Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq2 522 3e-143 seq8 482 3e-131 seq10 349 4e-91 seq4 206 3e-48 seq12 113 6e-20 seq6 100 3e-16 >seq2 Length=33962743 Score = 522 bits (578), Expect = 3e-143 Identities = 718/1001 (72%), Gaps = 2/1001 (0%) Strand=Plus/Minus Query 180031 TGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGGTCTGGACTACTACTTC 180090 ||||||||||| | | | ||||| ||||| ||||| || |||||||| ||| | ||| Sbjct 13366827 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 13366768 Query 180091 TTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTCACGAGTT 180150 |||| ||||||| | || | || |||||| |||| || ||| ||||||| || || Sbjct 13366767 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 13366708 Query 180151 GGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTCTTA-CGGCAGCT 180209 |||| ||||| || | || ||||||| | |||||| || ||||||| | | ||| Sbjct 13366707 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAA-TTTCTTAACCGTAGCA 13366649 Query 180210 GTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCT 180269 || || | ||||| | | | | || ||| | | ||||| ||||| || || | Sbjct 13366648 GTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCA 13366589 Query 180270 CAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCAC 180329 || ||| |||| || ||||| ||| | || || || |||| ||| || |||||||| Sbjct 13366588 CAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCAT 13366529 Query 180330 GGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGT 180389 || || || || ||||| || || ||| |||| || |||||||| || || | || Sbjct 13366528 GGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAA 13366469 Query 180390 ATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTT 180449 | | ||||| ||||| ||| |||||||||| || || ||||| ||||| |||||| Sbjct 13366468 TTGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATTC 13366409 Query 180450 CTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCA 180509 | || || |||||||| || ||| ||||||||||||| || |||||| |||||||| Sbjct 13366408 CCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 13366349 Query 180510 ATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCAT 180569 || ||| ||||| | ||||| | || || || || || ||||| | ||||| || ||| Sbjct 13366348 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 13366289 Query 180570 ATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCATGGCGTAACT 180629 |||||||||||||| || || |||| | || |||||| || || ||||| | ||| Sbjct 13366288 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 13366229 Query 180630 GTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCATTTGATTCA 180689 ||||| ||||| || | ||| || || || |||| |||||| | ||| | || Sbjct 13366228 GTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCCA 13366169 Query 180690 ACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTC 180749 || |||| || || ||||| || |||||||| || || ||||| ||||| || ||||| Sbjct 13366168 ACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 13366109 Query 180750 GGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATG 180809 ||| |||| ||||| || || || ||| | ||||| || ||| | ||||| || || | Sbjct 13366108 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 13366049 Query 180810 GGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGAT 180869 ||| |||||| |||||||| | | || || ||||| ||||| | ||| || || Sbjct 13366048 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGAC 13365989 Query 180870 TTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAG 180929 ||||| || || ||| | ||||| ||||||||||| || ||||| ||||||||||| Sbjct 13365988 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 13365929 Query 180930 AACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAA 180989 || || || || || | || | ||||| ||| ||||| || ||||| || || ||| Sbjct 13365928 AATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 13365869 Query 180990 AACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030 || | || |||||||| || |||| |||| | || ||||| Sbjct 13365868 AATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGC 13365828 Score = 179 bits (198), Expect = 5e-40 Identities = 228/314 (73%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 180561 CCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGCAATCCAT 180620 || || ||||||||||||||||| || || |||| | || |||||| || || ||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 180621 GGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTTTAAGGCA 180680 || | ||| ||||| ||||| || | ||| || || || ||||| ||||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 180681 TTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCG 180740 ||| | |||| |||| || |||||||| || |||||||| || || ||||| ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 180741 CAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTG 180800 || ||||| ||| |||| ||||| || || || ||| | ||||| || ||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 180801 CCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGT 180860 || || | ||| |||||| |||||||| | | || || ||||| ||||| ||| Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 180861 GCTTACGATTTCGT 180874 || || || ||||| Sbjct 18365241 GCCTATGACTTCGT 18365254 Score = 113 bits (124), Expect = 6e-20 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 180879 CAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTA 180938 || || ||| | ||||| ||||||||||| || ||||| ||||||||||| || || || Sbjct 13367213 CAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTT 13367272 Query 180939 TTGAATGAAGGACTACGTGCATGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATC 180998 || || || || | ||||| ||| ||||| || ||||| || || ||||| | || Sbjct 13367273 TTAAACGAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAAAATCTTATA 13367332 Query 180999 TTCCCTGAAGAAGTTCTACCAAGAGGTAACGC 181030 |||||||| || ||||||||| | || ||||| Sbjct 13367333 TTCCCTGAGGAGGTTCTACCACGTGGAAACGC 13367364 Score = 84.2 bits (92), Expect = 3e-11 Identities = 120/168 (71%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 179659 ATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTC 179718 || |||||||||||| | || | || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 179719 AACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAAC 179778 ||||| || | |||| | ||||| || || || | || ||||| || | | ||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 179779 CGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 179826 |||||| | | | ||||||||| ||||| || ||||| || ||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq8 Length=25958679 Score = 482 bits (534), Expect = 3e-131 Identities = 604/822 (73%), Gaps = 6/822 (1%) Strand=Plus/Plus Query 179029 TATGGAAACAACATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACAC 179088 || |||||||| || ||||||||||| || | || | ||| || || || | ||| Sbjct 20127961 TACGGAAACAATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCAC 20128020 Query 179089 TTCTACCCCATCTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTC 179148 || ||||| || |||||||| ||||| | ||||||||| | || || || ||||||| Sbjct 20128021 TTTTACCCAATTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTAT 20128080 Query 179149 CAACTGGTAGTCTTCCACTTCCTTATCGGCAT--CTATGCCTATATGGGACGTGAGTGGG 179206 | || | || | |||||| | | || | || || | ||||||| |||||||||| Sbjct 20128081 GAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCT-TGTC-ATATGGGTCGTGAGTGGG 20128138 Query 179207 AACTTTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCG 179266 |||| || |||||| ||||||||||| ||||| ||||||||| || || || || | Sbjct 20128139 AACTGAGTTTCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTG 20128198 Query 179267 CTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTA 179326 | ||||| | ||| || ||| | || ||| | |||||||| ||||||||||| || Sbjct 20128199 CGGCTGCTACTGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTA 20128258 Query 179327 TGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACA 179386 ||||| | || || ||||||||||| |||| ||| |||||||||| ||||| || |||| Sbjct 20128259 TGCCTTTAGGAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACA 20128318 Query 179387 TCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCT 179446 |||||||||| || || || ||| | ||||| ||||| |||||||| || || || ||| Sbjct 20128319 TCCTTATGCATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCA 20128378 Query 179447 CTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGTTC-GTGAAACAACTGAGACAGAG 179505 ||||||||| || | || || | || | ||| || | ||||| ||||| | || Sbjct 20128379 GTGCTATGCATGGTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAA 20128437 Query 179506 TCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCA 179565 || || | ||||| | || || ||||| |||||||| ||||| || || || || Sbjct 20128438 TCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCT 20128497 Query 179566 CATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTG 179625 ||||| || || || || || |||||||||||||| ||||||||||| || || || Sbjct 20128498 CATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTA 20128557 Query 179626 CACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCA 179685 ||||||||| | | || ||||| || || || || |||||||||||| | || | Sbjct 20128558 CACTTCTTCTTGGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGT 20128617 Query 179686 ACCATGGCGTTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGA 179745 || ||||| ||||| || ||||| ||||| |||||||| || | |||| | ||||| Sbjct 20128618 ACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGT 20128677 Query 179746 CGTGTCCTTAACACATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATG 179805 || || |||| || ||||| || | | |||||||| | | ||||||||||| ||| Sbjct 20128678 CGCGTTATTAATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATG 20128737 Query 179806 CATGAGCGTAACGCACACAACTTCCCACTCGACCTTGCTGCT 179847 || || ||||| || ||||||||||| || ||||| |||||| Sbjct 20128738 CACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq10 Length=20731201 Score = 349 bits (386), Expect = 4e-91 Identities = 441/605 (73%), Gaps = 12/605 (2%) Strand=Plus/Plus Query 179244 TGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGG 179303 ||||||||| || || || || || ||||| | ||| || ||| | | || ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 179304 TCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCT 179363 |||||| ||||| ||||| ||||||| | || || ||||||||||| |||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 179364 TGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGG 179423 ||||||||| ||||| || |||||||||||||| | || || ||| | ||||| ||||| Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 179424 GGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGTTACTTCCTCGCTTGT 179483 |||||||| || || || || ||||||||| || | || || | || | ||| Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCT-CTAGTTTGA 18975889 Query 179484 TC-GTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAG 179542 || | ||||| ||||| | || || || | ||||| | || || ||||| |||| Sbjct 18975890 TCGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAG 18975949 Query 179543 AGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCAT 179602 |||| ||||| || || || || ||||| || || || || || |||||||||||||| Sbjct 18975950 AGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTA 18976009 Query 179603 CCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCT 179662 ||||||||||| || ||||| ||||||||| | ||||| ||||| || || || || | Sbjct 18976010 GTTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTT 18976069 Query 179663 GGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGGTTTCAACTTCAACC 179722 |||||| |||| | || | || ||||| ||||| || ||||| ||||| ||||||| Sbjct 18976070 GGTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACC 18976129 Query 179723 AGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACATGGGCGGACGTATTGAACCGTG 179782 | | | |||| | ||| |||| || ||||| || | | ||||||| Sbjct 18976130 AATATGTAGTTGATAGCCAA----------TTAATACTTGGGCTGATATCATCAACCGTG 18976179 Query 179783 CAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGACCTTG 179842 | | | ||||||||||| ||||| || ||||| || ||||||||||| || ||||| | Sbjct 18976180 CTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAG 18976239 Query 179843 CTGCT 179847 ||||| Sbjct 18976240 CTGCT 18976244 Score = 152 bits (168), Expect = 6e-32 Identities = 134/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 179293 TATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTACTTTT 179352 || ||| | |||||||| ||||||||||| ||||||| | || || ||||||||||| Sbjct 9553656 TACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGGAATATCTGGTACTTTC 9553597 Query 179353 AACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATATGCTC 179412 |||| ||| |||||||||| ||||| || |||||||||||||| || || || ||| | Sbjct 9553596 AACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCATCCATTTCACATGTTA 9553537 Query 179413 GGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459 ||||| ||||| |||||||| || || || ||| ||||||||| || Sbjct 9553536 GGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 9553490 >seq4 Length=30521686 Score = 206 bits (228), Expect = 3e-48 Identities = 234/314 (75%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 180285 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTA 180344 || ||||| ||| | || || || |||| ||| || |||||||| || || || || ||| Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 180345 ATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAAT 180404 || || || ||| || | || |||||||| | || | || | || ||||| ||| Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAATTGCGGCCTTATAAT 19658401 Query 180405 GCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTG 180464 || ||| |||||||||| || |||||| | ||||| |||||| || || || |||||| Sbjct 19658400 GCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTG 19658341 Query 180465 GGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAATCTTTAGATTCCTA 180524 || || ||| ||||||||||||| || |||||| |||||||| || ||| ||||| | Sbjct 19658340 GGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATC 19658281 Query 180525 CTCTTTCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCT 180584 ||||| | || || || || || ||||| | ||||| || ||||||||||||||||| Sbjct 19658280 CTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCC 19658221 Query 180585 GGTATACTAGGTGG 180598 || || |||| || Sbjct 19658220 GGAGTATTAGGCGG 19658207 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 180285 CGGTGGTGCCAACTTGGGGGACTCTGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTA 180344 || ||||| ||| | || || || |||| ||| || |||||||| || || || || ||| Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 180345 ATTGGATTTATGCTACGCCAGTTTGAACTGGCACGTCTTATTGGTATCCGTCCTTACAAT 180404 || || || ||| |||| || |||||||| || || | || | || ||||| ||| Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAATTGCGGCCTTATAAT 7261340 Query 180405 GCTATTGCATTCTCTGGTCCTATCGCTGTATTTGTCAGCGTATTTCTCATCTACCCACTG 180464 || ||| |||||||||| || |||||||| ||||| |||||| || || || |||||| Sbjct 7261341 GCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTG 7261400 Query 180465 GGTCAGTCCAGTTGGTTCTTTGCTCCCTCTTTTGGGGTAGCAGCAAT 180511 || || ||| ||||||||||||| || |||||| |||||||| || Sbjct 7261401 GGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 113 bits (124), Expect = 6e-20 Identities = 149/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 179641 GCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAAC 179700 || ||||| || || || || |||||||||||| | || | || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 179701 CTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACACA 179760 || ||||| ||||| |||||| | || | |||| | ||||| || || |||| || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 179761 TGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCA 179820 ||||| || | | || ||||| | | ||||||| ||| || || || ||||| | Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 179821 CACAACTTCCCACTCGACCTTGCTGCT 179847 ||||||||||| || ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 >seq6 Length=27870862 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 179568 TGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCA 179627 ||| || || || || || |||||||||||||| ||||||||||| || ||||| || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 179628 CTTCTTCCTTGCTGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAAC 179687 ||||||| | ||||| ||||| || || || || |||||||||||| | || | || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 179688 CATGGCGTTCAACCTCAA 179705 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610300472019840