Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05]
3,818 sequences; 339,177,042 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 206 3e-48
seq5 201 1e-46
seq6 190 2e-43
seq2 185 1e-41
seq7 170 2e-37
seq1 140 4e-28
seq8 138 1e-27
seq9 95.1 1e-14
seq3 82.4 9e-11
>seq4
Length=30521686
Score = 206 bits (228), Expect = 3e-48
Identities = 182/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| || || ||||| || ||||||||||| ||||| || ||||| |||||
Sbjct 27324190 ATGCAAATATTCGTGAAGACCCTCACCGGCAAGACCATTACCCTGGAGGTCGAGTCCTCC 27324249
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||||| || || ||||||||||||||||| || |||||||||
Sbjct 27324250 GACACGATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 27324309
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| ||||| |||||||||| || ||||| |||||||| ||
Sbjct 27324310 CAGCGTCTCATCTTTGCTGGGAAGCAGCTCGAGGATGGCCGCACCCTTGCAGACTACAAC 27324369
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||||||||||| || || || ||| |||| || || || ||
Sbjct 27324370 ATCCAAAAGGAATCCACCCTGCACCTTGTCCTGCGCCTCCGGGGCGG 27324416
Score = 194 bits (214), Expect = 2e-44
Identities = 179/227 (79%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || ||||||||||| || || || ||||||||||| |
Sbjct 27324646 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTTGAGTCGTCT 27324705
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||||| || || |||||||||||||| ||||| |||||||||
Sbjct 27324706 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 27324765
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| || ||||||| ||| ||||| ||||| || ||
Sbjct 27324766 CAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTTGCAGATTACAAC 27324825
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || || ||| |||| ||||| || ||
Sbjct 27324826 ATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTTCGTGGAGG 27324872
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| || ||||| |||||||| || |
Sbjct 27324874 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTGGAGGTTGAATCCTCT 27324933
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| |||||||| || ||||||||||||
Sbjct 27324934 GACACCATCGACAACGTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCTCCAGACCAG 27324993
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||||| || ||||| || ||||||||
Sbjct 27324994 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTATAAC 27325053
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || || ||| |||| || || |||||
Sbjct 27325054 ATCCAGAAGGAGTCCACCCTGCACCTTGTCCTGCGCCTCCGTGGTGG 27325100
Score = 176 bits (194), Expect = 5e-39
Identities = 175/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| ||||| |||||||| || || | ||||||||||| |
Sbjct 27324418 ATGCAGATCTTTGTGAAGACCCTTACTGGCAAGACGATCACCTTGGAGGTTGAGTCCTCT 27324477
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||||| || || |||||||||||||| ||||| |||||||||
Sbjct 27324478 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 27324537
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| || ||||| | || ||||| || ||||||||
Sbjct 27324538 CAGCGGCTCATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGCACCCTTGCTGACTATAAC 27324597
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | || | ||| | || ||||| || ||
Sbjct 27324598 ATCCAGAAGGAGTCCACCTTGCACTTGGTCCTCCGCCTTCGTGGAGG 27324644
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || |||||||| || || | |||||||||||
Sbjct 27323962 ATGCAGATATTCGTTAAGACCCTCACTGGCAAGACCATCACCTTGGAGGTTGAGTCCTCC 27324021
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| |||||||||| ||||||||||||||||| || ||||| ||||||
Sbjct 27324022 GATACGATTGACAATGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 27324081
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| || || || || ||||| ||||| || ||||||| ||||| || || || |||||
Sbjct 27324082 CAACGCCTTATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGTACTCTCGCGGATTATAAC 27324141
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | || || ||| | || ||||| || ||
Sbjct 27324142 ATCCAGAAGGAGTCCACCTTGCACCTTGTCCTCCGCCTTCGTGGAGG 27324188
>seq5
Length=26652778
Score = 201 bits (222), Expect = 1e-46
Identities = 170/209 (81%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||||||||||||||| | || ||||||||||| || |||||||||||||| |
Sbjct 21799543 ATGCAAATCTTTGTCAAGACCTTGACTGGCAAGACTATCACCCTTGAGGTTGAGTCTTCT 21799602
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| || | ||||| || || |||||||||||||| ||||| || ||||||
Sbjct 21799603 GATACTATTGACAACGTTAAGGCAAAGATCCAGGACAAGGAGGGGATTCCCCCGGACCAG 21799662
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||| ||||| |||||||||| | | ||||| || ||||| ||
Sbjct 21799663 CAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTAGGACCCTTGCTGACTACAAC 21799722
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| ||||| || ||
Sbjct 21799723 ATCCAGAAGGAGTCCACCCTTCACCTTGT 21799751
Score = 192 bits (212), Expect = 7e-44
Identities = 180/229 (79%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| ||||| || ||||| ||||| |||||||| ||||| |||||||||||||||
Sbjct 21799770 AATGCAGATCTTCGTGAAGACCCTTACTGGCAAGACCATTACGCTTGAGGTTGAGTCATC 21799829
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | || | || ||||||| || || |||||||||||||| ||||| ||||| ||
Sbjct 21799830 AGACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCAGATCA 21799889
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||||||| |||||||| || ||||| || ||||||| | ||||| || ||||| ||
Sbjct 21799890 GCAGCGTCTTATTTTTGCCGGCAAGCAGCTGGAGGATGGCAGGACCCTCGCTGACTACAA 21799949
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|||| ||||| ||||| ||||| || || |||| || | ||||||
Sbjct 21799950 CATCCAGAAGGAGTCCACCCTTCACCTTGTTCTGCGCCTAAGGGGTGGA 21799998
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || ||||||||||||||
Sbjct 21799315 ATGCAGATCTTTGTGAAGACTCTCACTGGCAAGACCATAACCCTTGAGGTTGAGTCCTCG 21799374
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||||| ||| | ||||| || || ||||||||||||||||| || || ||||||
Sbjct 21799375 GATACCATTGACAATGTAAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCGGACCAG 21799434
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || || |||| || || || || ||||| ||
Sbjct 21799435 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAAGATGGGCGCACGCTTGCTGACTACAAC 21799494
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||||||||| || || || ||| | || || || || ||
Sbjct 21799495 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTCCGCCTCCGGGGAGG 21799541
Score = 181 bits (200), Expect = 1e-40
Identities = 177/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
||||||||||||||||||||| | |||||||| || ||||| || |||||||||||
Sbjct 7980803 AATGCAAATCTTTGTCAAGACATTGACCGGCAAAACCATTACCCTGGAGGTTGAGTCGTC 7980744
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | |||| || | || || || ||||||||||||||| | ||||| || || ||
Sbjct 7980743 AGACACAATTGACAACGTAAAAGCAAAGATTCAGGACAAGGAGAGCATTCCCCCGGATCA 7980684
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || |||||||| ||||| |||||||||| || ||| ||||||| || ||
Sbjct 7980683 GCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCTTAGCAGATTACAA 7980624
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| | || || || | ||||| ||||||||
Sbjct 7980623 CATCCAGAAGGAGTCCACCTTGCACCTGGTGCTCCGTCTCCGCGGTGG 7980576
Score = 174 bits (192), Expect = 2e-38
Identities = 179/232 (77%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| ||||| |||||||| |||||||| ||||||||| || |
Sbjct 21800227 ATGCAGATCTTCGTCAAGACTCTTACTGGCAAGACCATTACTCTGGAGGTTGAG--AGCT 21800284
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|||| ||| | ||| |||||||||| || ||||||||||| || ||||| |||||||
Sbjct 21800285 CCGATACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAAGGTATTCCCCCAGACC 21800344
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
||||||| || || || || || ||||| || || |||| |||||||| || ||||| |
Sbjct 21800345 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGCCGTACCCTCGCCGACTACA 21800404
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| | || ||||| || || || || || || | || || | ||||| ||
Sbjct 21800405 ACATTCAGAAGGAGTCTACCCTCCACCTGGTGCTCCGCCTCAGGGGTGGTCA 21800456
Score = 170 bits (188), Expect = 2e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||||||||| || ||||| ||||| ||||| |||||||| ||||| |
Sbjct 7981030 ATGCAGATTTTTGTCAAGACCCTGACCGGAAAGACCATTACGCTTGAGGTCGAGTCTTCT 7980971
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | ||| ||||||| || ||||||||||||||||| || || | ||||||
Sbjct 7980970 GATACAATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCGGGACCAG 7980911
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || || || ||||| |||||||| | || |||| || ||||| |||
Sbjct 7980910 CAGCGCTTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCGCCCTGGCTGACTACAAT 7980851
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| || || ||||| |||||
Sbjct 7980850 ATCCACAAGGAGTCTACCCTTCACCTAGT 7980822
Score = 168 bits (186), Expect = 8e-37
Identities = 164/210 (78%), Gaps = 1/210 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||||||||| |
Sbjct 7981259 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATAACCCTAGAGGTTGAGTCCTCT 7981200
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| ||| | ||||| || ||||||||||||||||||||||| || ||||||
Sbjct 7981199 GACACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGAATTCCACCTGACCAG 7981140
Query 27526 CAGCGTCTAATTTTTGCTGG-TAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
||||| || || ||||| || |||||||| ||||| | || ||||| ||||| || ||
Sbjct 7981139 CAGCGCCTCATCTTTGCGGGCAAAGCAACTTGAGGACGGACGCACCCTCGCAGATTACAA 7981080
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614
| || || || ||||| ||||| || ||
Sbjct 7981079 CATTCAGAAAGAGTCCACCCTTCACCTTGT 7981050
Score = 150 bits (166), Expect = 2e-31
Identities = 158/206 (77%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || || |||||||| || || |||||||||||||| || ||||||||| ||
Sbjct 21799998 AATGCAGATTTTCGTCAAGACTCTCACTGGCAAGACTATTACCCTGGAGGTTGAG--AGC 21800055
Query 27465 T--GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522
| || | ||||| || ||||||| || || ||||| |||||||| || || || |||
Sbjct 21800056 TCAGACACCATTGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCGGAC 21800115
Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582
|||||| | || || || ||||||||||| || ||||||| || ||||| || |||||
Sbjct 21800116 CAGCAGAGACTCATCTTCGCTGGTAAGCAGCTGGAGGATGGACGCACCCTTGCCGACTAC 21800175
Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608
|| | || ||||| || || || ||
Sbjct 21800176 AACATTCAGAAGGAGTCTACCCTACA 21800201
Score = 149 bits (164), Expect = 7e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || || ||||| || || || ||||| |||||
Sbjct 3217164 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGTCCTCG 3217223
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||||||||| || || || || ||||||
Sbjct 3217224 GACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAG 3217283
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||||| || ||||| || ||||| ||
Sbjct 3217284 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCGCCGACTACAAC 3217343
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || || || | || || ||||| ||
Sbjct 3217344 ATCCAGAAGGAGTCCACCCTCCACCTCGTGCTCCGCCTCCGCGGCGG 3217390
>seq6
Length=27870862
Score = 190 bits (210), Expect = 2e-43
Identities = 173/218 (79%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || || |||||||| || || || ||||||||||| |
Sbjct 24977347 ATGCAGATCTTTGTGAAGACACTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCT 24977288
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| ||||||| || ||||||||||||||||| ||||| || ||||||
Sbjct 24977287 GATACAATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCACCTGACCAG 24977228
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| ||||| || |||||||| |||||||| ||||||| || ||||| || || || ||
Sbjct 24977227 CAACGTCTCATCTTTGCTGGCAAGCAACTAGAGGATGGCCGCACCCTCGCGGATTACAAC 24977168
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| ||||| ||||| || || || ||| | || ||
Sbjct 24977167 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTTCGCCT 24977130
Score = 181 bits (200), Expect = 1e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| ||||| ||||||||||||||
Sbjct 25466389 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCGTCC 25466448
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||||| || || |||||||||||||| || || || ||||||
Sbjct 25466449 GACACTATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 25466508
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || |||||||||||||| || ||||||| || ||||| || || || ||
Sbjct 25466509 CAGCGTCTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTTGCGGATTACAAC 25466568
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||| ||||| ||||| || || || || | || || || ||||| ||
Sbjct 25466569 ATCCAGAAGGAGTCCACACTCCACCTGGTGCTCCGCCTCCGTGGTGGCCA 25466618
Score = 174 bits (192), Expect = 2e-38
Identities = 164/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || ||||||||||| || || |||||||| ||||| |
Sbjct 25465021 ATGCAGATCTTTGTGAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCT 25465080
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || |||||||||||||| || || || ||||||
Sbjct 25465081 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 25465140
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || ||||||| || ||||| || ||||| ||
Sbjct 25465141 CAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTGGCCGACTACAAC 25465200
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| || || || || || ||
Sbjct 25465201 ATCCAGAAGGAGTCTACCCTCCACCTTGT 25465229
Score = 170 bits (188), Expect = 2e-37
Identities = 163/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| | || |||||||| || || |||||||| ||||| |
Sbjct 25465249 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCGTCT 25465308
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||||| ||| | ||||| || || |||||||||||||| || || |||||||||
Sbjct 25465309 GACACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 25465368
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||||| || ||||| || ||||| ||
Sbjct 25465369 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCCTTGCTGACTACAAC 25465428
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| || || || ||
Sbjct 25465429 ATCCAGAAGGAGTCCACCCTCCACCTTGT 25465457
Score = 165 bits (182), Expect = 9e-36
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || |||||||| ||||| ||||||||||||||
Sbjct 25465933 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACCATTACCCTTGAGGTTGAGTCGTCC 25465992
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | |||| || ||||||| || || |||||||||||||| || || || ||||||
Sbjct 25465993 GACACTATTGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 25466052
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || ||||| | || ||||| || ||||| ||
Sbjct 25466053 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACCCTTGCCGACTACAAC 25466112
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| || || || ||
Sbjct 25466113 ATCCAGAAGGAGTCCACCCTCCACCTTGT 25466141
Score = 161 bits (178), Expect = 1e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || || |||||||| || || |||||||| |||||
Sbjct 25465705 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACACTTGAGGTCGAGTCCTCG 25465764
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||||| || || |||||||||||||| || || || ||||||
Sbjct 25465765 GACACGATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 25465824
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||| | || ||||| || ||||| ||
Sbjct 25465825 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTTGCCGACTACAAC 25465884
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| ||||| || ||
Sbjct 25465885 ATCCAGAAGGAGTCCACCCTTCACCTGGT 25465913
Score = 156 bits (172), Expect = 5e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| |||||
Sbjct 25465477 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 25465536
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || ||||||| || || |||||||||||||| || || || ||||||
Sbjct 25465537 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 25465596
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || || || ||||| || ||||| | || ||||| || ||||| ||
Sbjct 25465597 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTTGCCGACTACAAC 25465656
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||||||||| || || || ||
Sbjct 25465657 ATCCAGAAGGAATCCACCCTCCACCTTGT 25465685
Score = 156 bits (172), Expect = 5e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || |||||||| |||||
Sbjct 25466161 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACGCTTGAGGTCGAGTCCTCG 25466220
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | || ||||||| || || |||||||||||||| || || || ||||||
Sbjct 25466221 GACACGATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 25466280
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| || ||||||| || ||| | || ||||| ||
Sbjct 25466281 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCTTGGCTGACTACAAC 25466340
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614
|||| ||||| ||||| ||||| || ||
Sbjct 25466341 ATCCAGAAGGAGTCCACCCTTCACCTGGT 25466369
Score = 152 bits (168), Expect = 6e-32
Identities = 152/197 (77%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | || || ||||| || ||||||| ||| |||||
Sbjct 24977119 ATGCAGATCTTTGTGAAGACCTTGACAGGAAAGACCATCACTCTTGCGGTCGAGTCCTCG 24977060
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||||| || ||||||||||||||||||||||| || ||||||
Sbjct 24977059 GACAAGATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAG 24977000
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| | ||||| |||||||||| ||||| || || || || ||
Sbjct 24976999 CAGCGCCTCATCTTTGCAGACAAGCAGCTCGAGGATGGACGTACACTGGCTGATTACAAC 24976940
Query 27586 GTCCAAAAGGAATCCAC 27602
| || ||||| |||||
Sbjct 24976939 ATTCAGAAGGAGTCCAC 24976923
Score = 122 bits (134), Expect = 1e-22
Identities = 175/244 (72%), Gaps = 2/244 (1%)
Strand=Plus/Plus
Query 64612 GTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGCT 64671
||||||||||| | || ||| | || || || || || ||||| || |||||
Sbjct 1267154 GTCGAGAAGGACCGCCTCTTCCGCGCCATCGACACCGTCCCCGCCGTGCGCCGCAAGGCC 1267213
Query 64672 GAATGGGCCATCCGGTGGATGAATCGTGGGTCGTCGTTTGGTC-AGCGTCTCGCAGCTTT 64730
|| |||||||| || ||||| | || || || || | | |||| |||| || ||
Sbjct 1267214 GACTGGGCCATGCGATGGATCGA-CGGCGGCGAGCGCTTCGCCGAGCGGCTCGTCGCCTT 1267272
Query 64731 TGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAA 64790
||||| || || || || ||||| || || |||||||| | || |||||||| || ||
Sbjct 1267273 CGCCTGCGTCGAGGGGATCTTCTTCTCGGGTTCATTCTGCGCCATCTTCTGGCTCAAGAA 1267332
Query 64791 GCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCT 64850
||| || || ||||| || || | || || |||||||| ||||| || |||||||| ||
Sbjct 1267333 GCGCGGACTCATGCCGGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCT 1267392
Query 64851 CCAC 64854
||||
Sbjct 1267393 CCAC 1267396
Score = 91.5 bits (100), Expect = 2e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 27491 AAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGC 27550
|| |||||||||| ||||| ||||| ||||||||||| | || ||||| || || ||||
Sbjct 23628735 AACTTCAGGACAAAGAGGGTATTCCCCCAGACCAGCAAAGGCTGATTTTCGCAGGGAAGC 23628794
Query 27551 AACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATC 27610
|||| || |||| ||||| |||| || || || | || || || || || || |||
Sbjct 23628795 AACTGGAAGATGGACGTACATTAGCTGATTACAACATTCAGAAAGAGTCAACGCTCCATT 23628854
Query 27611 TAGTCTTGCGTCTTCGCGGTGGA 27633
| ||| || | || | ||||||
Sbjct 23628855 TGGTCCTGAGGCTCAGGGGTGGA 23628877
>seq2
Length=33962743
Score = 185 bits (204), Expect = 1e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| || ||||| || ||||||||||| || || || ||||| ||||| |
Sbjct 3067599 ATGCAAATCTTCGTGAAGACTCTGACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCT 3067540
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| | ||||| || || |||||||||||||| ||||| || ||||||
Sbjct 3067539 GATACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3067480
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || |||||||| ||||| || ||||||| | ||||| || ||||| ||
Sbjct 3067479 CAGCGCCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAAC 3067420
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || || || | || ||||| |||||
Sbjct 3067419 ATCCAGAAGGAGTCCACCCTCCACCTTGTGCTCCGCCTTCGTGGTGG 3067373
Score = 170 bits (188), Expect = 2e-37
Identities = 178/232 (77%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | || || ||||| || ||| | ||||||||| || |
Sbjct 3067143 ATGCAGATCTTCGTGAAGACCTTGACTGGGAAGACCATCACTTTGGAGGTTGAG--AGCT 3067086
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||||| ||| ||||||| || || |||||||||||||| ||||| |||||||
Sbjct 3067085 CCGACACCATTGATAATGTGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCCCCAGACC 3067026
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||||||||| || || ||||| ||||| || ||||||| || ||||| || ||||| |
Sbjct 3067025 AGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGACGCACCCTCGCCGACTACA 3066966
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
| |||| ||||| ||||| || || || || | || || || ||||| ||
Sbjct 3066965 ACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTCCGTGGTGGTCA 3066914
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| | |||||||||||||| || || ||||| ||||| |
Sbjct 3068365 ATGCAGATCTTTGTGAAGACATTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCCTCT 3068306
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | |||||||| || || || |||||||| || || || ||||||
Sbjct 3068305 GACACCATCGATAATGTCAAGGCTAAGATCCAAGATAAGGAGGGCATCCCCCCGGACCAG 3068246
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || || ||||| ||||| || ||||||| | ||||| || ||||| ||
Sbjct 3068245 CAGCGTCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAAC 3068186
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || ||||| || ||| | || || || |||||
Sbjct 3068185 ATCCAGAAGGAGTCGACCCTTCACCTTGTCCTCCGCCTCCGTGGTGG 3068139
Score = 168 bits (186), Expect = 8e-37
Identities = 176/229 (77%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || || |||||||| || || || ||||||||| || |
Sbjct 3067371 ATGCAGATCTTTGTCAAGACCCTCACAGGCAAGACCATCACCCTGGAGGTTGAG--AGCT 3067314
Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523
|| | ||| | || | ||||| || || |||||||||||||| || || |||||||
Sbjct 3067313 CGGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACC 3067254
Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583
|||||||||| || || || || ||||| |||||||||| || ||||| || ||||| |
Sbjct 3067253 AGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTGCCGACTACA 3067194
Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||| ||||| || || || || || || | ||||| || |||||
Sbjct 3067193 ACATCCAGAAGGAGTCTACCCTCCACCTGGTGCTTCGTCTCCGTGGTGG 3067145
Score = 168 bits (186), Expect = 8e-37
Identities = 168/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || ||||||||||| || || || ||||| || || |
Sbjct 3067827 ATGCAGATCTTTGTCAAGACACTGACCGGCAAGACCATCACCCTCGAGGTGGAATCTTCT 3067768
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||||| || || |||||||||||||| ||||| || ||||||
Sbjct 3067767 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 3067708
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| || ||||| || ||||| || ||||| | | ||||| || ||||| ||
Sbjct 3067707 CAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTTGCTGACTACAAC 3067648
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623
|||| ||||| || || ||||| || ||| | |||||
Sbjct 3067647 ATCCAGAAGGAGTCAACGCTTCACCTTGTCCTCCGTCT 3067610
Score = 152 bits (168), Expect = 6e-32
Identities = 141/179 (79%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||||||||| || |||||||||||||| || |||||||| ||||| |
Sbjct 3068137 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCT 3068078
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||||| || || |||||||| ||||| || || |||||||||
Sbjct 3068077 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCAGACCAG 3068018
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||||| || || || || ||||| || ||||||| | ||||| || ||||| ||
Sbjct 3068017 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCTGACTACAA 3067959
Score = 96.9 bits (106), Expect = 4e-15
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 27505 GAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGAT 27564
||||| || || ||||||||||||||||| || || || || ||||| || |||||||
Sbjct 3067956 GAGGGCATCCCCCCAGACCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGC 3067897
Query 27565 CGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTT 27624
| ||||| || ||||| || |||| ||||| ||||| || || || ||| | || ||
Sbjct 3067896 AGGACCCTTGCTGACTACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTCCGCCTC 3067837
Query 27625 CGCGGTGG 27632
|| |||||
Sbjct 3067836 CGTGGTGG 3067829
>seq7
Length=26200591
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || ||||||||| | || || |||||||| |||||
Sbjct 10980583 ATGCAGATCTTTGTGAAGACTCTGACCGGCAAGTCCATCACCCTTGAGGTGGAGTCCTCC 10980524
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| ||||||| || || || || |||||||| ||||| |||||||||
Sbjct 10980523 GACACCATCGACAATGTGAAGGCGAAGATCCAAGATAAGGAGGGCATTCCACCAGACCAG 10980464
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| |||||||| | | ||||| || ||||| ||
Sbjct 10980463 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGAAGGATGCACCCTTGCTGACTACAAC 10980404
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| ||||| || ||||| ||| | ||||| || |||||
Sbjct 10980403 ATTCAGAAGGAGTCCACCCTCCATCTTGTCCTCCGTCTCCGTGGTGG 10980357
Score = 93.3 bits (102), Expect = 5e-14
Identities = 75/91 (82%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 146788 ACCACCTACTACCAGATGCAGACGCGCAGCGCCGACGAGCCGATGACGGCGTTCATCACC 146847
|| |||||||||||| | ||||| || ||||||||||||||||||||| ||||| | |||
Sbjct 6497939 ACTACCTACTACCAGCTCCAGACTCGGAGCGCCGACGAGCCGATGACGACGTTCGTGACC 6497880
Query 146848 TGCCTGAATTGCTCTAACCGCTGGAAGTGCT 146878
||| |||| ||| || | |||||||| ||
Sbjct 6497879 TGCGTGAACTGCAACAATCACTGGAAGTTCT 6497849
>seq1
Length=39866532
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || || ||||| || || || ||||| |||||
Sbjct 11683719 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACGATCACGCTGGAGGTGGAGTCCTCG 11683660
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || |||||||||||||| || || || ||||||
Sbjct 11683659 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGACCAG 11683600
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| || ||||| | || ||||| || ||||| ||
Sbjct 11683599 CAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACCCTCGCCGACTACAAC 11683540
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || || | || || ||||| ||
Sbjct 11683539 ATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTCCGCGGCGG 11683493
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| || || || ||||| || || || ||||| ||| |
Sbjct 23562276 ATGCAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGCTGGAGGTGGAGAGCAGC 23562335
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || || | ||||| || | |||||||||||||| || || || ||||||
Sbjct 23562336 GACACGATCCAGAACGTCAAGGCGAAGGTGCAGGACAAGGAGGGGATCCCGCCGGACCAG 23562395
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || || || ||||| || ||||| | || || || || ||||| ||
Sbjct 23562396 CAGCGGCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGGCGCACGCTGGCCGACTACAAC 23562455
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || || | || || ||||| ||
Sbjct 23562456 ATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGCGGCGG 23562502
>seq8
Length=25958679
Score = 138 bits (152), Expect = 1e-27
Identities = 165/227 (73%), Gaps = 13/227 (6%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || ||||||||| | || || ||||||
Sbjct 4542157 ATGCAGATCTTTGTGAAAACCCTGACCGGCAAGTCCATCACCCTTGAG------------ 4542110
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
| | || | ||| ||||||| || || ||||| |||||||| ||||| || ||||||
Sbjct 4542109 -ACACAATCGACAATGTGAAGGCGAAGATCCAGGATAAGGAGGGTATTCCCCCGGACCAG 4542051
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| |||||||| | || ||||| || ||||| ||
Sbjct 4542050 CAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGAAGGACGCACCCTTGCTGACTACAAC 4541991
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| || ||||| || || || ||||| ||| | ||||| || |||||
Sbjct 4541990 ATTCAGAAGGAGTCGACCCTCCATCTTGTCCTCCGTCTCCGTGGTGG 4541944
>seq9
Length=20482102
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
|| || ||||| ||||||||||| || || || || || ||||| || ||||||| ||
Sbjct 20237506 GGCATCCCTCCGGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGC 20237565
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627
||||| || ||||| || |||| ||||| ||||| || || || ||| | || || |||
Sbjct 20237566 ACCCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTCCACCTCGTCCTCCGCCTCCGC 20237625
Query 27628 GGTGG 27632
|||||
Sbjct 20237626 GGTGG 20237630
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
|| || || || |||||||||||||| || || || || ||||| |||||||||| ||
Sbjct 14668940 GGTATCCCGCCGGACCAGCAGCGTCTCATCTTCGCGGGGAAGCAGCTCGAGGATGGCCGC 14668999
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627
||||| || ||||| || | || ||||| || || ||||| || || | || || |||
Sbjct 14669000 ACCCTGGCCGACTACAACATTCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGCCTCCGC 14669059
Query 27628 GGTGG 27632
|||||
Sbjct 14669060 GGTGG 14669064
Score = 82.4 bits (90), Expect = 9e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555
||||||||||| || || |||||||| || |||||| | || || || || ||||| ||
Sbjct 12975460 CAGGACAAGGAAGGGATCCCTCCAGATCAACAGCGTTTGATATTCGCCGGCAAGCAGCTG 12975519
Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCA 27608
|| |||| || || || || ||||| || | || ||||| || ||||||||
Sbjct 12975520 GAAGATGGGCGCACACTGGCCGACTACAACATTCAGAAGGAGTCAACTCTTCA 12975572
Score = 82.4 bits (90), Expect = 9e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
|| || ||||| ||||||||||| || || || || || ||||| || ||||||| ||
Sbjct 16210756 GGTATCCCTCCGGACCAGCAGCGCCTCATCTTCGCGGGGAAGCAGCTGGAGGATGGCCGC 16210815
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627
||||| || ||||| || |||| ||||| || || || || || || | || || |||
Sbjct 16210816 ACCCTGGCCGACTACAACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTCCGC 16210875
Query 27628 GGTGG 27632
|| ||
Sbjct 16210876 GGCGG 16210880
>seq3
Length=34446443
Score = 82.4 bits (90), Expect = 9e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567
|| || || || ||||||||||| || || || || || ||||| || ||||||| ||
Sbjct 8006011 GGTATCCCGCCGGACCAGCAGCGCCTCATCTTCGCCGGGAAGCAGCTGGAGGATGGCCGC 8006070
Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627
|| || || ||||| || |||| ||||| ||||| ||||| || || | || || |||
Sbjct 8006071 ACGCTGGCCGACTACAACATCCAGAAGGAGTCCACGCTTCACCTGGTGCTTCGCCTACGC 8006130
Query 27628 GGTGGACA 27635
|| || ||
Sbjct 8006131 GGCGGCCA 8006138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570283181936160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |