Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq2 578 4e-160 seq8 558 4e-154 seq10 361 6e-95 seq4 201 1e-46 seq12 149 7e-31 seq6 95.1 1e-14 >seq2 Length=33962743 Score = 578 bits (640), Expect = 4e-160 Identities = 746/1018 (73%), Gaps = 10/1018 (1%) Strand=Plus/Minus Query 152359 TTTGATGTCCTGGATGACTGGCTTAAGA-GAGACCGTTTCGTTTTTGTTGGTTGGTCTGG 152417 |||||| | |||| |||||| ||| || | |||||||| |||||||| || |||||||| Sbjct 13366837 TTTGATATTATGGACGACTGG-TTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGG 13366779 Query 152418 ACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGACTACTTT 152477 || | |||||||| ||||||| | ||| | || |||||| |||| ||||| ||||| Sbjct 13366778 CCTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTT 13366719 Query 152478 CGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGC-GCAAACTTTC 152536 | || ||||||||| || || ||||| ||||||||| |||| || |||| |||| Sbjct 13366718 TGTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTC 13366661 Query 152537 TTA-CTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCTCTGG 152595 ||| | | |||||||| | || || || | | | || ||| | |||| || ||| Sbjct 13366660 TTAACCGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGG 13366601 Query 152596 GGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGCTTTT 152655 || || || || ||||||||||| | ||| ||| | || || || ||| ||||| Sbjct 13366600 GGCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTT 13366541 Query 152656 GTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACTGGCA 152715 || || ||||| |||||||| || ||||| ||||||||| | || || |||||||| || Sbjct 13366540 GTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCT 13366481 Query 152716 CG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTT 152774 || ||| || | | | || || ||||| ||| | |||||||| || || |||||||| Sbjct 13366480 CGATCTGTTCAAT-TGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTT 13366422 Query 152775 TGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTT 152834 |||| ||| || | || || || ||||| ||||| ||||||| || || || ||| Sbjct 13366421 TGTTTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTT 13366362 Query 152835 CGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGACATT 152894 || || ||||| || || |||||| | |||||| | |||||||| || || ||||| || Sbjct 13366361 TGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTT 13366302 Query 152895 GAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCAT 152954 ||| || |||||||||||||| ||||| || | || || | ||| |||| | || || Sbjct 13366301 GAACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTAT 13366242 Query 152955 TCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACAC-TTTCA 153013 |||||| | || || || || ||| | | | | || ||||| |||| || |||| Sbjct 13366241 TCATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCG 13366182 Query 153014 AAGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCT 153073 | |||| || ||||||| ||||| || ||||| ||||| || ||||| || || | Sbjct 13366181 CA-CTTTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTT 13366123 Query 153074 GGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGT 153133 ||||||| || ||||| |||||||| ||||||||| ||| | |||||||||||||| | Sbjct 13366122 GGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTAT 13366063 Query 153134 TTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATC 153193 ||||||| || | ||| | |||| | ||||||| | | || || ||||| || | Sbjct 13366062 TTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACC 13366003 Query 153194 TTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGA 153253 | | ||| || || || || || || |||||| | || | ||||||||||||||||||| Sbjct 13366002 TACTTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 13365943 Query 153254 CGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTG 153313 | ||||| || || ||||| ||||| ||| | ||| ||||||| ||| ||||| || | Sbjct 13365942 CTTTCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGG 13365883 Query 153314 ACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 | || |||||||| || | | |||||||| ||||| ||||| || |||||||| Sbjct 13365882 ATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT 13365825 Score = 179 bits (198), Expect = 4e-40 Identities = 233/322 (72%), Gaps = 0/322 (0%) Strand=Plus/Plus Query 152897 ATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTC 152956 |||| |||||||||||||| ||||| || | || || | ||| |||| | || |||| Sbjct 18364939 ATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 18364998 Query 152957 ATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTTCAAAG 153016 |||| | || || || || ||| | | | | || ||||| ||||| || ||| | Sbjct 18364999 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCG 18365058 Query 153017 CTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGT 153076 |||| || ||||||| ||||| || ||||| ||||| || ||||| || || |||| Sbjct 18365059 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 18365118 Query 153077 CCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTG 153136 |||| || ||||| |||||||| ||||||||| ||| | |||||||||||||| |||| Sbjct 18365119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 18365178 Query 153137 TACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTC 153196 |||| || | ||| | |||| | ||||||| | | || || ||||| || || | Sbjct 18365179 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 18365238 Query 153197 GTGCTTACGATTTTGTATCTCA 153218 |||| || || || || || || Sbjct 18365239 GTGCCTATGACTTCGTTTCCCA 18365260 Score = 131 bits (144), Expect = 2e-25 Identities = 131/170 (77%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 153202 TACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGAGACGTTCTAT 153261 || || || || || || |||||| | || | |||||||||||||||||||| ||||| Sbjct 13367198 TATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTAC 13367257 Query 153262 ACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGTTGACCAACCT 153321 || || ||||| ||||| ||||| ||| ||||||| ||| ||||| || || || ||| Sbjct 13367258 ACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCT 13367317 Query 153322 CATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 ||||| || | | |||||||| ||||| | ||||| || |||||||| Sbjct 13367318 CATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 13367367 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 151637 ATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTC 151696 || ||||||||||| | ||| | || || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 151697 AACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAAC 151756 ||||| || | | ||| | || || || | | || ||||| || | | ||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 151757 CGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAAC 151804 |||||| ||| | ||||||||| |||||||| |||||||||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq8 Length=25958679 Score = 558 bits (618), Expect = 4e-154 Identities = 700/961 (73%), Gaps = 21/961 (2%) Strand=Plus/Plus Query 150866 AACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACC 150925 |||||||| || |||| ||||||||||| |||| || || || | | | | ||||| Sbjct 20127839 AACCGTCTTTACATCGGATGGTTCGGTGTTTTGATAATCCCTACCTTATCGACCGCAACT 20127898 Query 150926 ATTTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 150985 || || || | || |||||| |||| |||| | ||||| Sbjct 20127899 TTTGTATTTATTATCGCCTTCATCACTGC---CCCTCT----------------CGTGAG 20127939 Query 150986 CCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCT 151045 | ||| |||||| | | | ||||| ||||| || ||||||||||| || ||||| || Sbjct 20127940 CATGTTTCTGGTTTTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTATTCCTACT 20127999 Query 151046 TCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGG 151105 ||| || ||||| ||||||| || || || |||||||| || ||| | ||||| ||| Sbjct 20128000 TCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGG 20128059 Query 151106 CTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTATCTATGCT 151165 | ||||| || ||||||| | || |||| | |||||| | ||||| | | | Sbjct 20128060 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGT 20128119 Query 151166 TACATGGGTCGTGAGTGGGAACTGTCTTACCGCTTGGGTATGCGTCCCTGGATCTGC-GT 151224 | ||||||||||||||||||||| || ||| ||||||||||||| ||||| ||| || Sbjct 20128120 CATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGGAT-TGCTGT 20128178 Query 151225 TGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGTCA 151284 |||||| || ||||| ||||| ||||| | ||| || ||| | || ||| | ||||| Sbjct 20128179 TGCATATTCAGCTCCTGTTGCGGCTGCTACTGCTGTTTTCTTGAATTACCCTATTGGTCA 20128238 Query 151285 AGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTTGT 151344 ||| ||||||||||| ||||| | || || ||||| || ||||||| ||| |||| Sbjct 20128239 AGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGT 20128298 Query 151345 CTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGTGT 151404 ||||| |||||||| ||||| || ||||| || || || ||| | ||||| |||||||| Sbjct 20128299 ATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGT 20128358 Query 151405 CTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCG 151464 ||||| || || || ||| || ||||| ||||| |||| || ||| || | | Sbjct 20128359 ATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 20128418 Query 151465 TGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 151524 || ||||| |||||||| || || | ||||||| || |||||||| |||||||| Sbjct 20128419 GGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGAC 20128478 Query 151525 CTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTT 151584 || || || || ||||| || ||||| ||||| || | ||||||||||| ||| || Sbjct 20128479 TTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTT 20128538 Query 151585 CAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTT 151644 ||||| || |||||| | ||||||||| | | ||| |||||||| || || || ||||| Sbjct 20128539 TAACAACTCTCGTTCGTTACACTTCTTCTTGGTAGCTTGGCCTGTAGTAGGGATTTGGTT 20128598 Query 151645 CACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTC 151704 |||||| | ||| | || || ||||| ||||| || ||||| ||||| |||||||| || Sbjct 20128599 CACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATC 20128658 Query 151705 CATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCAGG 151764 | | ||| | || || || | || || ||||| || | | |||||||| Sbjct 20128659 TGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAA 20128718 Query 151765 TCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCTGC 151824 ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct 20128719 TCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGC 20128778 Query 151825 T 151825 | Sbjct 20128779 T 20128779 >seq10 Length=20731201 Score = 361 bits (400), Expect = 6e-95 Identities = 443/603 (73%), Gaps = 10/603 (2%) Strand=Plus/Plus Query 151223 GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGTGCAGTGTTCCTCGTCTATCCTTTCGGT 151282 |||||||| || ||||| ||||| ||||| | ||| || ||| | | || ||| | ||| Sbjct 18975652 GTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGGT 18975711 Query 151283 CAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTCAACTACATGCTT 151342 ||||| ||||| ||||| ||||| | || || ||||| || ||||||| ||| || Sbjct 18975712 CAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATT 18975771 Query 151343 GTCTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTTGGTGTGGCTGGT 151402 || ||||| ||||| || ||||| || ||||| | || || ||| | ||||| |||||| Sbjct 18975772 GTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGGT 18975831 Query 151403 GTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTT 151462 || ||||| || || || || || ||||| ||||| |||| || ||| || | Sbjct 18975832 GTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATC 18975891 Query 151463 CGTGAGACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAG 151522 | || ||||| |||||||| || || | ||||||| || |||||||| |||||| Sbjct 18975892 GGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAG 18975951 Query 151523 ACCTACAACATCGTTGCCGCACACGGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCC 151582 || || || || || ||||| || ||||| ||||| || | ||||||||||| ||| Sbjct 18975952 ACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGT 18976011 Query 151583 TTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGG 151642 || ||||| || || || | ||||||||| | || || |||||||| || || || ||| Sbjct 18976012 TTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGG 18976071 Query 151643 TTCACTGCACTTGGTGTCAGCACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 151702 |||| ||| | ||| | || || ||||| ||||| || ||||| ||||| |||||||| Sbjct 18976072 TTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAA 18976131 Query 151703 TCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTGAACCGTGCA 151762 | ||| | | | | || || | || || ||||| || | | |||||||| Sbjct 18976132 T-----ATGTA-GTTGATAGCCAA----TTAATACTTGGGCTGATATCATCAACCGTGCT 18976181 Query 151763 GGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTTGCT 151822 ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||| Sbjct 18976182 AATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCT 18976241 Query 151823 GCT 151825 ||| Sbjct 18976242 GCT 18976244 Score = 140 bits (154), Expect = 4e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151271 TATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGTATTTCTGGCACATTC 151330 || ||| | |||||||| ||||||||||| ||||| | || || ||||| || ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 151331 AACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCACCCCTTCCATATGCTT 151390 |||| ||| |||| ||||| |||||||| ||||| || ||||| || || || ||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 151391 GGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCACGGTTCTCTGGTTACT 151450 ||||| |||||||| ||||| || || || ||| || ||||| ||||| |||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 151451 TCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTC 151485 ||| || | | || ||||| |||||||| || Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAAACGAATC 9553442 >seq4 Length=30521686 Score = 201 bits (222), Expect = 1e-46 Identities = 219/288 (76%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 152638 GGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTT 152697 || || || ||| ||||||| || ||||| |||||||| || ||||| ||||||||| | Sbjct 19658505 GGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTA 19658446 Query 152698 CGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTC 152756 | || |||||||| | || ||| || | | || || || ||||| ||| | ||||| Sbjct 19658445 TGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTC 19658387 Query 152757 TGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTG 152816 ||| || |||||| |||||||| ||| || || || || || ||||| ||||| |||| Sbjct 19658386 TGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTG 19658327 Query 152817 GTTTTTCGCTCCATCTTTCGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGG 152876 ||| || || || ||| || || ||||| || || |||||| | |||||| | ||||| Sbjct 19658326 GTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGG 19658267 Query 152877 ATTCCACAACTGGACATTGAATCCGTTTCATATGATGGGTGTTGCAGG 152924 ||| || || ||||| ||||| || |||||||||||||| ||||| || Sbjct 19658266 ATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 19658219 Score = 143 bits (158), Expect = 3e-29 Identities = 161/213 (76%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 152638 GGAGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTT 152697 || || || ||| ||||||| || ||||| |||||||| || ||||| ||||||||| | Sbjct 7261236 GGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTA 7261295 Query 152698 CGCCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTC 152756 || || |||||||| || || ||| || | | || || || ||||| ||| | ||||| Sbjct 7261296 CGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTCATTCTC 7261354 Query 152757 TGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTG 152816 ||| || ||||||||||||||| ||| || || || || || ||||| ||||| |||| Sbjct 7261355 TGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCCGGTTG 7261414 Query 152817 GTTTTTCGCTCCATCTTTCGGGGTCGCAGCAAT 152849 ||| || || || ||| || || ||||| || Sbjct 7261415 GTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 Score = 104 bits (114), Expect = 3e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 151038 TTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCG 151097 ||||| ||||| || ||||| ||||||| || || || |||||||| || ||| | | Sbjct 7243066 TTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTG 7243125 Query 151098 ATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTCCTGATTGGTA 151157 |||| ||| | ||||| |||||||||| | || |||| | |||||| | ||||| Sbjct 7243126 ATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 7243185 Query 151158 TCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACCG 151197 | | ||| ||||||||||||||||||||| || ||| Sbjct 7243186 TAGCTTGTTATATGGGTCGTGAGTGGGAACTGAGTTTCCG 7243225 >seq12 Length=23561512 Score = 149 bits (164), Expect = 7e-31 Identities = 202/282 (72%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 150866 AACCGTCTGTATGTCGGTTGGTTCGGTGTGCTGATGATTCCAACTCTGTTGGCAGCAACC 150925 |||||||| || | || ||||| ||||| ||||||| || || | ||| | ||||| Sbjct 9700342 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 9700401 Query 150926 ATTTGCTTCATCGTGGCATTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAA 150985 | || || | || ||||||||||| || || | || || ||||| || ||||| Sbjct 9700402 TCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGCAGATATTGATGGTATTCGTGAG 9700461 Query 150986 CCCGTTGCTGGTTCTCTGATGTACGGTAACAACATCATCTCTGGTGCTGTTGTTCCTTCT 151045 | ||| |||||| | | | ||||| ||||| || ||||||||| | || ||||| || Sbjct 9700462 CATGTTTCTGGTTTTTTACTTTACGGAAACAATATTATCTCTGGTACCATTATTCCTACT 9700521 Query 151046 TCTAACGCTATCGGTCTGCACTTCTATCCCATCTGGGAAGCAGCCTCTCTCGATGAATGG 151105 |||| || ||||| ||||||| || | || |||||||| || ||| | ||||| ||| Sbjct 9700522 TCTACTGCGATCGGATTGCACTTTTACTCAATTTGGGAAGCTGCATCTGTTGATGAGTGG 9700581 Query 151106 CTCTACAACGGTGGTCCTTTCCAACTCGTTGTCTTCCACTTC 151147 | ||||| || ||||||| | || |||| | |||||| Sbjct 9700582 TTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTC 9700623 Score = 131 bits (144), Expect = 2e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151619 GCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTCAAC 151678 || |||||||| || || || ||||||||||| | ||| | || || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 151679 CTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACC 151738 || ||||| ||||| |||||| | || | | ||| | || || || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 151739 TGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCT 151798 ||||| || | | || ||||| ||| ||||||| ||| || ||||| |||||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 151799 CACAACTTCCCTCTCGACCTTGCTGCT 151825 |||||||||||||| ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq6 Length=27870862 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 151547 GGTTACTTTGGTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCAC 151606 ||||| || || || | ||||||||||| ||| || ||||| || ||||| | ||| Sbjct 8615183 GGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 8615124 Query 151607 TTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACC 151666 |||||| | || || |||||||| || || || ||||||||||| | ||| | || || Sbjct 8615123 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 8615064 Query 151667 ATGGCATTCAACCTGAA 151683 ||||| ||||| || || Sbjct 8615063 ATGGCTTTCAATCTAAA 8615047 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 153181 CTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGAT 153240 || ||||| || | |||| || || || || | ||||||| | | || || || || Sbjct 6536584 CTGGCTCTGAACTTACGTGTGTATGACTTCGTTTTCCAAGAAACCCGTGCAGCAAAACAT 6536525 Query 153241 CCTGAATTTGAGACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGG 153300 |||||||||||||| |||| || || ||||| ||||| ||||| || ||||||| ||| Sbjct 6536524 CCTGAATTTGAGACTTTCTGCACCAAAAATATTCTTTTAAACGAGAGTATTCGTGCGTGG 6536465 Query 153301 TTGGCACCTGTTGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGA 153360 || | || || | ||| ||| || | | |||||||| ||||| | ||||| Sbjct 6536464 ATGATAGCTCAGGATCTGCCTAGTGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGT 6536405 Query 153361 GGCAAC 153366 || ||| Sbjct 6536404 GGAAAC 6536399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549596169270960