Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq2 509 2e-139 seq8 452 5e-122 seq10 306 4e-78 seq4 188 9e-43 seq12 127 2e-24 seq6 91.5 2e-13 seq3 87.8 2e-12 >seq2 Length=33962743 Score = 509 bits (564), Expect = 2e-139 Identities = 719/1005 (72%), Gaps = 4/1005 (0%) Strand=Plus/Minus Query 178949 TGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179008 |||| |||||| | |||| || ||||| ||||| || |||||||| || | ||| Sbjct 13366827 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 13366768 Query 179009 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179068 |||| ||||||| | || | || |||||| |||| |||||| ||||||| || || Sbjct 13366767 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 13366708 Query 179069 GGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 179127 |||| |||||||| | || ||||||||| | |||||| || ||||||| | | ||| Sbjct 13366707 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGTAGCA 13366649 Query 179128 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179187 || || | ||||| || | | | || ||| | | ||||| ||||| || || | Sbjct 13366648 GTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 13366589 Query 179188 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCAC 179247 || ||| |||| || ||||| ||| | || || ||||||| ||| || |||||||| Sbjct 13366588 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCAT 13366529 Query 179248 GGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGG 179306 || || || || ||||| || |||||| | ||||| |||||||| || || ||| || Sbjct 13366528 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAA 13366469 Query 179307 TATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATT 179366 | | | ||||| ||||| ||| | || |||| || ||||| || || ||| ||||| Sbjct 13366468 T-TGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATT 13366410 Query 179367 TCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGC 179426 | || || ||||| || |||||| |||||||||||||||| ||||| || || || Sbjct 13366409 CCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 13366350 Query 179427 GATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCA 179486 ||| ||| ||||| | || ||||| ||||| || || || ||||| | ||||| ||||| Sbjct 13366349 GATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 13366290 Query 179487 CATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCATGGAGTAAC 179546 |||||||||||||| || | | || | |||||||| | ||||||||||| | ||| Sbjct 13366289 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAAC 13366230 Query 179547 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCGTTCGACTC 179606 || || || || | | ||| || || || |||| || ||| | || || | Sbjct 13366229 CGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCC 13366170 Query 179607 TACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTT 179666 || |||| || || || ||||| ||||| || || || || |||||||| || ||||| Sbjct 13366169 AACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 13366110 Query 179667 CGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCAT 179726 || ||| | ||| |||||| |||||||| || ||||||| ||| ||||| || |||| Sbjct 13366109 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCAC 13366050 Query 179727 GGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGA 179786 ||| | ||| | | |||||||| | | || || ||||| || || | ||| ||||| Sbjct 13366049 CGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGA 13365990 Query 179787 TTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAA 179846 || || || || ||| | ||||| ||||||||||| || ||||| ||||| || || Sbjct 13365989 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 13365930 Query 179847 GAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGA 179906 || |||||| | || | || | ||||| ||| ||||| || ||||| || ||||| Sbjct 13365929 AAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 13365870 Query 179907 AAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||| | || ||||| || || || | ||| |||| ||||| || Sbjct 13365869 AAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT 13365825 Score = 161 bits (178), Expect = 1e-34 Identities = 224/314 (71%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 179479 CCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGCTATTCAT 179538 || ||||| |||||||||||||| || | | || | |||||||| | ||||||||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 179539 GGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTTAAAGCG 179598 || | ||| || || || || | | ||| || || || ||||| || || || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 179599 TTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCG 179658 || || | || |||| || || || ||||| ||||| || || || || |||||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 179659 CAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTT 179718 || ||||| || ||| | ||| |||||| |||||||| || ||||||| ||| ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 179719 CCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGT 179778 || |||| ||| | ||| | | |||||||| | | || || ||||| || || ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 179779 GCTTATGATTTTGT 179792 || ||||| || || Sbjct 18365241 GCCTATGACTTCGT 18365254 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 179797 CAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTT 179856 || || ||| | ||||| ||||||||||| || ||||| ||||| || || || |||||| Sbjct 13367213 CAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 13367272 Query 179857 CTGAATGAAGGACTACGTGCTTGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATC 179916 | || || || | ||||| ||| ||||| || ||||| || |||||||| | || Sbjct 13367273 TTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATA 13367332 Query 179917 TTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||||| || || || ||||| |||| ||||| || Sbjct 13367333 TTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCT 13367367 >seq8 Length=25958679 Score = 452 bits (500), Expect = 5e-122 Identities = 696/991 (70%), Gaps = 28/991 (3%) Strand=Plus/Plus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCGTCGCTGCTCCC 177677 || || || || | | | | |||||| | || || |||||||| || |||| || Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTTTGTATTTATTATCGCCTTCATCACTGCCCCT 20127931 Query 177678 CCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAAC 177737 | |||| ||| || |||||| | | || || ||||| Sbjct 20127932 CTCGTGAGCAT-------------------GTTTCTGGTTTTTTACTTTACGGAAACAAT 20127972 Query 177738 ATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATC 177797 || ||||||||||| || | || |||| || || || | ||||| || || || Sbjct 20127973 ATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATT 20128032 Query 177798 TGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTC 177857 |||||||| ||||| ||||||||||| | || || || ||||||| | || | || Sbjct 20128033 TGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 20128092 Query 177858 TTTCACTTCCTTATCGGCATCTATGCAT---ATATGGGACGTGAGTGGGAACTTTCATAC 177914 | |||||| | | || | || || | ||||||| |||||||||||||| | | Sbjct 20128093 CTACACTTCTTACTTGG--TGTA-GCTTGTCATATGGGTCGTGAGTGGGAACTGAGTTTC 20128149 Query 177915 CGTCTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCC 177974 ||||| |||||||| || ||||| ||||||||| || || |||||||| || || | Sbjct 20128150 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACT 20128209 Query 177975 GCAGTCTTTCTAG-TCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGG 178033 || || ||||| | || ||| | |||||||| ||||| |||| ||||||| | || Sbjct 20128210 GCTGT-TTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 20128268 Query 178034 TATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCA 178093 || ||||||||||| |||| ||| |||||||||| ||||| || || ||||||||||| Sbjct 20128269 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 20128328 Query 178094 CCCGTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCA 178153 || || |||||| | ||||| ||||| |||||||| || || || ||| ||||||||| Sbjct 20128329 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 20128388 Query 178154 TGGAAGTCTCGTTACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTA 178213 ||| | || || ||| | || | || || || |||| || || || | Sbjct 20128389 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 20128448 Query 178214 TGGTTACAAGTTCGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTT 178273 ||||||| || || ||||| ||||| || ||||| || || || || |||||||| || Sbjct 20128449 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 20128508 Query 178274 CGGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCT 178333 || || || |||||||||||||| || |||||||| ||||| | ||||||||| | Sbjct 20128509 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTT 20128568 Query 178334 CGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATT 178393 | ||| ||||||||||| || || |||||||| || | ||| | || ||||| || Sbjct 20128569 GGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 20128628 Query 178394 TAACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAA 178453 || || || |||||||| |||||||| || | | || | ||||| || || | || Sbjct 20128629 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 20128688 Query 178454 CACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAA 178513 || ||||| || | |||||||||| ||| || |||||||| ||||||||| | || Sbjct 20128689 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 20128748 Query 178514 TAGCACATAACTTCCCGCTTGATCTTGCAGC 178544 | || || |||||||| || || || || || Sbjct 20128749 T-GCTCACAACTTCCCTCTAGACCTAGCTGC 20128778 >seq10 Length=20731201 Score = 306 bits (338), Expect = 4e-78 Identities = 432/605 (71%), Gaps = 13/605 (2%) Strand=Plus/Plus Query 177941 TGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTAG-TCTATCCTTTCG 177999 ||||||||| || || ||||||||||| || | || || ||||| | | || ||| | | Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTTGATTTACCCTATTG 18975709 Query 178000 GTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGC 178059 ||||||| |||| |||| ||||||| | || || ||||||||||| |||| ||| Sbjct 18975710 GTCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGA 18975769 Query 178060 TTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTCGGTGTTGCTG 178119 |||||||||| ||||| || || ||||||||||| | || |||||| | ||||| |||| Sbjct 18975770 TTGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTG 18975829 Query 178120 GGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGTTACTTCTTCGCTCG 178179 | |||||||| || || || || |||||||||||| | || || ||| | Sbjct 18975830 GTGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGA 18975889 Query 178180 TCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGACAAGAAGAAG 178239 || | || || || |||| || || || | ||||||| || || ||||| |||| Sbjct 18975890 TCGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAG 18975949 Query 178240 AAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCAT 178299 | || ||||| || || || || |||||||| || || || || |||||||||||||| Sbjct 18975950 AGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTA 18976009 Query 178300 CGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCT 178359 || |||||||| || || | ||||||||| | || || ||||||||||| || || | Sbjct 18976010 GTTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTT 18976069 Query 178360 GGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGGATTCAACTTCAACC 178419 |||||| || | ||| | || ||||| || || || || |||||||| ||||||| Sbjct 18976070 GGTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACC 18976129 Query 178420 AGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTG 178479 | | | | || | ||| | || || ||||| || | ||||||||| Sbjct 18976130 AATATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTG 18976179 Query 178480 CCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACTTCCCGCTTGATCTT 178539 | ||| || |||||||| ||||||||| | ||| || || |||||||| || || || Sbjct 18976180 CTAATCTTGGTATGGAAGTAATGCACGAACGTAAT-GCTCACAACTTCCCTCTAGACCTA 18976238 Query 178540 GCAGC 178544 || || Sbjct 18976239 GCTGC 18976243 Score = 149 bits (164), Expect = 8e-31 Identities = 133/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 177990 TATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTT 178049 || ||| | |||||||| ||||| |||| ||||||| | || || ||||||||||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 178050 AACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACATGCTC 178109 |||| ||| |||||||||| ||||| || || ||||||||||| || || |||||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 178110 GGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGG 178156 ||||| ||||| |||||||| || || || ||| |||||||||||| Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 9553490 >seq4 Length=30521686 Score = 188 bits (208), Expect = 9e-43 Identities = 225/303 (74%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 179203 CGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTA 179262 || ||||| ||| | || || || |||| ||| || |||||||| || || || || ||| Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 179263 ATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAA 179321 || || |||||| | |||| |||||||| | || ||| || | | || ||||| || Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAA 19658402 Query 179322 TGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACT 179381 ||| ||| | || |||| || || || | || ||| ||||| || || || ||||| Sbjct 19658401 TGCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACT 19658342 Query 179382 TGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGATCTTTAGATTCCT 179441 || |||||| |||||||||||||||| ||||| || || ||||| ||| ||||| | Sbjct 19658341 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCAT 19658282 Query 179442 ACTTTTCTTACAAGGTTTCCACAACTGGACACTCAACCCCTTTCACATGATGGGAGTTGC 179501 || ||||| ||||| || || || ||||| | ||||| ||||| |||||||||||||| Sbjct 19658281 CCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGC 19658222 Query 179502 AGG 179504 || Sbjct 19658221 CGG 19658219 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 179203 CGGTGGTGCCAACTTGGGGGACTATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTA 179262 || ||||| ||| | || || || |||| ||| || |||||||| || || || || ||| Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 179263 ATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG-TCTCATCGGTATCCGTCCTTACAA 179321 || || |||||| | ||||| |||||||| || || ||| || | | || ||||| || Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAA 7261339 Query 179322 TGCGATTGCTTTTACTGGTCCTATTGCCGTATTCGTTAGTGTATTTCTCATCTACCCACT 179381 ||| ||| | || |||| || || || || || ||| ||||| || || || ||||| Sbjct 7261340 TGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACT 7261399 Query 179382 TGGACAATCCAGTTGGTTCTTTGCGCCATCGTTTGGTGTTGCGGCGAT 179429 || |||||| |||||||||||||||| ||||| || || ||||| Sbjct 7261400 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 127 bits (140), Expect = 2e-24 Identities = 202/287 (70%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 177558 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177617 |||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 177618 ATGATTCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCC 177676 ||||| || || | ||| | |||||| |||| || || |||||||| ||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 177677 CCCCGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 177736 || | || || || || || ||||| | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 177737 CATCATCTCTGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 177796 || ||||||||| | || | || |||| | || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 177797 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 177843 |||||||| ||||| ||||||||||| | || || || ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 178338 GCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAAC 178397 || ||||||||||| || || |||||||| || | ||| | || ||||| || || Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 178398 CTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACA 178457 || || |||||||| |||||| | || | | || | ||||| || || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 178458 TGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGC 178517 ||||| || | |||| ||||| ||| || |||| ||| || |||||| | |||| | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATA-C 9700909 Query 178518 ACATAACTTCCCGCTTGATCTTGCAGC 178544 || |||||||| || || || || || Sbjct 9700910 TCACAACTTCCCTCTAGACCTAGCTGC 9700936 >seq6 Length=27870862 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 178265 TGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCA 178324 |||||| || || || || |||||||||||||| || |||||||| ||||| | || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 178325 CTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCAC 178384 ||||||| | || || ||||||||||| || || |||||||| || | ||| | || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 178385 CATGGCATTTAACCTCAA 178402 ||||| || || || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 >seq3 Length=34446443 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 138538 TACATCCTTGATGCTGCTGATGAAGCAGGTATTGATCTTCCCTACTCCTGTCGTGCTGGT 138597 |||||||||||||| || || || || | || ||||||||||| || |||||||| Sbjct 33286541 TACATCCTTGATGCCGCCGAGACCGCTGGAGTGGAGCTTCCCTACTCATGCCGTGCTGGA 33286600 Query 138598 GCATGTTCTACCTGTGCTGGTAAATTAGTTGAAGGAACTGTAGATCAGTCTGACCAGTCT 138657 ||||| ||||||||||| ||||| | | | || | || || ||||| || || Sbjct 33286601 GCATGCTCTACCTGTGCCGGTAAGATCGAGGCTGGCTCCGTCGACCAGTCGGATGGATCA 33286660 Query 138658 TTCCTTGATGATG 138670 ||||||||||||| Sbjct 33286661 TTCCTTGATGATG 33286673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605638294532880