Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq8 522 3e-143 seq2 522 3e-143 seq10 367 1e-96 seq4 190 2e-43 seq12 158 1e-33 seq6 123 3e-23 >seq8 Length=25958679 Score = 522 bits (578), Expect = 3e-143 Identities = 714/992 (72%), Gaps = 29/992 (3%) Strand=Plus/Plus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078 || || || || | | | | ||||| | ||| || || |||||||| || |||| Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTT-TGTATTTATTATCGCCTTCATCACTGC--- 20127927 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 |||| | ||||| | || |||||| | | || || ||||| Sbjct 20127928 CCCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 20127971 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 || ||||||||||| || |||| |||| || || || | ||||| || || || Sbjct 20127972 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 20128031 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 160258 |||||||| ||||| ||||||||||| | || || || ||||||| | || | || Sbjct 20128032 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 20128091 Query 160259 ATTTCACTTCCTTATCGGCATCTATGCAT---ATATGGGACGTGAGTGGGAACTTTCATA 160315 | |||||| | | || | || || | ||||||| |||||||||||||| | Sbjct 20128092 TCTACACTTCTTACTTGG--TGTA-GCTTGTCATATGGGTCGTGAGTGGGAACTGAGTTT 20128148 Query 160316 CCGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATC 160375 |||| | |||||||| || ||||| ||| |||||||| ||||| || || || || | Sbjct 20128149 CCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTAC 20128208 Query 160376 TGCTGTATTCCTCGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGG 160435 |||||| ||| | || ||| | |||||||| |||||| |||| ||||||| | || Sbjct 20128209 TGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 20128268 Query 160436 TATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCA 160495 || ||||||||||| |||| ||| |||||||||| ||||| || || ||||||||||| Sbjct 20128269 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 20128328 Query 160496 TCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCA 160555 ||| || |||||| | || || ||||| |||||||| || || | ||| ||||||||| Sbjct 20128329 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 20128388 Query 160556 CGGAAGTCTCGTTACTTCCTCACTCGTTC-GTGAAACGACTGAAACAGAGTCACAGAACT 160614 || | || || || | | | || | ||||| ||||||| || || || Sbjct 20128389 TGGTTCCTTGGTAACCTC-TAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATG 20128447 Query 160615 ACGGTTATAAGTTCGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACT 160674 | ||||| | || ||||||||||||||||| || || || || || || |||||||| | Sbjct 20128448 AGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATT 20128507 Query 160675 TCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCC 160734 | || || || |||||||||||||| || |||||||| ||||| | ||||||||| Sbjct 20128508 TTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCT 20128567 Query 160735 TGGCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCAT 160794 ||| ||| ||||||||||| || || |||||||||||| | ||| |||| || ||||| | Sbjct 20128568 TGGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTT 20128627 Query 160795 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGA 160854 |||| || ||||| ||||| |||||||| || | | ||| | |||||||| || | | Sbjct 20128628 TCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTA 20128687 Query 160855 ACACCTGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTA 160914 | || ||||| || | | || |||||| ||||||||||||||| ||||| || |||| Sbjct 20128688 ATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTA 20128747 Query 160915 ACGCACACAACTTCCCACTCGACCTCGCTGCT 160946 | || ||||||||||| || ||||| |||||| Sbjct 20128748 ATGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq2 Length=33962743 Score = 522 bits (578), Expect = 3e-143 Identities = 731/1021 (72%), Gaps = 6/1021 (1%) Strand=Plus/Minus Query 161688 TTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGGTCTGGA 161747 ||||| || | ||||||||| | | |||| ||||| |||||||| || |||||||| Sbjct 13366837 TTTGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGC 13366778 Query 161748 CTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCACAACTTTC 161807 || | ||| |||| ||||||| | ||| | || |||||| |||| || |||||||| Sbjct 13366777 CTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTT 13366718 Query 161808 GCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGT-GCAAACTTTCT 161866 | ||| |||||||||||||| | || ||||||||| | || ||| |||| ||||| Sbjct 13366717 GTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA--TTTCT 13366660 Query 161867 TACAGCGT--CAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGG 161924 || | ||| ||||| | | || || | | | | || ||| | | || || ||| Sbjct 13366659 TA-ACCGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGG 13366601 Query 161925 GGTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAATTTT 161984 || || || || ||||||||||| || ||| ||| | || || || |||| |||| Sbjct 13366600 GGCCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTT 13366541 Query 161985 GTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACTGGCA 162044 || || |||||||| || || || ||||| || |||||| | ||||| |||||||| || Sbjct 13366540 GTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCT 13366481 Query 162045 CGTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTT 162104 || | || | | || || ||||| ||| | |||||||| || |||||||||||| Sbjct 13366480 CGATCTGTTCAATTGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTT 13366421 Query 162105 GTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTT 162164 || ||| |||| || || ||| |||| || ||| ||||||| || || ||| ||| Sbjct 13366420 GTTTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTT 13366361 Query 162165 GGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTTCAAGGATTCCATAACTGGACCCTG 162224 || || ||||| || ||| ||||| | | || | |||||||| ||||| ||||| || Sbjct 13366360 GGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTG 13366301 Query 162225 AACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATT 162284 ||||| || ||||||||||||||||| || || |||| | || || |||| |||||| Sbjct 13366300 AACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATT 13366241 Query 162285 CACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAG 162344 || || | || || ||||| || ||| ||||| || || |||| |||||| Sbjct 13366240 CATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGC 13366181 Query 162345 GCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGG 162404 | ||| | | || || | ||||| |||||||| |||||||| || || ||||| ||| Sbjct 13366180 ACTTTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGG 13366121 Query 162405 TCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTT 162464 || || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| | ||| Sbjct 13366120 TCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTT 13366061 Query 162465 GTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTT 162524 || || || | ||| |||||| |||||||| | | || || ||||| ||||| Sbjct 13366060 GTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTA 13366001 Query 162525 CGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACG 162584 | ||| || || ||||| ||||| ||| | ||||| ||||||||||| ||||| || Sbjct 13366000 CTTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACT 13365941 Query 162585 TTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGAC 162644 |||||||| || || ||||| | || | || | ||||| ||| | ||| || || Sbjct 13365940 TTCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGAT 13365881 Query 162645 CAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAA 162704 || || ||||| || |||| ||||| || || |||| || | || ||||| |||||| Sbjct 13365880 CAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCTTTAA 13365821 Query 162705 T 162705 | Sbjct 13365820 T 13365820 Score = 170 bits (188), Expect = 2e-37 Identities = 226/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 162228 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTGCTATTCAC 162287 || || ||||||||||||||||| || || |||| | || || |||| |||||||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 162288 GGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCTTTAAGGCG 162347 || | || || ||||| || ||| ||||| || || ||||| ||||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 162348 TTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCG 162407 ||| | | || || | ||||| |||||||| |||||||| || || ||||| ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 162408 CAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTG 162467 || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 162468 CCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGT 162527 || || | ||| |||||| |||||||| | | || || ||||| ||||| ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 162528 GCTTACGATTTCGT 162541 || || || ||||| Sbjct 18365241 GCCTATGACTTCGT 18365254 Score = 104 bits (114), Expect = 3e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 162546 CAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTG 162605 ||||| ||| | ||||| ||||||||||| ||||| || |||||||| || || ||||| Sbjct 13367213 CAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 13367272 Query 162606 CTCAATGAAGGACTACGTGCATGGTTAGCACCTGCCGACCAACCCCATGAGAACTTTATC 162665 | || || || | ||||| ||| | ||| || || || || ||||| || |||| Sbjct 13367273 TTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATA 13367332 Query 162666 TTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCCTTTAAT 162705 ||||| || || ||||| || | || ||||| ||||||| Sbjct 13367333 TTCCCTGAGGAGGTTCTACCACGTGGAAACGCTCTTTAAT 13367372 Score = 102 bits (112), Expect = 9e-17 Identities = 124/168 (74%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 160758 ATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 160817 || |||||||||||| | ||| |||| || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 160818 AACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAAT 160877 ||||| || | | ||| | |||||||| || | | || ||||| || | | || Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 160878 CGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 160925 ||||| ||||| ||||||||| ||||| || ||||| || ||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 367 bits (406), Expect = 1e-96 Identities = 445/605 (74%), Gaps = 12/605 (2%) Strand=Plus/Plus Query 160343 TGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCTCGTATATCCTTTCGG 160402 ||| |||||||| ||||| || || || || ||||||| ||| | | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 160403 TCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCT 160462 |||||| ||||| |||| ||||||| | || || ||||||||||| |||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 160463 TGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGCGTTGCTGG 160522 ||||||||| ||||| || || ||||||||||||| || |||||| | || || ||||| Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 160523 GGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCACTCGT 160582 |||||||| || || | || ||||||||| || | || || || | | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGA 18975889 Query 160583 TCGTG-AAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAGGAAG 160641 ||| | |||| ||||||| || || || | ||||| | || ||||||||||||| Sbjct 18975890 TCGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAG 18975949 Query 160642 AGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCAT 160701 |||| || || || || || || |||||||| || || || || |||||||||||||| Sbjct 18975950 AGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTA 18976009 Query 160702 CATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCT 160761 || |||||||| || || | ||||||||| |||| || ||||||||||| || || | Sbjct 18976010 GTTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTT 18976069 Query 160762 GGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACC 160821 |||||| |||| | ||| |||| || ||||| ||||| || ||||| ||||| ||||||| Sbjct 18976070 GGTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACC 18976129 Query 160822 AGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACCTGGGCAGACGTACTGAATCGTG 160881 | | | | ||| | ||| | || || ||||| || | | || |||| Sbjct 18976130 AATATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTG 18976179 Query 160882 CTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTCG 160941 || ||||||||||||||| ||||| || ||||| || ||||||||||| || ||||| | Sbjct 18976180 CTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAG 18976239 Query 160942 CTGCT 160946 ||||| Sbjct 18976240 CTGCT 18976244 Score = 143 bits (158), Expect = 3e-29 Identities = 132/167 (79%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 160392 TATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTT 160451 || ||| | |||||||| |||||| |||| ||||||| | || || ||||||||||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 160452 AACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTC 160511 |||| ||| |||||||||| ||||| || || |||||||||||||| || |||||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 160512 GGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGG 160558 || || ||||| |||||||| || || | ||| ||||||||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 9553490 >seq4 Length=30521686 Score = 190 bits (210), Expect = 2e-43 Identities = 225/305 (74%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 161961 CAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTC 162020 ||| | || || || |||| |||||| || |||||||| || || || ||||| || ||| Sbjct 19658511 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 19658452 Query 162021 ATGCTCCGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCCTACAATGCTATTGCG 162080 ||| | |||| |||||||| | || | || | || || || ||||| ||| | Sbjct 19658451 ATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCA 19658392 Query 162081 TTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCC 162140 |||||||| || || ||| ||||||| ||| ||||| || || ||| |||| || ||| Sbjct 19658391 TTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCC 19658332 Query 162141 AGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTT 162200 ||||||| || || ||| ||||| || ||||| || ||| ||||| | | || | Sbjct 19658331 GGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTC 19658272 Query 162201 CAAGGATTCCATAACTGGACCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTA 162260 |||||||| ||||| ||||| ||||||| || ||||||||||||||||| || || || Sbjct 19658271 CAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTA 19658212 Query 162261 GGTGG 162265 || || Sbjct 19658211 GGCGG 19658207 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 161961 CAACTTGGGGGACTCTGGAATTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTC 162020 ||| | || || || |||| |||||| || |||||||| || || || ||||| || ||| Sbjct 7261230 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 7261289 Query 162021 ATGCTCCGTCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCCTACAATGCTATTGCG 162080 ||| | ||||| |||||||| || || | || | || || || ||||| ||| | Sbjct 7261290 ATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCA 7261349 Query 162081 TTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCC 162140 |||||||| || || ||||||||||| ||| ||||| || || ||| |||| || ||| Sbjct 7261350 TTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCC 7261409 Query 162141 AGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAAT 162178 ||||||| || || ||| ||||| || ||||| || Sbjct 7261410 GGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 158 bits (174), Expect = 1e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 160740 GCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAAC 160799 || ||||||||||| || || |||||||||||| | ||| |||| || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 160800 CTCAACGGTTTCAACTTCAACCAGTCCATCCTCGATGGTCAAGGTCGTGTACTGAACACC 160859 || ||||| ||||| |||||| | || | | ||| | |||||||| || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 160860 TGGGCAGACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCA 160919 ||||| || | | ||||||||| ||||||||||| ||| || || || ||||| | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 160920 CACAACTTCCCACTCGACCTCGCTGCT 160946 ||||||||||| || ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 Score = 132 bits (146), Expect = 5e-26 Identities = 203/287 (71%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 159960 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 160019 |||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 160020 ATGATTCCAACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 160078 ||||| || || | ||| | ||||| ||||| || || |||||||| ||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 160079 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 160138 || | || || || || || ||||| | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 160139 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160198 || ||||||||| | || |||| |||| | || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 160199 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 160245 |||||||| ||||| ||||||||||| | || || || ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 >seq6 Length=27870862 Score = 123 bits (136), Expect = 3e-23 Identities = 110/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 160667 TGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCA 160726 |||||| || || || || |||||||||||||| || |||||||| ||||| | || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 160727 CTTCTTCCTGGCAGCATGGCCTGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCAC 160786 ||||||| |||| || ||||||||||| || || |||||||||||| | ||| |||| || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 160787 CATGGCATTCAACCTCAA 160804 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559477297671600