159676 || ||||||||| | ||||| |||||||| || || ||| | | | || ||||| || Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAA 7261339 Query 159677 TGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCCATT 159736 ||| ||| | |||||||| || || ||||||||||| ||| ||||| || || ||| | Sbjct 7261340 TGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACT 7261399 Query 159737 GGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 159784 ||| || ||| ||||||| || || ||| ||||| || ||||| || Sbjct 7261400 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 127 bits (140), Expect = 2e-24 Identities = 202/287 (70%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 157580 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 157639 |||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 157640 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 157698 ||||| || || | ||| | ||||| ||||| || || |||||||| ||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 157699 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 157758 || | || || || || || ||||| | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 157759 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 157818 || ||||||||| | || | || |||| | || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 157819 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 157865 |||||||| ||||| ||||||||||| | || || || ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 Score = 122 bits (134), Expect = 1e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 158360 GCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAAC 158419 || |||||||| || || || |||||||| || | || | || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 158420 CTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACC 158479 || ||||| ||||| |||||| | || | ||||| | || ||||| || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 158480 TGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCA 158539 ||||| ||| | | || || ||| ||||||||||| ||| || || || ||||| | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 158540 CACAACTTCCCACTCGACCTTGCTGCT 158566 ||||||||||| || ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq6 Length=27870862 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 158287 TGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCA 158346 ||| || || || || || ||||||||||| ||| || |||||||| ||||| || || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 158347 CTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCAC 158406 ||||||| | ||||| |||||||| || || || |||||||| || | || | || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 158407 GATGGCATTCAACCTGAA 158424 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Score = 82.4 bits (90), Expect = 8e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 160116 CTTGCTCTTAATCTTCGTGCTTACGATTTCGTAAGTCAAGAGATCAGAGCAGCAGAAGAT 160175 || ||||| || | |||| || || ||||| ||||| | | | |||||| || || Sbjct 6536584 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAAAACAT 6536525 Query 160176 CCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAACGAAGGACTACGTGCATGG 160235 || ||||||||||| |||| ||||||||| || || || ||||| | | ||||| ||| Sbjct 6536524 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 6536465 Query 160236 TTGGCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGT 160285 || | || |||| || |||||| |||| ||||| || || || Sbjct 6536464 ATGATAGCTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGT 6536415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548348228831760