Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6 230 3e-54 seq5 138 1e-26 seq3 132 6e-25 seq1 129 7e-24 seq9 123 3e-22 seq8 120 4e-21 seq11 109 7e-18 seq7 102 1e-15 >seq6 Length=27870862 Score = 230 bits (254), Expect = 3e-54 Identities = 248/322 (77%), Gaps = 5/322 (2%) Strand=Plus/Minus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| ||| ||||| |||||| |||||| |||||||||||||||| || ||||| Sbjct 1267705 CGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGGGAGAT 1267646 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||||||| ||||||||||| || | ||||| ||| | ||| ||||||| | Sbjct 1267645 GAGCTCCATCCAGTCGAACGGGTTGG-CGACGTTGTACATCTTCTTGCACCCGAGCGCCA 1267587 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||||| ||||||||||| |||||||||||||||| |||||| || ||||||| |||| Sbjct 1267586 TGAGCAGCCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGCTCGCCGTTCATCCCGA 1267527 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| || || |||| |||| || ||||| ||||||| || ||||| ||| ||| Sbjct 1267526 CGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCCACGGCGTCGGCGA 1267467 Query 868929 TGATCTGCCTGGGCACGTCGGCCG-AGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 ||||| ||||| | ||| || | ||||| | ||| | |||||| |||||| Sbjct 1267466 CGATCT-CCTGGACGCGTGACTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAGGAGGCAG 1267408 Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008 || ||||||||||| | ||||| Sbjct 1267407 GCGAAGTCGCAGTGGAGACCCT 1267386 Score = 228 bits (252), Expect = 1e-53 Identities = 249/323 (77%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 |||| |||||| ||| ||||| |||||| |||||| |||||||||||||||| || Sbjct 7610317 GACGGACGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAG 7610376 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGA 868802 || || | ||||||||| ||| ||||| |||| | ||||| ||| | ||| |||| Sbjct 7610377 GGATATGAGCTCCATCCAGTCGAAGGGGTT-GGCGACGTTGTACATCTTCTTGCAGCCGA 7610435 Query 868803 GCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCA 868862 ||| | ||| |||||||||||||| |||||||||||||||| ||||||| || |||||| Sbjct 7610436 GCGCCATGAGGAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGTCGCCGTTCA 7610495 Query 868863 TGCCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCT 868922 |||||| |||||| || || |||| |||| || ||||| ||||||| |||||||| | Sbjct 7610496 TGCCGACGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCCCTCTCGATGTCGACGGCGT 7610555 Query 868923 CGACGATGATCTGCCTGGGCACGTCGGC-CG-AGGGCTTGTTGACGAGCATCGTGTAGAG 868980 || ||| ||||| | || | || || | || | ||||| | ||| | |||||| Sbjct 7610556 CGGCGACGATCT-CGCGGACGCG-CGCCTCGTCGAGCTTGCCGCGGAGGAGGTCGTAGAG 7610613 Query 868981 CAGGCAGGCAAAGTCGCAGTGCA 869003 |||||||| ||||||||||||| Sbjct 7610614 GAGGCAGGCGAAGTCGCAGTGCA 7610636 Score = 219 bits (242), Expect = 5e-51 Identities = 215/275 (78%), Gaps = 3/275 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||||||||||||||||||||||||| ||||| ||||| | | |||| || || || Sbjct 7610918 GAGTGGATGTTCTCGATGGCGATCTGGAATCCGTAGAAGGCGCGCGCCTCGGCGACCTGC 7610977 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||| | ||| ||||||||| ||||||||||||| ||||||||| Sbjct 7610978 ACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGAAG 7611037 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCG--CTGAGCGAC-ACCCAGTGG 869809 || || || ||||| ||| ||||||||||||||| | | | ||| | |||||||| Sbjct 7611038 AAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGACAGCGCGGCGTCCCAGTGG 7611097 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| ||| Sbjct 7611098 CGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCTTG 7611157 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 || | |||||| | ||| |||| | ||| ||||| Sbjct 7611158 TAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 7611192 Score = 210 bits (232), Expect = 3e-48 Identities = 215/277 (78%), Gaps = 3/277 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||||| | |||| || || | Sbjct 1267112 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGAGCCTCGGCGACCT 1267053 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||||||| | ||| ||||||||| ||||||||| ||| ||| |||| Sbjct 1267052 GCACGTCGGACATGAACCTGGAGGCGAGGTTCTCGAGCACGATGCCATCGGAGGCCGCGA 1266993 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC-GTCG-CTGAGCGAC-ACCCAGT 869807 | || || || ||||| || |||||||||||||| | || | | ||| | |||||| Sbjct 1266992 AGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGGCGACAGCGCGGCGTCCCAGT 1266933 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 || | ||||||| ||||||||||||||| || ||||||| ||| ||| | ||||| | Sbjct 1266932 GGCGCGCGTCGGCGGAGAGGTCCACCTCCTCCGCCGTCCAGAACGACGCCACCGCCTTCT 1266873 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 |||| | |||||| | ||| |||| | ||| ||||| Sbjct 1266872 TGTAGAACTCCCAGATCTGCGGGTACCTGATCGGGAA 1266836 Score = 197 bits (218), Expect = 2e-44 Identities = 215/286 (75%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| |||||||| ||| | |||||| |||| |||||| |||||||| |||||||| Sbjct 1267390 ACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGTCCGCGCTT 1267331 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| |||||||||||||| |||||||| ||||| ||||||||| ||| || Sbjct 1267330 CTTGAGCCAGAAGATGGCGCAGAATGAACCCGAGAAGAAGATCCCCTCGACGCAGGCGAA 1267271 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | ||| |||||||||||| ||| ||| ||| || |||||| ||| ||||| Sbjct 1267270 GGCGACGAGCCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCATCGCATGGCCCA 1267217 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||||||||| | ||| | || || |||||||||||||| |||||| ||||||| || Sbjct 1267216 GTCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTC 1267157 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 | | ||| || || || |||| ||| ||||| || ||||| Sbjct 1267156 GACGTCGTCGCGGATGTACGTCTCGAGCAGAAGCGAGTACATCTCC 1267111 Score = 194 bits (214), Expect = 2e-43 Identities = 213/284 (75%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| |||||||| || |||||| Sbjct 7610639 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGCCCCCGCTTC 7610698 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||| ||||||||| ||| ||| Sbjct 7610699 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATCCCCTCGACGCAGGCGAAG 7610758 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| |||||||| ||| ||| ||| || |||||| ||| |||||| Sbjct 7610759 GCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAG 7610812 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | ||| | ||| || |||||||||||||| || || ||||||| ||| Sbjct 7610813 TCGGCCTTGCGGCGCACGGCCGGGACGGTGTCGATGGCGCGGAACAGCCGGTCCTTCTCG 7610872 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||| || ||||| |||| ||| ||||| || |||| Sbjct 7610873 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTC 7610916 >seq5 Length=26652778 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 25292483 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 25292424 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||||||||| | ||| |||| | Sbjct 25292423 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGGCGGCGAGCTTCTCGAAGA 25292364 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 25292363 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 25292304 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||||||||||| |||||| ||||| Sbjct 25292303 GGACCTGCTTGAGAACCTTGAAGATG 25292278 Score = 100 bits (110), Expect = 3e-15 Identities = 148/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || || || || | ||||||||||||||| | | || Sbjct 19740273 GCTTGGCAAGCTCGCCGGGGAGGACGAGACGAACAGAGGTCTGGATCTCGCGGGAGGTGA 19740214 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| | || || | | ||||||| ||| ||| |||| Sbjct 19740213 TTGTGGGCTTCTTGTTGTACCTGGCAAGCCTGGCGGCCTCC-TGCTCGAGCTTCTCGAAA 19740155 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || || ||||||| | ||| | |||| |||||| || | ||| || Sbjct 19740154 ATGTCGTTGATGAAGGAATTCATGATGGGCATGGCCTTGGAGGAGATTCCTATGTCTGGA 19740095 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||||||||||| ||||| Sbjct 19740094 TGCACCTGCTTGAGCACCTTGAAGATG 19740068 >seq3 Length=34446443 Score = 132 bits (146), Expect = 6e-25 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 9170535 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 9170476 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATC 1254461 | ||| |||||| || | || || ||| ||||||| ||| ||| |||| Sbjct 9170475 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCC-TGCGCGAGCTTCTCGAAG 9170417 Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||| || |||||||||| |||||| | |||| |||||| || | ||| ||| Sbjct 9170416 ATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATTCCGATGTCCGGG 9170357 Query 1254522 TGCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||| || |||||| ||||| Sbjct 9170356 TGCACCTGCTTCAGGACCTTGAAGATG 9170330 Score = 93.3 bits (102), Expect = 5e-13 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||| |||||||||||||| | |||||||| Sbjct 2194675 GTCATCCACCGCGACGTCAAGTCGAGCAACGTCCTCCTCGACGCCAACATGGACGCCAAG 2194616 Query 1347667 ATCTCAGACTTTGGCCTCACGC-AGTGGTCGGCGCGCGCCCGCACGGCCGACGCCGTGGG 1347725 ||| | ||||| |||||| | | || | ||||||||||| | | ||| | |||| | Sbjct 2194615 ATCGCCGACTTCGGCCTCGCCCGCGTCAT-GGCGCGCGCCCACGAGACCGTCTCCGTCGT 2194557 Query 1347726 CACCG 1347730 | ||| Sbjct 2194556 CGCCG 2194552 Score = 93.3 bits (102), Expect = 5e-13 Identities = 99/130 (76%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1349432 CGGCCAAGGGCGTCGCCTACCTGCAC---GGTCTCGACCCGCCCATCGTGCACCGCGACC 1349488 ||||||||| | |||| ||||||||| | | ||||||||||| ||||||||| Sbjct 6208701 CGGCCAAGGCCATCGCGTACCTGCACTCGGAGGTGCACCCGCCCATCTACCACCGCGACA 6208760 Query 1349489 TCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCC 1349548 ||||| | ||||| | ||| ||||||| | |||||| |||||| |||||||| || | Sbjct 6208761 TCAAGTCCAGCAACATCCTGCTCGACCACGAGTACAACTCCAAGGTCGCCGACTTCGGGC 6208820 Query 1349549 TGGCGCGCAT 1349558 || |||| || Sbjct 6208821 TGTCGCGGAT 6208830 Score = 86.0 bits (94), Expect = 8e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 1572461 TCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGGTCGGCGTCGGTGTGG 1572520 ||||||| || ||| ||||| || | || || || || ||||| ||||| |||| Sbjct 24939493 TCGATGATCATCTGCGCGATCCGGTCGCCGGGCTTCACGGCGAAGTCGGTGTCGGAGTGG 24939552 Query 1572521 TTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGACG 1572580 |||||||| | ||| || ||| ||| || |||||||| ||||| || || ||||| ||| Sbjct 24939553 TTGAAGAGGATGACCCCTACCGGGCCACGGTAGTCGGCGTCGATCACCCCGGCGCCCACG 24939612 Query 1572581 TCGAT 1572585 ||||| Sbjct 24939613 TCGAT 24939617 >seq1 Length=39866532 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| || | | || Sbjct 2499443 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCGTGAGGTGA 2499502 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | ||| ||| | ||| |||| | Sbjct 2499503 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2499562 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2499563 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2499622 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2499623 GGACCTGCTTGAGCACCTTGAAGATG 2499648 Score = 125 bits (138), Expect = 9e-23 Identities = 156/210 (74%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCG---TGC 1254399 || |||| || |||||| | | || ||||| |||| ||||| ||||||||| | || Sbjct 15803659 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTAGATCTCGCGGGAGGTGG 15803718 Query 1254400 CGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCG 1254458 |||| | || |||||| || | || || || ||||||| ||| ||| ||| Sbjct 15803719 CGATGGGCTT---CTTGTTGTAGCGGGCGAGGTGGGCGGCCTCC-TGCGCGAGCTTCTCG 15803774 Query 1254459 ATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCG 1254518 | |||||||||| || |||||||||| |||||| | |||| ||||||||| | ||| Sbjct 15803775 AAGATGTCGTTGATGAAGGAGTTCATGATCGACATGGCCTTGGAGGAGATGCCGATGTCC 15803834 Query 1254519 GGGTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||| || |||||| ||||| Sbjct 15803835 GGGTGCACCTGCTTCAGGACCTTGAAGATG 15803864 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 2369454 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 2369395 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2369394 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2369335 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | ||||||| Sbjct 2369334 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATATCGGGGT 2369275 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2369274 GGACCTGCTTGAGCACCTTGAAGATG 2369249 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| ||||||||||||||||| || | | || Sbjct 2514355 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGCGGTCTGGATCTCCCGGGAGGTGA 2514414 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | ||| ||| | ||| |||| | Sbjct 2514415 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGACTCTCCGGCGAGCTTCTCGAAGA 2514474 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | || |||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2514475 TATCATTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2514534 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2514535 GGACCTGCTTGAGCACCTTGAAGATG 2514560 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||| ||||| || | | || Sbjct 2520967 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGAATCTCCCGGGAGGTGA 2521026 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | ||| ||| | ||| |||| | Sbjct 2521027 TGGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGACTCCCCGGCGAGCTTCTCGAAGA 2521086 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | |||||||| Sbjct 2521087 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGT 2521146 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||||||| ||||| Sbjct 2521147 GAACCTGCTTGAGCACCTTGAAGATG 2521172 Score = 87.8 bits (96), Expect = 2e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAGGCCATGAACGACATCAACGCGGCAGCGCGCCAG 292457 |||| |||||| | |||||| ||||||||||||||||||||||| ||||| | | Sbjct 20796923 ATCGTCCCCGACGAGGTGGTGCGGCGCGCCATGAACGACATCAACGCGGCGGCGCGGCTG 20796864 Query 292458 CGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493 ||| |||| || ||| |||||||||||||||||| Sbjct 20796863 CGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGACAAG 20796828 Score = 86.0 bits (94), Expect = 8e-11 Identities = 94/123 (76%), Gaps = 3/123 (2%) Strand=Plus/Minus Query 1349427 GTCGGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGA 1349486 |||||| ||| | || || | ||||| |||| |||| || ||||||||||||||||| Sbjct 26027653 GTCGGCCGCC--GCGC-TCACGTACCTCCACGCCATCGAGCCACCCATCGTGCACCGCGA 26027597 Query 1349487 CCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGG 1349546 | |||||| | |||| | || ||||| ||| | |||||||||| || |||||||| Sbjct 26027596 CGTCAAGACCACCAACATCCTCCTCGACGCCGACTTCCACGTCAAGGTCGCTGACTTTGG 26027537 Query 1349547 CCT 1349549 ||| Sbjct 26027536 CCT 26027534 >seq9 Length=20482102 Score = 123 bits (136), Expect = 3e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || |||||||| | ||||||||||||||| | | || Sbjct 16270121 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGA 16270062 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | || |||||| ||||||| | ||| |||| | Sbjct 16270061 TGGTCGGCTTCTTGTTGTAGCGGGCGAGACGGGCGGCCTCCTGGGCGAGCTTCTCGAAGA 16270002 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||||| ||||||||||||| |||||| | |||| ||||| || | ||||| | Sbjct 16270001 TATCGTTGATGAACGAGTTCATGATCGACATGGCCTTGGACGAGATCCCGATATCGGGAT 16269942 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| |||||| | ||| Sbjct 16269941 GCACCTGCTTGAGGACCTTGAAAATG 16269916 Score = 105 bits (116), Expect = 8e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||| |||||||| ||||| ||||| ||| || | ||||| || Sbjct 18849688 GCTGCAAACTACCTCAACATCAAGGGACTGCTGGATCTGACCTGCCAGACCGTGGCTGAC 18849629 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| Sbjct 18849628 ATGATCAAGGGGAAGACACCAGAGGAGATCCGCAAGACCTTCAACATCAAG 18849578 >seq8 Length=25958679 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || ||||| |||| |||||||||||| | | | || Sbjct 21915165 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCCCTGGAGGTGA 21915106 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| | || || | |||||||| | ||| |||| | Sbjct 21915105 TGGTGGGCTTCTTGTTGTACCTGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 21915046 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| ||||| | |||| |||||| || | ||| |||| Sbjct 21915045 TGTCGTTGATGAACGAGTTCATGATTGACATGGCCTTGGAGGAGATCCCGATGTCCGGGT 21914986 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||| ||||| Sbjct 21914985 GCACCTGCTTGAGCACCTTGAAGATG 21914960 >seq11 Length=27785585 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||| ||||||||| |||||||| |||| || ||| ||| || |||| || || Sbjct 14930134 GCCGCGAACTACCTCAACATCAAGGGGTTGCTGGACCTTACTTGCCAGACTGTTGCTGAC 14930193 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 14930194 ATGATCAAGGGGAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 14930248 >seq7 Length=26200591 Score = 102 bits (112), Expect = 1e-15 Identities = 125/168 (74%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 1592131 GTGGGACAAGGAGTTTTGCGACG---TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGC 1592187 ||||||| | || || ||||| | || ||| | ||||||| || | ||| || Sbjct 22655104 GTGGGACGAAGACTTCGTCGACGAGCTGGACCAGGACGCCCTCTTCGATGTCATCGCGGC 22655163 Query 1592188 CGCCAACTACCTCGACATCAA--GCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||||||||||| | ||||| ||||| || |||||| || ||| || Sbjct 22655164 CGCCAACTACCTCGACATCGATGGCCTC--CTCGACCTCACCTGCAAGAGGGTCGCCGAC 22655221 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 | ||||||||||||| | |||||||||||||||||| || |||||| Sbjct 22655222 ACGATCAAGGGCAAGACCCCCGAGGAGATCCGCAAGGAGTTCAACATC 22655269 Score = 93.3 bits (102), Expect = 5e-13 Identities = 167/238 (70%), Gaps = 16/238 (7%) Strand=Plus/Minus Query 1349440 GGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCTCAAGAGCGGC 1349499 ||| |||||||||| |||| | | ||||||||| | || |||||||||||| ||| | Sbjct 4173107 GGCCTCGCCTACCTCCACGCCCACTCGCCGCCCATCATCCATCGCGACCTCAAGTGCGAC 4173048 Query 1349500 AACCTGCTGGTCGACCAAAACTA---CAACGTCAAGGTGGCCGACTTTGGCCTGGCGCGC 1349556 ||| | | ||| || ||| | | | |||||| | | |||| | ||||| || ||| Sbjct 4173047 AACATCTTCGTCAACGGCAACCAGGGCGAGGTCAAGATCGGCGACCTCGGCCTCGC-CGC 4172989 Query 1349557 ATTAAG--GAGGACAACGCCACGATGACCCGCTG---CGGCACGCCCTGCTGGACGGCGC 1349611 || | | || |||||| ||||||| ||||||||| | | ||| | Sbjct 4172988 GTTCCGCCGCGGCGGCGGCCACG----CCCGCTGCGTCGGCACGCCGGAGTTCATGGCTC 4172933 Query 1349612 CCGAGGTCATACGCGGCGAGCGCTACGACGAGCGGGCCGACGTCTACTCATTTGGCAT 1349669 ||||||| || || |||| ||||||||||| |||||||||||||| || ||||| Sbjct 4172932 CCGAGGT-GTA--CGACGAGTCCTACGACGAGCTCGCCGACGTCTACTCCTTCGGCAT 4172878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106825877040306