Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq8 578 5e-160 seq2 464 7e-126 seq10 396 3e-105 seq4 172 7e-38 seq12 159 4e-34 seq6 105 8e-18 >seq8 Length=25958679 Score = 578 bits (640), Expect = 5e-160 Identities = 730/998 (73%), Gaps = 29/998 (3%) Strand=Plus/Plus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 ||||| |||||| |||| |||| | || ||||| || |||| ||||||||||| || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 177658 ATGATCCCTACGCTGCTCG-CTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTC 177715 || |||||||| || ||| | || || | ||| || || |||| ||| || |||| | Sbjct 20127872 ATAATCCCTAC-CTTATCGACCGCAACTTT-TGTATTTATTATCGCCTTCATCACTGCCC 20127929 Query 177716 CTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACA 177775 ||| ||| ||| || |||||| | | || || |||| Sbjct 20127930 CTCTCGTGAGCAT-------------------GTTTCTGGTTTTTTACTTTACGGAAACA 20127970 Query 177776 ACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCA 177835 | || || |||||||| || ||||| ||||| || || || | ||||| || || | Sbjct 20127971 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 20128030 Query 177836 TCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTA 177895 | |||||||| || ||| | ||||||||| | |||||||| ||||||| | || || Sbjct 20128031 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 20128090 Query 177896 TCTTCCACTTCCTGATCGGTAT--CTATGCATACATGGGTCGTGAGTGGGAACTTTCTTA 177953 | | |||||| | | ||| | || |||| ||||||||||||||||||| || Sbjct 20128091 TTCTACACTTCTTACTTGGTGTAGCTTGTCATA--TGGGTCGTGAGTGGGAACTGAGTTT 20128148 Query 177954 CCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATC 178013 ||| || ||||||||||| ||||| ||| ||||| || ||||| || || || || | Sbjct 20128149 CCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTAC 20128208 Query 178014 TGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGG 178073 |||||| ||| | ||| ||| | |||||||| ||||||||| | |||||| | || Sbjct 20128209 TGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAGG 20128268 Query 178074 TATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCA 178133 || ||| || ||||||| ||| |||| ||||| |||||||| |||||||| ||||| Sbjct 20128269 AATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGCA 20128328 Query 178134 CCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCA 178193 || || |||||||| || || |||||||| || || ||||| || |||||||| ||||| Sbjct 20128329 TCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCA 20128388 Query 178194 CGGTTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACT 178252 ||||| |||| || | || | | | || | |||||||| || |||||| | || Sbjct 20128389 TGGTTCCTTGGTAACCT-CTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATG 20128447 Query 178253 ATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACT 178312 | ||||||| || |||||||| |||||||| || || || || || ||||||||||| | Sbjct 20128448 AGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATT 20128507 Query 178313 TCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCC 178372 | || || | ||||||||||| || || |||||||| |||||| | ||||||||| Sbjct 20128508 TTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCT 20128567 Query 178373 TCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCAT 178432 | | ||| |||||||| || || || |||||||||||| | ||| |||| || ||||| | Sbjct 20128568 TGGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTT 20128627 Query 178433 TCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGA 178492 |||| || ||||| ||||| |||||||| || | | ||||| || || || | | Sbjct 20128628 TCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTA 20128687 Query 178493 ACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTA 178552 | || ||||| || | ||||||||||| ||||||||||||||| |||||||| |||| Sbjct 20128688 ATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTA 20128747 Query 178553 ATGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 ||||||||||||||||||| ||||| |||||| |||| Sbjct 20128748 ATGCTCACAACTTCCCTCTAGACCTAGCTGCTCTTGAA 20128785 >seq2 Length=33962743 Score = 464 bits (514), Expect = 7e-126 Identities = 715/1015 (70%), Gaps = 4/1015 (0%) Strand=Plus/Minus Query 178839 TTTGATGTACTCGATGACTGGCTTAAGC-GTGATCGGTTCGTTTTTGTTGGTTGGTCAGG 178897 |||||| | | || |||||| ||| | | || || || |||||||| || ||||| || Sbjct 13366837 TTTGATATTATGGACGACTGG-TTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGG 13366779 Query 178898 TCTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACAACATT 178957 || | || || ||| |||||| | || | || |||||| | || || ||||| || Sbjct 13366778 CCTATTGCTTTTTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTT 13366719 Query 178958 CGTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAATTTCCT 179017 || || || |||||||| || || | || ||| ||| | || || || |||||| | Sbjct 13366718 TGTAACTTCTTGGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTT 13366659 Query 179018 TACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTATGGGG 179077 || | || || || | ||||| | | | | ||| || | | || |||||||| Sbjct 13366658 AACCGTAGCAGTTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGG 13366599 Query 179078 TCCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCTTTTGT 179137 || ||||| || || ||||| || ||| ||| | || || |||||| ||||||| Sbjct 13366598 CCCGGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGT 13366539 Query 179138 GGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCGCACG 179197 || ||||| || || || || || |||||||||||| | || || |||||| | || || Sbjct 13366538 TGCTCTCCATGGGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 13366479 Query 179198 -TCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTG 179256 ||| || | | | ||||| |||||||| | || ||||| ||||||||||| |||| Sbjct 13366478 ATCTGTTCAATTGTGG-CCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTG 13366420 Query 179257 TGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTG 179316 | || || || | || ||||| || || || ||| ||||||||||||||| |||| Sbjct 13366419 TTTCCGTATTCCCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTG 13366360 Query 179317 GAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCA 179376 | || |||||||| || || ||| | |||||| | || || || || || |||||| | | Sbjct 13366359 GCGTAGCAGCGATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGA 13366300 Query 179377 ACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTC 179436 |||| || || |||||||| || || || | | |||| || |||| || || |||| Sbjct 13366299 ACCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 13366240 Query 179437 ATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGG 179496 |||| || || || || ||||| || ||||| ||| |||| ||||||| || Sbjct 13366239 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCA 13366180 Query 179497 CATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGT 179556 | || | || || |||| || || || ||||| ||||| || || || || || |||| Sbjct 13366179 CTTTTAACCCAACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 13366120 Query 179557 CTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTG 179616 | || ||||||||| | || || |||||| |||||| |||||||||||||| | |||| Sbjct 13366119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 13366060 Query 179617 TTCCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTA 179676 | || |||| ||| | |||| | ||||| | | || || || || ||||| Sbjct 13366059 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 13366000 Query 179677 GAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGT 179736 || |||||||| ||||| || || ||| | || || || |||||||| || ||||| | Sbjct 13365999 TTGCCTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTT 13365940 Query 179737 TCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATC 179796 |||| ||||| || || || || || | ||| | ||||| ||||||||| | |||| Sbjct 13365939 TCTACACCAAAAATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATC 13365880 Query 179797 AACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851 | || |||||||| || |||| ||||| || || ||| | || |||||||| Sbjct 13365879 AGCCTCATGAAAATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCT 13365825 Score = 154 bits (170), Expect = 2e-32 Identities = 226/320 (71%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 179379 CCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCAT 179438 || || || |||||||| || || || | | |||| || |||| || || |||||| Sbjct 18364941 CCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCAT 18365000 Query 179439 GGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGCA 179498 || || || || || ||||| || ||||| ||| |||| ||||||| ||| || Sbjct 18365001 GGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCGCT 18365060 Query 179499 TTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCT 179558 || | || || |||| || || || ||||| ||||| || || || || || ||||| Sbjct 18365061 TTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCC 18365120 Query 179559 CAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTT 179618 || ||||||||| | || || |||||| |||||| |||||||||||||| | ||||| Sbjct 18365121 CAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTA 18365180 Query 179619 CCTGTCATGGGTCTTTGGACCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAGA 179678 || |||| ||| | |||| | ||||| | | || || || || ||||| | Sbjct 18365181 CCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACGT 18365240 Query 179679 GCTTATGACTTTGTTTCACA 179698 || |||||||| ||||| || Sbjct 18365241 GCCTATGACTTCGTTTCCCA 18365260 Score = 111 bits (122), Expect = 2e-19 Identities = 126/168 (75%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 178396 ATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTC 178455 || |||||||||||| | ||| |||| || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 178456 AACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAAC 178515 ||||| || | | ||||| || || || | | || ||||| || | ||||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 178516 CGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAAC 178563 ||||| ||||| ||||||||| |||||||| |||||||||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 396 bits (438), Expect = 3e-105 Identities = 455/611 (74%), Gaps = 12/611 (2%) Strand=Plus/Plus Query 177981 TGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGCTGTATTCCTTGTTTATCCTTTCGG 178040 ||| ||||| || ||||| || || || || ||||||| ||| | |||| ||| | || Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 178041 TCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTATCAGTGGCACCTTCAACTACATGCT 178100 |||||| ||||| ||| | |||||| | || || ||| || ||||||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 178101 TGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGTTGGGCGTCGCTGG 178160 ||| ||||| ||||| || |||||||| ||||| | || |||||||| || || ||||| Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 178161 TGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGGTTCTCTGGTTACTTCCTCGCTGGT 178220 ||| || || ||||| || || ||||| ||||| ||||| |||| || || | | | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTC-TAGTTTGA 18975889 Query 178221 TCGTG-AAACCACCGAGAACGAAAGTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAG 178279 ||| | ||||||| || |||||| | || | ||||||| || |||||||| |||| Sbjct 18975890 TCGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAG 18975949 Query 178280 AGACCTACAACATCGTTGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCAT 178339 |||| || || || || || ||||||||||| || || || | ||||||||||| || Sbjct 18975950 AGACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTA 18976009 Query 178340 CCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCT 178399 || |||||||| || || | ||||||||| | || || |||||||| || || || | Sbjct 18976010 GTTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTT 18976069 Query 178400 GGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAACC 178459 |||||| |||| | ||| |||| || ||||| ||||| || ||||| ||||| ||||||| Sbjct 18976070 GGTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACC 18976129 Query 178460 AGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACCTGGGCAGACGTTCTCAACCGTG 178519 | | | | ||||| || | || || ||||| || | ||||||||| Sbjct 18976130 AATATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACCGTG 18976179 Query 178520 CTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCTCACAACTTCCCTCTTGACCTCG 178579 || ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| | Sbjct 18976180 CTAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAG 18976239 Query 178580 CTGCTGCTGAA 178590 ||||| |||| Sbjct 18976240 CTGCTCTTGAA 18976250 >seq4 Length=30521686 Score = 172 bits (190), Expect = 7e-38 Identities = 216/294 (73%), Gaps = 2/294 (1%) Strand=Plus/Minus Query 179112 CAACTTGGGGGACTATGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTC 179171 ||| | || || || ||| ||||||| || ||||| || || || || || ||||||||| Sbjct 19658511 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 19658452 Query 179172 ATGCTTCGGCAGTTTGAAATCGCACG-TCTAGTCGGTATTCGTCCTTACAATGCAATCGC 179230 ||| | | || |||||| | | || ||| || | | || ||||| |||||||| | Sbjct 19658451 ATGTTATGTCAATTTGAACTTACTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTC 19658393 Query 179231 GTTTTCTGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTC 179290 || ||||| ||||| ||| | ||||| || || || || || ||||| || || || || Sbjct 19658392 ATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 19658333 Query 179291 CTCGTGGTTCTTTGCGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCT 179350 | ||||||||||||||| ||||| || |||||||| || || ||| | |||||| | Sbjct 19658332 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCATCCTCTTCTT 19658273 Query 179351 ACAGGGCTTCCACAACTGGACGCTCAACCCGTTCCACATGATGGGTGTAGCAGG 179404 || || || || || |||||| | ||||| || || |||||||| || || || Sbjct 19658272 CCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGG 19658219 Score = 140 bits (154), Expect = 4e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 179112 CAACTTGGGGGACTATGGCCTTTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTC 179171 ||| | || || || ||| ||||||| || ||||| || || || || || ||||||||| Sbjct 7261230 CAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTAATAGGTTTC 7261289 Query 179172 ATGCTTCGGCAGTTTGAAATCGCACG-TCTAGTCGGTATTCGTCCTTACAATGCAATCGC 179230 ||| | || || |||||| | || || ||| || | | || ||||| |||||||| | Sbjct 7261290 ATGTTACGTCAATTTGAACTTGCTCGGTCTGTTCAAT-TGCGGCCTTATAATGCAATTTC 7261348 Query 179231 GTTTTCTGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTC 179290 || ||||| ||||| ||||| ||||| || || || || || ||||| || || || || Sbjct 7261349 ATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACTGGGGCAATC 7261408 Query 179291 CTCGTGGTTCTTTGCGCCGTCGTTTGGAGTTGCAGCGAT 179329 | ||||||||||||||| ||||| || |||||||| Sbjct 7261409 CGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 177797 TTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCATCTGGGAAGCAGCTTCTCTCG 177856 ||||| ||||| || || || | ||||| || || || |||||||| || ||| | | Sbjct 7243066 TTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTG 7243125 Query 177857 ATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTATCTTCCACTTCCTGATCGGTA 177916 |||||||| | |||||||||||||||| | || || | | |||||| | | ||| Sbjct 7243126 ATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTG 7243185 Query 177917 TCTATGCATACATGGGTCGTGAGTGGGAACT 177947 | | || |||||||||||||||||||| Sbjct 7243186 TAGCTTGTTATATGGGTCGTGAGTGGGAACT 7243216 >seq12 Length=23561512 Score = 159 bits (176), Expect = 4e-34 Identities = 163/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 178378 GCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAAC 178437 || |||||||| || || || |||||||||||| | ||| |||| || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 178438 CTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACACC 178497 || ||||| ||||| |||||| | || | | ||||| || || || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 178498 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATGCT 178557 ||||| || | |||| |||||| ||||||||||| ||| || ||||| |||||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 178558 CACAACTTCCCTCTTGACCTCGCTGCTGCTGAA 178590 |||||||||||||| ||||| |||||| |||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCTCTTGAA 9700943 Score = 145 bits (160), Expect = 9e-30 Identities = 206/287 (72%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 ||||| |||||| |||| |||| | || ||||| || | || ||||| ||||| || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || || |||| ||| ||||||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATCGCTGCCCC 9700433 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| | || || || || || ||||| | || |||||| | | || || ||||| Sbjct 9700434 TCCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAA 9700493 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || || |||||| | || ||||| |||||| || || || | ||||| || | || Sbjct 9700494 TATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAAT 9700553 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTT 177883 |||||||| || ||| | ||||||||| | |||||||| ||||||| Sbjct 9700554 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTT 9700600 >seq6 Length=27870862 Score = 105 bits (116), Expect = 8e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 178305 TGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCA 178364 |||||| || || || | ||||||||||| || || |||||||| ||||| | || Sbjct 8615184 TGGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACA 8615125 Query 178365 CTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCAC 178424 ||||||| | || || |||||||| || || || |||||||||||| | ||| |||| || Sbjct 8615124 CTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTAC 8615065 Query 178425 CATGGCATTCAACCTCAA 178442 ||||| ||||| || || Sbjct 8615064 TATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596278741238880