Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq8 471 6e-128 seq2 405 7e-108 seq10 309 4e-79 seq4 136 6e-27 seq12 104 3e-17 seq6 87.8 3e-12 >seq8 Length=25958679 Score = 471 bits (522), Expect = 6e-128 Identities = 680/959 (71%), Gaps = 25/959 (3%) Strand=Plus/Plus Query 174489 ACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTAATGATTCCTACATTGTTAGCC 174548 ||| | || ||||||||| |||| |||||||||||| | || || ||||| || | || Sbjct 20127833 ACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTGATAATCCCTACCTTATCGACC 20127892 Query 174549 GCAACTGTATGT-TTCATTATCGCTTTCGTGGGTGCTCCCCCAGTGGACATCGACGGAAT 174607 |||||| | ||| || |||||||| ||| | ||| || | ||| ||| Sbjct 20127893 GCAACTTT-TGTATTTATTATCGCCTTCATCACTGCCCCTCTCGTGAGCAT--------- 20127942 Query 174608 CCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCAGTTGT 174667 || |||||| | | || |||||||| || ||||||||||| || | Sbjct 20127943 ----------GTTTCTGGTTTTTTACTTTACGGAAACAATATTATCTCTGGTGCCATTAT 20127992 Query 174668 TCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCGA 174727 ||||| ||| || ||||| | ||||| |||||||| |||||||| || | | || Sbjct 20127993 TCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGA 20128052 Query 174728 CGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTAT 174787 || ||| | ||||| || ||||||| | ||| |||| | |||||| | ||||| | Sbjct 20128053 TGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGT 20128112 Query 174788 --CTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGTTTAGGTATGAGACCTTGG 174845 || | ||||||| |||||||||||||| || ||| | |||||| | |||||| Sbjct 20128113 AGCTTGTC--ATATGGGTCGTGAGTGGGAACTGAGTTTCCGTCTGGGTATGCGTCCTTGG 20128170 Query 174846 ATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCT 174905 || ||| ||||| || || || ||||| || ||| | || || ||| | || ||| Sbjct 20128171 ATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACTGCTGTTTTCTTGAATTACCCT 20128230 Query 174906 TTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTAC 174965 | |||||||| ||||| || | ||||| || || || ||||| || ||||||| Sbjct 20128231 ATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTT 20128290 Query 174966 ATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTC 175025 ||| | || ||||| ||||| ||||||||| | ||||| || || |||||||| || || Sbjct 20128291 ATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTAGGTGTA 20128350 Query 175026 GCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCA 175085 || ||||| ||||| ||||| | ||| || ||||||||||| | || |||||| Sbjct 20128351 GCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGT 20128410 Query 175086 CTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAA 175145 | || | || || ||||||| || || || | ||||||| || || ||||| Sbjct 20128411 TTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAG 20128470 Query 175146 GAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATAC 175205 |||||||| ||||| || ||||| || ||||| || || || || || ||||||||||| Sbjct 20128471 GAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATAT 20128530 Query 175206 GCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGT 175265 ||| || |||||||| || || | ||||||||||| | || ||||| || || || Sbjct 20128531 GCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTTGGTAGCTTGGCCTGTAGTAGGG 20128590 Query 175266 ATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTC 175325 || |||||||| || | ||| || || ||||| ||||| || || || ||||| ||| Sbjct 20128591 ATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTC 20128650 Query 175326 AACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAAC 175385 ||||| ||||| | || | |||||| | || | || || ||||| ||| | | ||| Sbjct 20128651 AACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACTTGGGCTGATATCATCAAC 20128710 Query 175386 AGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444 | ||| |||||| |||||||||||||| || | ||||| ||||||||||| ||||| Sbjct 20128711 CGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGA 20128769 >seq2 Length=33962743 Score = 405 bits (448), Expect = 7e-108 Identities = 700/1015 (69%), Gaps = 14/1015 (1%) Strand=Plus/Minus Query 175853 TGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGGTCTGGATT 175912 ||||||| |||| |||||| | | || || | ||| | ||| | || |||||||| | Sbjct 13366835 TGATATTATGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCT 13366776 Query 175913 ACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCACAACTTTTGT 175972 | | ||| |||| ||||||| | || | || || ||| |||| || ||||||||||| Sbjct 13366775 ATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGT 13366716 Query 175973 CACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAACTTTCTCAC 176032 || |||||| |||||||| | || ||||||| | || ||| || || | || Sbjct 13366715 AACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTAAC 13366656 Query 176033 AGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCC 176092 | || || || | ||||| || | | | || ||| | | ||||| ||||| || Sbjct 13366655 CGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCC 13366596 Query 176093 TGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTCCTTTGTTGC 176152 ||| | || || || || || ||| ||| | || || || ||| | |||||||| Sbjct 13366595 GGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGC 13366536 Query 176153 TCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACTGGCAAGAC- 176211 |||||| || || || || || || || |||||| | ||||| |||||||| || || Sbjct 13366535 TCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATC 13366476 Query 176212 ---TCATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGTATTTG 176268 ||| | || | || || || || ||| ||||| ||| || || ||||| |||| Sbjct 13366475 TGTTCAATTGT----GGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTG 13366420 Query 176269 TCAGTGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTCCTTTG 176328 | || || | | || ||||| || ||||| ||||||||||| || |||| Sbjct 13366419 TTTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTG 13366360 Query 176329 GTGTGGCAGCAATCTTTAGATTCCTATTGTTTCTTCAGGGTTTCCACAACTGGACACTGA 176388 | || ||||| || ||| ||||| | | || | || || || || || ||||| ||| Sbjct 13366359 GCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGA 13366300 Query 176389 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCC 176448 |||| || ||||||||||||||||| || || |||| | || || |||| || || | Sbjct 13366299 ACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 13366240 Query 176449 ATGGCGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTT---CA 176505 |||| | || || ||||| || |||| ||| || || || | || ||||| || Sbjct 13366239 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCA 13366180 Query 176506 CTGCGTTCGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCT 176565 || || | | || || | ||||| || ||||| ||||| || || || ||||| | Sbjct 13366179 CT---TTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTT 13366123 Query 176566 GGTCGCAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGT 176625 |||| |||||||| || ||||| ||| ||||| |||||| | || ||||||||| | | Sbjct 13366122 GGTCCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTAT 13366063 Query 176626 TTGTCCCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATC 176685 |||| || |||| ||| | ||| | ||||||| | | || || ||||| || | Sbjct 13366062 TTGTACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACC 13366003 Query 176686 TTCGTGCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAA 176745 | | ||| ||||| || || ||| || || | ||||| ||||||||||| ||||| | Sbjct 13366002 TACTTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGA 13365943 Query 176746 CTTTCTACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGG 176805 |||||||||| || || || ||| | ||| | || | | || ||||||||| || || Sbjct 13365942 CTTTCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGG 13365883 Query 176806 ATCAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 |||| || ||||| || ||||||| || || |||| ||| | || ||||| Sbjct 13365882 ATCAGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGC 13365828 Score = 147 bits (162), Expect = 3e-30 Identities = 221/314 (70%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 176391 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTGCAATCCAT 176450 || || ||||||||||||||||| || || |||| | || || |||| || || ||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 176451 GGCGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCTTCACTGCG 176510 || | || || ||||| || |||| ||| || || || || |||||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 176511 TTCGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCG 176570 || | | || || | ||||| || ||||| ||||| || || || ||||| ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 176571 CAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTC 176630 |||||||| || ||||| ||| ||||| |||||| | || ||||||||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 176631 CCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGT 176690 || |||| ||| | ||| | ||||||| | | || || ||||| || || ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 176691 GCTTATGATTTTGT 176704 || ||||| || || Sbjct 18365241 GCCTATGACTTCGT 18365254 Score = 104 bits (114), Expect = 3e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 176694 TATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTGAAACTTTCTAC 176753 ||||| || || ||| || || | ||||| ||||||||||| ||||| ||||||||| Sbjct 13367198 TATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTAC 13367257 Query 176754 ACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTGTGGATCAACCA 176813 || || || || ||| | ||||| || | | || ||||||||| || |||||| || Sbjct 13367258 ACCAAAAATATTCTTTTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCT 13367317 Query 176814 CATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||||| || || |||||||| | || ||||| Sbjct 13367318 CATGAAAATCTTATATTCCCTGAGGAGGTTCTACCACGTGGAAACGC 13367364 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/168 (71%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 175266 ATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTC 175325 || |||||||| || | ||| || || ||||| ||||| || ||||| ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 175326 AACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAAC 175385 ||||| ||||| | || | |||||| | || | | || ||||| ||| | | ||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 175386 AGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAAC 175433 | || ||||| |||||||||||||| || | ||||| ||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 309 bits (342), Expect = 4e-79 Identities = 424/594 (71%), Gaps = 10/594 (2%) Strand=Plus/Plus Query 174851 TGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCAGTATTCCTAGTCTATCCTTTCGG 174910 ||| ||||| || || || |||||||| ||| | || || ||| | | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 174911 TCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTCAACTACATGTT 174970 |||||| |||| || | ||||| || || || ||||| || ||||||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 174971 GGTCTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTGGGAGTCGCAGG 175030 || ||||| ||||| ||||||||| | ||||| | || |||||||| || || || || Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 175031 TGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACCTCTTCACTTGT 175090 ||| ||||| ||||| | || || ||||||||||| | || |||||| | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 175091 CCGTGAGACAACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGCCAAGAAGAAGA 175150 | | || || ||||||| || || || | ||||||| || || ||||| ||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 175151 GACCTATAACATCGTGGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTC 175210 ||| ||||| || ||||| || ||||| || || || || || ||||||||||| ||| Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 175211 ATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTG 175270 || |||||||| || || | ||||||||||| || || ||||| || || || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 175271 GTTCACCGCACTTGGTGTTTCCACAATGGCATTCAACCTCAATGGTTTCAACTTCAACCA 175330 ||||| || | ||| || || ||||| ||||| || || || ||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 175331 GTCTGTTATCGACGGACAAGGTAGAGTATTGAACACCTGGGCGGATGTTCTTAACAGAGC 175390 | ||| | || | ||| | || || ||||| ||| | | ||| | || Sbjct 18976131 ATATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTGC 18976180 Query 175391 TGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCACACAACTTCCCACTAGA 175444 | |||||| |||||||||||||| || | ||||| ||||||||||| ||||| Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGA 18976234 Score = 123 bits (136), Expect = 4e-23 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 174900 TATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATCTCTGGAACATTC 174959 || ||| | |||||||| ||||| || | ||||| || || || ||||| || ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 174960 AACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCCTTCCACATGTTG 175019 |||| ||| | || ||||| ||||| ||||||||| | ||||| || || |||||||| Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 175020 GGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGTTCACTTGTTACC 175079 || || || ||||| ||||| ||||| | ||| || ||||||||||| | || ||| Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 175080 TCT 175082 ||| Sbjct 9553476 TCT 9553474 >seq4 Length=30521686 Score = 136 bits (150), Expect = 6e-27 Identities = 213/305 (70%), Gaps = 0/305 (0%) Strand=Plus/Minus Query 176124 CAACTTGGAGGGCTTTGGTCCTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTC 176183 ||| | || || || ||| | |||||||||||||| || || || || || || || ||| Sbjct 19658511 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 19658452 Query 176184 ATGCTTCGTCAGTTTGAACTGGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCA 176243 ||| | |||| |||||||| | | || | || || || || || ||| || Sbjct 19658451 ATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCA 19658392 Query 176244 TTCAGTGGTCCTATCGCTGTATTTGTCAGTGTGTTTCTTCTATACCCACTAGGTCAATCT 176303 ||| ||| || |||||| | ||||| || || || | || ||||| || ||||| Sbjct 19658391 TTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCC 19658332 Query 176304 TCCTGGTTCTTTGCCCCCTCCTTTGGTGTGGCAGCAATCTTTAGATTCCTATTGTTTCTT 176363 ||||||||||| || ||||| || ||||| || ||| ||||| | | || | Sbjct 19658331 GGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTTC 19658272 Query 176364 CAGGGTTTCCACAACTGGACACTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTA 176423 || || || || || ||||| ||||||| || ||||||||||||||||| || || || Sbjct 19658271 CAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGAGTATTA 19658212 Query 176424 GGTGG 176428 || || Sbjct 19658211 GGCGG 19658207 Score = 96.9 bits (106), Expect = 5e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 176124 CAACTTGGAGGGCTTTGGTCCTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTC 176183 ||| | || || || ||| | |||||||||||||| || || || || || || || ||| Sbjct 7261230 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 7261289 Query 176184 ATGCTTCGTCAGTTTGAACTGGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCA 176243 ||| | ||||| |||||||| || | || | || || || || || ||| || Sbjct 7261290 ATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAATGCAATTTCA 7261349 Query 176244 TTCAGTGGTCCTATCGCTGTATTTGTCAGTGTGTTTCTTCTATACCCACTAGGTCAATCT 176303 ||| ||| || |||||||| ||||| || || || | || ||||| || ||||| Sbjct 7261350 TTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATCC 7261409 Query 176304 TCCTGGTTCTTTGCCCCCTCCTTTGGTGTGGCAGCAAT 176341 ||||||||||| || ||||| || ||||| || Sbjct 7261410 GGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 174667 TTCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATCTGGGAAGCAGCCACACTCG 174726 |||||| ||| || ||||| | ||||| |||||||| |||||||| || | | | Sbjct 7243066 TTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTG 7243125 Query 174727 ACGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTCTTCCACTTCCTTATTGGTA 174786 | || ||| | ||||| |||||||||| | ||| |||| | |||||| | ||||| Sbjct 7243126 ATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 7243185 Query 174787 TCTACGCCTATATGGGACGTGAGTGGGAACT 174817 | |||||||| |||||||||||||| Sbjct 7243186 TAGCTTGTTATATGGGTCGTGAGTGGGAACT 7243216 >seq12 Length=23561512 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 175248 GCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAAC 175307 || ||||| || || || || |||||||| || | ||| || || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 175308 CTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACC 175367 || || || ||||| |||||| | ||||| | || | |||||| | || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 175368 TGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCA 175427 ||||| ||| | | || | ||| |||||| |||| |||||| || || | ||| | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 175428 CACAACTTCCCACTAGA 175444 ||||||||||| ||||| Sbjct 9700911 CACAACTTCCCTCTAGA 9700927 >seq6 Length=27870862 Score = 87.8 bits (96), Expect = 3e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 175175 TGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCA 175234 ||| || || || || || ||||||||||| ||| || |||||||| || || | || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 175235 CTTCTTCTTAGCCGCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCAC 175294 ||||||||| || || ||||| || || || || |||||||| || | ||| || || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 175295 AATGGCATTCAACCTCAA 175312 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729894764109840