Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq8 502 3e-137 seq2 468 6e-127 seq10 358 8e-94 seq4 161 1e-34 seq12 136 5e-27 seq6 98.7 1e-15 >seq8 Length=25958679 Score = 502 bits (556), Expect = 3e-137 Identities = 707/990 (71%), Gaps = 27/990 (3%) Strand=Plus/Plus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099 || || || || | | | | |||||| | ||| || || |||||||| || |||| Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTT-TGTATTTATTATCGCCTTCATCACTGC--- 20127927 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 |||| | ||||| | || |||||| | | || || ||||| Sbjct 20127928 CCCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 20127971 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 || ||||||||||| || |||| |||| || || || | ||||| || || || Sbjct 20127972 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 20128031 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 181279 |||||||| ||||| ||||||||||| | || || || ||||||| | || | || Sbjct 20128032 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 20128091 Query 181280 CTTTCACTTCCTTATCGGCAT---TTATGCATACATGGGACGTGAATGGGAACTCTCTTA 181336 | |||||| | | || | || | |||| |||| ||||| |||||||| || Sbjct 20128092 TCTACACTTCTTACTTGGTGTAGCTTGT-CATA--TGGGTCGTGAGTGGGAACTGAGTTT 20128148 Query 181337 CCGCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATC 181396 ||| | |||||||| || ||||| ||||||||| || ||||| || || || || | Sbjct 20128149 CCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTAC 20128208 Query 181397 TGCTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGG 181456 |||||| ||| | || ||| | |||||||| ||||||||| | ||||| | || Sbjct 20128209 TGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 20128268 Query 181457 CATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCA 181516 || |||||||| ||||||| ||| |||| ||||| |||||||| ||||| || ||||| Sbjct 20128269 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 20128328 Query 181517 TCCCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCA 181576 ||| || |||||||| ||||| || |||||||| || ||||| || |||||||| ||||| Sbjct 20128329 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 20128388 Query 181577 CGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTA 181636 ||||| ||||| || ||| | || | || || ||||||| || || || | Sbjct 20128389 TGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGA 20128448 Query 181637 TGGTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTT 181696 ||||||| || || ||||| |||||||| || || || || ||||| || ||||| || Sbjct 20128449 GGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTT 20128508 Query 181697 TGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCT 181756 ||| || || ||||||||||||||| || |||||||| ||||| | ||||||||| | Sbjct 20128509 TGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTT 20128568 Query 181757 CGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATT 181816 | ||| ||||||||||| || || |||||||| || | || | || || ||||| || Sbjct 20128569 GGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTT 20128628 Query 181817 TAACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAA 181876 || || || |||||||| |||||||| ||| | | || | ||||| || || | || Sbjct 20128629 CAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAA 20128688 Query 181877 CACCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAA 181936 || ||||| || | |||||||||| ||| || |||||||| |||||||| || || Sbjct 20128689 TACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAA 20128748 Query 181937 CGCGCACAACTTCCCGCTTGATCTTGCAGC 181966 || ||||||||||| || || || || || Sbjct 20128749 TGCTCACAACTTCCCTCTAGACCTAGCTGC 20128778 >seq2 Length=33962743 Score = 468 bits (518), Expect = 6e-127 Identities = 710/1005 (71%), Gaps = 4/1005 (0%) Strand=Plus/Minus Query 182371 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 182430 ||||||||||| | | |||| || ||||| ||||| || |||||||| || | ||| Sbjct 13366827 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 13366768 Query 182431 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 182490 |||| ||||||| | || | || |||||| |||| |||||| ||||||| || || Sbjct 13366767 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 13366708 Query 182491 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 182549 |||| ||||| || | || ||||||| | |||||| || ||||||| | | ||| Sbjct 13366707 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGTAGCA 13366649 Query 182550 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 182609 || || | ||||| || | | | || ||| | | ||||| ||||| || || | Sbjct 13366648 GTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 13366589 Query 182610 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 182669 || ||| |||| || ||||| ||| | || || || |||| ||| || |||||||| Sbjct 13366588 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCAT 13366529 Query 182670 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 182728 || || || || || || ||||||||| | | ||||||||||||||||| ||| || Sbjct 13366528 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTG-TTCA 13366470 Query 182729 AATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTT 182788 | | | ||||| ||||| ||| | || ||||| || |||||||| || || || || Sbjct 13366469 ATTGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATT 13366410 Query 182789 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 182848 || || ||||| |||| || ||| |||||| || |||||| ||||| || || || Sbjct 13366409 CCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 13366350 Query 182849 GATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCA 182908 ||| || | ||| | | ||| | || || || || || ||||| | ||||| || || Sbjct 13366349 GATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 13366290 Query 182909 TATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCAC 182968 ||||||||||||||| || || | || | || ||||| | ||||| ||||| | || Sbjct 13366289 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAAC 13366230 Query 182969 AGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTC 183028 || || || || | | ||| || || || |||| || ||| | || | | Sbjct 13366229 CGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCC 13366170 Query 183029 CACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTT 183088 ||||| | || || || ||||| ||||| || || ||||| |||||||| |||||||| Sbjct 13366169 AACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 13366110 Query 183089 CGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCAT 183148 || ||||| ||| |||||| |||||||| || ||||||||| | ||||| || |||| Sbjct 13366109 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCAC 13366050 Query 183149 GGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGA 183208 ||| | ||| | | ||||||| | | || || ||||| || || | ||| ||||| Sbjct 13366049 CGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGA 13365990 Query 183209 TTTTGTGAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAA 183268 || || || || || | ||||| ||||||||||| || ||||| |||||||| || Sbjct 13365989 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 13365930 Query 183269 GAACATCCTTCTCAATGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGA 183328 || || ||| | || | || | ||||| ||| ||||| || ||||| || ||||| Sbjct 13365929 AAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 13365870 Query 183329 AAACTTCATCTTCCCTGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||| | || |||||||| || |||| ||| | || ||||| || Sbjct 13365869 AAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT 13365825 Score = 156 bits (172), Expect = 5e-33 Identities = 223/314 (71%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 182901 CCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTGCTATCCAT 182960 || || ||||||||||||||||| || || | || | || ||||| | ||||| ||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 182961 GGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACATTTAAAGCG 183020 || | || || || || || | | ||| || || || ||||| || || || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 183021 TTCGATTCCACTCAGGAGGAGGAGACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCA 183080 || | | ||||| | || || || ||||| ||||| || || ||||| |||||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 183081 CAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTT 183140 |||||||| || ||||| ||| |||||| |||||||| || ||||||||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 183141 CCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATTGGGCTTGCTCTTAATCTTCGT 183200 || |||| ||| | ||| | | ||||||| | | || || ||||| || || ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 183201 GCTTATGATTTTGT 183214 || ||||| || || Sbjct 18365241 GCCTATGACTTCGT 18365254 Score = 105 bits (116), Expect = 8e-18 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 183231 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGA 183290 ||||| ||||||||||| || ||||| |||||||| || || || ||| | || || || Sbjct 13367225 GCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTTTTAAACGAGGGT 13367284 Query 183291 CTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAA 183350 | ||||| ||| ||||| || ||||| || |||||||| | || |||||||| || Sbjct 13367285 ATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATATTCCCTGAGGAG 13367344 Query 183351 GTTCTACCTAGAGGTAACGCACT 183373 |||||||| | || ||||| || Sbjct 13367345 GTTCTACCACGTGGAAACGCTCT 13367367 >seq10 Length=20731201 Score = 358 bits (396), Expect = 8e-94 Identities = 440/603 (73%), Gaps = 10/603 (2%) Strand=Plus/Plus Query 181364 TGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTGCTGTATTCCTAGTCTATCCTTTCGG 181423 ||||||||| || ||||| || ||||| || ||||||| ||| | | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 181424 TCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCT 181483 |||||| ||||| ||| | ||||| | || || |||||||| ||||||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 181484 TGTTTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGG 181543 ||| ||||| ||||| || ||||| || ||||||| || |||||||| ||||| || || Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 181544 TGTATTTGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGT 181603 |||||| || ||||| || || ||||| ||||| ||||| ||||| || ||| | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 181604 CCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGA 181663 | | || || ||||||| || || || | ||||||| || || ||||| ||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 181664 GACATACAACATCGTCGCCGCCCACGGTTACTTTGGTCGCTTGATCTTCCAATATGCTTC 181723 ||| || || || || ||||| || ||||| ||||| || || ||||||||||||||| Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 181724 ATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTG 181783 || |||||||| || || | ||||||||| | || || ||||||||||| || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 181784 GTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCA 181843 ||||| || | || | || || ||||| || || || || |||||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 181844 GTCTATCCTCGACGGACAAGGACGTGTCCTCAACACCTGGGCAGACGTGCTCAACCGTGC 181903 | | | | || | ||| | || || ||||| || | |||||||||| Sbjct 18976131 ATATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTGC 18976180 Query 181904 CGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGC 181963 ||| || |||||||| |||||||| || || || ||||||||||| || || || || Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 18976240 Query 181964 AGC 181966 || Sbjct 18976241 TGC 18976243 >seq4 Length=30521686 Score = 161 bits (178), Expect = 1e-34 Identities = 219/303 (72%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 182625 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTC 182684 || ||||| ||| | || || || |||| ||| || |||||||| || || || || || Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 182685 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGGAATCAGACCTTACAA 182743 || ||||||||| | | |||||||||||| |||| ||| || | | | ||||| || Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTG-TTCAATTGCGGCCTTATAA 19658402 Query 182744 TGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTT 182803 ||| ||| | || ||||| || || ||| | || || || ||||| || ||||| | Sbjct 19658401 TGCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACT 19658342 Query 182804 GGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCCT 182863 ||| || ||| |||||| || |||||| ||||| || || ||||| || | ||| | Sbjct 19658341 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCAT 19658282 Query 182864 GTTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGC 182923 | ||| | || || || || || ||||| | ||||| || ||||||||||||||||| Sbjct 19658281 CCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGC 19658222 Query 182924 TGG 182926 || Sbjct 19658221 CGG 19658219 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 182625 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTC 182684 || ||||| ||| | || || || |||| ||| || |||||||| || || || || || Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 182685 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTC-GCCTGATTGGAATCAGACCTTACAA 182743 || ||||||||| | | |||||||||||||||| | ||| || | | | ||||| || Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTG-TTCAATTGCGGCCTTATAA 7261339 Query 182744 TGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTT 182803 ||| ||| | || ||||| || || ||||| || || || ||||| || ||||| | Sbjct 7261340 TGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACT 7261399 Query 182804 GGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGAT 182851 ||| || ||| |||||| || |||||| ||||| || || ||||| Sbjct 7261400 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 136 bits (150), Expect = 5e-27 Identities = 204/287 (71%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 180981 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 181040 |||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 181041 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 181099 ||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 181100 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAA 181159 || | || || || || || ||||| | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 181160 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 181219 || ||||||||| | || |||| |||| | || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 181220 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 181266 |||||||| ||||| ||||||||||| | || || || ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 Score = 105 bits (116), Expect = 8e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 181761 GCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAAC 181820 || ||||||||||| || || |||||||| || | || | || || ||||| || || Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 181821 CTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACACC 181880 || || |||||||| |||||| | ||| | | || | ||||| || || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 181881 TGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCG 181940 ||||| || | |||| ||||| ||| || |||| ||| || ||||| || || | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 181941 CACAACTTCCCGCTTGATCTTGCAGC 181966 ||||||||||| || || || || || Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGC 9700936 >seq6 Length=27870862 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 181689 GGTTACTTTGGTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCAC 181748 ||||| || || || || ||||||||||||||| || |||||||| ||||| | ||| Sbjct 8615183 GGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 8615124 Query 181749 TTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACC 181808 |||||| | || || ||||||||||| || || |||||||| || | || | || || Sbjct 8615123 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 8615064 Query 181809 ATGGCATTTAACCTCAA 181825 ||||| || || || || Sbjct 8615063 ATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614588267375040