Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq8 480 1e-130 seq2 477 1e-129 seq10 325 5e-84 seq4 168 8e-37 seq12 136 5e-27 seq6 96.9 4e-15 >seq8 Length=25958679 Score = 480 bits (532), Expect = 1e-130 Identities = 701/989 (71%), Gaps = 25/989 (3%) Strand=Plus/Plus Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908 |||||| | ||| ||||| ||| | ||||| || || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967 || || || || | | | | |||||| | ||| || || |||||||| || |||| Sbjct 20127872 ATAATCCCTACCTTATCGACCGCAACTTT-TGTATTTATTATCGCCTTCATCACTGC--- 20127927 Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027 |||| | ||||| | || |||||| | | || || ||||| Sbjct 20127928 CCCTCT----------------CGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 20127971 Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087 || ||||||||||| || |||| |||| || || || | ||||| || || || Sbjct 20127972 TATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 20128031 Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147 |||||||| ||||| ||||||||||| | || || || ||||||| | || | || Sbjct 20128032 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 20128091 Query 178148 ATTTCACTTCCTCATTG--GTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATAC 178205 | |||||| | ||| ||| || ||| ||||| |||||||||||||| | | Sbjct 20128092 TCTACACTTCTTACTTGGTGTAGCTTGTCAT--ATGGGTCGTGAGTGGGAACTGAGTTTC 20128149 Query 178206 CGTTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCG 178265 ||| | |||||||| || ||||| ||| ||||| || ||||| || || || || | Sbjct 20128150 CGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTACT 20128209 Query 178266 GCAGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGC 178325 || || ||| || || ||| | |||||||| || ||||| | ||||| | || Sbjct 20128210 GCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGA 20128269 Query 178326 ATCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCAC 178385 || |||||||| ||||||| ||| |||| ||||| ||||| || ||||| || ||||| Sbjct 20128270 ATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCAT 20128329 Query 178386 CCCTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCAC 178445 || || |||||||| ||||| || ||||||||||| ||||| || |||||||| ||||| Sbjct 20128330 CCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCAT 20128389 Query 178446 GGTTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTAT 178505 ||||| ||||| || ||| | | | ||||| ||||||| ||||| || | Sbjct 20128390 GGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATGAG 20128449 Query 178506 GGTTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTC 178565 ||||| | || || ||||| |||||||| || || || || || || ||||| || || Sbjct 20128450 GGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATTTT 20128509 Query 178566 GGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTC 178625 || || || ||||||||||||||| || |||||||| ||||| | ||||||||| | Sbjct 20128510 GGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCTTG 20128569 Query 178626 GCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTT 178685 | ||| ||||||||||| || || |||||||| || | || | || || ||||| || Sbjct 20128570 GTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTC 20128629 Query 178686 AACCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAAC 178745 || || || |||||||| |||||||| || | | || | ||||| || || | || Sbjct 20128630 AATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAAT 20128689 Query 178746 ACATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAAC 178805 || ||||| || | |||||||||| ||| || |||||||| |||||||| || || Sbjct 20128690 ACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTAAT 20128749 Query 178806 GCGCACAACTTCCCGCTTGATCTTGCAGC 178834 || ||||||||||| || || || || || Sbjct 20128750 GCTCACAACTTCCCTCTAGACCTAGCTGC 20128778 >seq2 Length=33962743 Score = 477 bits (528), Expect = 1e-129 Identities = 710/1002 (71%), Gaps = 4/1002 (0%) Strand=Plus/Minus Query 179233 TGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGGTCTGGACTCCTACTTC 179292 ||||||||||| | | |||| || ||||| ||||| || |||||||| || | ||| Sbjct 13366827 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 13366768 Query 179293 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACAGCTTTTGTTACGAGTT 179352 |||| ||||||| | || | || |||||| |||| |||||| ||||||| || || Sbjct 13366767 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 13366708 Query 179353 GGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAACTTTCTTA-CGGCAGCT 179411 |||| ||||| || | || ||||||||| | || ||| || ||||||| | | ||| Sbjct 13366707 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGTAGCA 13366649 Query 179412 GTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 179471 || || | ||||| || | | | || ||| | | ||||| ||||| || || | Sbjct 13366648 GTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 13366589 Query 179472 CAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 179531 || ||| |||| || ||||| ||| | || || || |||| ||| || |||||||| Sbjct 13366588 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCAT 13366529 Query 179532 GGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGG 179590 || || || || || || ||||||||| | | ||||||||||||||||| ||| | Sbjct 13366528 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAA 13366469 Query 179591 TATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTT 179650 | | | ||||| ||||| ||| | || ||||| || |||||||| || || || || Sbjct 13366468 T-TGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATT 13366410 Query 179651 CCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGC 179710 || || ||||| |||| || ||| |||||| || |||||| ||||| || || || Sbjct 13366409 CCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGC 13366350 Query 179711 GATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCA 179770 ||| || | ||| | || ||| | || || || || || |||||| | ||||| || || Sbjct 13366349 GATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCA 13366290 Query 179771 TATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTAC 179830 ||||||||||||||| || || |||| | || ||||| | ||||| ||||| | || Sbjct 13366289 TATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAAC 13366230 Query 179831 TGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTC 179890 || || || || | | ||| || || || ||||||||||| | ||| | | Sbjct 13366229 CGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCC 13366170 Query 179891 GACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTT 179950 || || | ||||| |||||||| |||||||| || || ||||| ||||| || ||||| Sbjct 13366169 AACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTT 13366110 Query 179951 CGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTAT 180010 ||| |||| ||||| || || || ||| | ||||| || ||| | ||||| || || | Sbjct 13366109 TGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCAC 13366050 Query 180011 GGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGA 180070 ||| |||||| |||||||| | | || || ||||| ||||| | ||| || || Sbjct 13366049 CGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGA 13365990 Query 180071 TTTCGTAAGTCAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAA 180130 ||||| ||||| ||| | ||||| |||||||| || |||||||| ||||||||||| Sbjct 13365989 CTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAA 13365930 Query 180131 GAACATTCTTCTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGA 180190 || |||||| | || | || | ||||| ||| ||||| | ||||| || ||||| Sbjct 13365929 AAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGA 13365870 Query 180191 GTCATTCGTATTCCCAGAAGAAGTTCTGCCAAGAGGTAATGC 180232 | ||||||| || || |||| ||| | || || || Sbjct 13365869 AAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGC 13365828 Score = 165 bits (182), Expect = 1e-35 Identities = 225/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 179763 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGCTATCCAT 179822 || || ||||||||||||||||| || || |||| | || ||||| | ||||| ||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 179823 GGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCG 179882 || | || || || || || | | ||| || || || ||||||||||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 179883 TTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCG 179942 ||| | | || || | ||||| |||||||| |||||||| || || ||||| ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 179943 CAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTG 180002 || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 180003 CCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGT 180062 || || | ||| |||||| |||||||| | | || || ||||| ||||| ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 180063 GCTTACGATTTCGT 180076 || || || ||||| Sbjct 18365241 GCCTATGACTTCGT 18365254 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 180081 CAGGAGATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAAGAACATTCTT 180140 ||||| ||| | ||||| |||||||| || |||||||| ||||||||||| || |||||| Sbjct 13367213 CAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 13367272 Query 180141 CTCAATGAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGAGTCATTCGTA 180200 | || || || | ||||| ||| ||||| | ||||| || ||||| | || Sbjct 13367273 TTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATA 13367332 Query 180201 TTCCCAGAAGAAGTTCTGCCAAGAGGTAATGC 180232 ||||| || || ||||| ||| | || || || Sbjct 13367333 TTCCCTGAGGAGGTTCTACCACGTGGAAACGC 13367364 >seq10 Length=20731201 Score = 325 bits (360), Expect = 5e-84 Identities = 433/603 (72%), Gaps = 10/603 (2%) Strand=Plus/Plus Query 178232 TGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGCAGTATTCCTGGTCTATCCTTTCGG 178291 ||| ||||| || ||||| || ||||| || | || || ||| || | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 178292 TCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTCAACTACATGCT 178351 |||||| || | ||| | ||||| | || || |||||||| ||||||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 178352 TGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTGGGTGTCGCAGG 178411 ||| ||||| ||||| || ||||| || ||||| | || |||||||| ||||| || || Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 178412 TGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGT 178471 ||||||||| ||||| || || ||||| ||||| ||||| ||||| || ||| | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 178472 TCGTGAAACGACTGAAACAGAATCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGA 178531 | ||||| ||||||| ||||| || | ||||| | || || ||||| ||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 178532 GACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTC 178591 ||| || || || || || || ||||| || || || || || ||||||||||||||| Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 178592 ATTCAACAACTCACGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTG 178651 || |||||||| || || | ||||||||| | || || ||||||||||| || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 178652 GTTCACCGCACTGGGCGTAAGCACCATGGCATTTAACCTCAATGGATTCAACTTCAACCA 178711 ||||| || | || | || || ||||| || || || || |||||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 178712 GTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGACGTGCTCAACCGTGC 178771 | | | || | ||| | || || ||||| || | |||||||||| Sbjct 18976131 ATATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTGC 18976180 Query 178772 CGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCGCACAACTTCCCGCTTGATCTTGC 178831 ||| || |||||||| |||||||| || || || ||||||||||| || || || || Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 18976240 Query 178832 AGC 178834 || Sbjct 18976241 TGC 18976243 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 178281 TATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCATCTCTGGTACATTC 178340 || ||| | |||||||| || ||||| | ||||| | || || |||||||| ||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 178341 AACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCCCTTCCACATGTTG 178400 |||| ||| |||| ||||| ||||| || ||||| || ||||| || || |||||||| Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 178401 GGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACA 178460 ||||| || ||||||||||| ||||| || |||||||| ||||| ||||| ||||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACC 9553477 Query 178461 TCTTCACTCGTTCGTGAAACGACTGAAACAGAATC 178495 ||| | | | ||||| ||||||| ||||| Sbjct 9553476 TCTAGTTTGATCAGGGAAACCACTGAAAACGAATC 9553442 >seq4 Length=30521686 Score = 168 bits (186), Expect = 8e-37 Identities = 228/315 (72%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 179487 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTC 179546 || ||||| ||| | || || || |||| ||| || |||||||| || || || || || Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 179547 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGC-CTGATTGGTATCAGACCTTACAA 179605 || ||||||||| | | |||||||||||| |||| ||| | | | | ||||| || Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAATTGCGG-CCTTATAA 19658402 Query 179606 TGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTTCCTCATCTATCCTTT 179665 ||| ||| | || ||||| || || ||| | || || || ||||| || ||||| | Sbjct 19658401 TGCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACT 19658342 Query 179666 GGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCTT 179725 ||| || ||| |||||| || |||||| ||||| || || ||||| || | ||| | Sbjct 19658341 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCAT 19658282 Query 179726 GCTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCATATGATGGGAGTTGC 179785 || ||| | || || || || || |||||| | ||||| || ||||||||||||||||| Sbjct 19658281 CCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGC 19658222 Query 179786 TGGTATACTAGGAGG 179800 || || |||| || Sbjct 19658221 CGGAGTATTAGGCGG 19658207 Score = 125 bits (138), Expect = 9e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 179487 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCTCTC 179546 || ||||| ||| | || || || |||| ||| || |||||||| || || || || || Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 179547 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTC-GCCTGATTGGTATCAGACCTTACAA 179605 || ||||||||| | | |||||||||||||||| | ||| || | | ||||| || Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTG-TTCAATTGCGGCCTTATAA 7261339 Query 179606 TGCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTTCCTCATCTATCCTTT 179665 ||| ||| | || ||||| || || ||||| || || || ||||| || ||||| | Sbjct 7261340 TGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACT 7261399 Query 179666 GGGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGAT 179713 ||| || ||| |||||| || |||||| ||||| || || ||||| Sbjct 7261400 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 136 bits (150), Expect = 5e-27 Identities = 204/287 (71%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908 |||||| | ||| ||||| ||| | ||||| || || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967 ||||| || || | ||| | |||||| ||||| || || |||||||| ||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027 || | || || || || || ||||| | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087 || ||||||||| | || |||| |||| | || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 178134 |||||||| ||||| ||||||||||| | || || || ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 Score = 102 bits (112), Expect = 1e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 178629 GCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAAC 178688 || ||||||||||| || || |||||||| || | || | || || ||||| || || Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 178689 CTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACA 178748 || || |||||||| |||||| | || | | || | ||||| || || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 178749 TGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGCG 178808 ||||| || | |||| ||||| ||| || |||| ||| || ||||| || || | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 178809 CACAACTTCCCGCTTGATCTTGCAGC 178834 ||||||||||| || || || || || Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGC 9700936 >seq6 Length=27870862 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 178556 TGGCTACTTCGGTCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCA 178615 ||| || || || || || ||||||||||||||| || |||||||| ||||| | || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 178616 CTTCTTCCTCGCAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCAC 178675 ||||||| | || || ||||||||||| || || |||||||| || | || | || || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 178676 CATGGCATTTAACCTCAA 178693 ||||| || || || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605980678191840