Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryza_20rufipogon_20[genbank_20GCA_5F000817225.1_202015-01-05] 3,818 sequences; 339,177,042 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq8 540 1e-148 seq2 500 1e-136 seq10 354 1e-92 seq4 183 4e-41 seq12 143 3e-29 seq6 89.7 6e-13 >seq8 Length=25958679 Score = 540 bits (598), Expect = 1e-148 Identities = 717/992 (72%), Gaps = 29/992 (3%) Strand=Plus/Plus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 ||||| |||||| |||| ||| || |||||||| || |||| |||||||| || || Sbjct 20127812 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATCGGATGGTTCGGTGTTTTG 20127871 Query 169412 ATGATCCCCTGCCTGCTGG-CAGCAACCACTTGT-TTCATCATCGCCTTCATCGGTGCTC 169469 || ||||| | ||| | | | ||||| |||| || || |||||||||||| ||| | Sbjct 20127872 ATAATCCC-TACCTTATCGACCGCAACTT-TTGTATTTATTATCGCCTTCATCACTGCCC 20127929 Query 169470 CCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACA 169529 | | ||| ||| ||| |||||| | | | || || |||| Sbjct 20127930 CTCTCGTGAGCAT-------------------GTTTCTGGTTTTTTACTTTACGGAAACA 20127970 Query 169530 ACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCA 169589 | || ||||||||||| || | || |||| || ||||| | ||||| || || | Sbjct 20127971 ATATTATCTCTGGTGCCATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAA 20128030 Query 169590 TCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTG 169649 | |||||||| ||| | | ||||| ||||| ||||| || ||||||| | || ||| Sbjct 20128031 TTTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTG 20128090 Query 169650 TCTTCCACTTCCTCATCGGCATCTATGCTT---ACATGGGTCGTGAGTGGGAATTGTCCT 169706 | | |||||| | | || | || |||| | |||||||||||||||||| || | Sbjct 20128091 TTCTACACTTCTTACTTGG--TGTA-GCTTGTCATATGGGTCGTGAGTGGGAACTGAGTT 20128147 Query 169707 ATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCT 169766 |||||||||||||| |||||||| |||||| || || ||||| |||||||| || Sbjct 20128148 TCCGTCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCGGCTGCTA 20128207 Query 169767 CCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGG 169826 | ||||||||| || ||||| |||| ||||| |||||||| | ||||||| | | Sbjct 20128208 CTGCTGTTTTCTTGAATTACCCTATTGGTCAAGGAAGTTTCTCTGATGGTATGCCTTTAG 20128267 Query 169827 GTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGC 169886 | || || || || || |||| ||| | || ||||| || ||||| |||||||| |||| Sbjct 20128268 GAATATCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCATAACATCCTTATGC 20128327 Query 169887 ACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGC 169946 | || || |||||| | ||||| || || || || || || || || || || || |||| Sbjct 20128328 ATCCATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGC 20128387 Query 169947 ACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACT 170006 | ||| | | || || || ||| | || | |||||||| || ||||| || || Sbjct 20128388 ATGGTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACTGAAAACGAATCTGCTAATG 20128447 Query 170007 ATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACT 170066 | ||||||| || |||||||| |||||||| || || || || |||||||| ||||| | Sbjct 20128448 AGGGTTACAGATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCCGCTCATGGTTATT 20128507 Query 170067 TCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCC 170126 | || || | ||||||||||| ||| || |||||||| ||||| | ||||||||| Sbjct 20128508 TTGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCGTTACACTTCTTCT 20128567 Query 170127 TCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGT 170186 | | ||| |||||||| || || || |||||||| ||| | ||| | || ||||| | Sbjct 20128568 TGGTAGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTT 20128627 Query 170187 TCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCA 170246 |||| || ||||| ||||| |||||||| || | | ||| | || ||||| || | | Sbjct 20128628 TCAATCTAAACGGATTCAATTTCAACCAATCTGTAGTTGATAGCCAAGGTCGCGTTATTA 20128687 Query 170247 ACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTA 170306 | || ||||| || | ||||||||||| |||||| |||||||| |||||||| |||| Sbjct 20128688 ATACTTGGGCTGATATCATCAACCGTGCTAATCTTGGTATGGAAGTAATGCACGAACGTA 20128747 Query 170307 ATGCTCACAACTTCCCTCTCGACCTCGCTGCT 170338 ||||||||||||||||||| ||||| |||||| Sbjct 20128748 ATGCTCACAACTTCCCTCTAGACCTAGCTGCT 20128779 >seq2 Length=33962743 Score = 500 bits (554), Expect = 1e-136 Identities = 718/1009 (71%), Gaps = 2/1009 (0%) Strand=Plus/Minus Query 170605 TGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGGTCTGGACTTCTTCTTT 170664 |||| |||||| | | | || || ||||| ||||| || |||||||| || | |||| Sbjct 13366827 TGGACGACTGGTTACGAAGGGACCGTTTTGTTTTTGTAGGATGGTCTGGCCTATTGCTTT 13366768 Query 170665 TTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCACGACATTTGTTACAAGTT 170724 |||| ||||||| | || | || || ||| |||| || || || ||||| || || Sbjct 13366767 TTCCTTGTGCTTATTTCGCTTTAGGAGGTTGGTTTACAGGGACAACTTTTGTAACTTCTT 13366708 Query 170725 GGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAATTTCCTTACAGCGGCTG 170784 |||| ||||| ||| | || ||||| || | |||||| |||||| | || | || | Sbjct 13366707 GGTATACCCATGGATTGGCGAGTTCCTATTTGGAAGGTTGCAATTTCTTAACCGTAGCAG 13366648 Query 170785 TGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTC 170844 | || | ||||| || | | | || ||| | | ||||| ||||| || || | | Sbjct 13366647 TTTCCCCCCCTGCCAATAGTTTAGCACACTCTTTGTTGCTACTATGGGGCCCGGAAGCAC 13366588 Query 170845 AGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACG 170904 | |||||||| || |||| ||| | || || || |||| |||||| || ||||| | Sbjct 13366587 AAGGGGATTTTACTCGTTGGTGTCAATTAGGTGGTCTATGGACTTTTGTTGCTCTCCATG 13366528 Query 170905 GAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTCG-TCTCGTAGGG 170963 | || ||||| || |||||||||||| | || || |||||| | ||| ||| || Sbjct 13366527 GGGCTTTTGCACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGATCT-GTTCAA 13366469 Query 170964 ATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTC 171023 | | || || |||||||| | |||||||| || || ||||| ||||| ||| ||| Sbjct 13366468 TTGTGGCCTTATAATGCAATTTCATTCTCTGGCCCAATTGCTGTTTTTGTTTCCGTATTC 13366409 Query 171024 CTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCA 171083 | || ||||| || ||||| || |||||||||| || || ||||| || ||||| Sbjct 13366408 CCGATTTATCCACTGGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCG 13366349 Query 171084 ATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCAT 171143 || || || ||| | |||||| | ||||| || || || ||||| |||| ||||||||| Sbjct 13366348 ATATTTCGATTCATCCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCAT 13366289 Query 171144 ATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACA 171203 |||||||| ||||| || | | |||| || |||| | || |||||||| | || Sbjct 13366288 ATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTCATGGGGCAACC 13366229 Query 171204 GTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACG 171263 || || || ||| | | ||| || |||||| |||| |||||| | ||| || | Sbjct 13366228 GTGGAAAACACTCTATTTGAGGACGGTGATGGTACAAATACCTTTCGCACTTTTAACCCA 13366169 Query 171264 ACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATTTTT 171323 ||||| | ||||| || ||||| |||||||| |||||||| || ||||| || || ||| Sbjct 13366168 ACTCAAGCTGAAGACACTTATTCAATGGTCACCGCTAATCGCTTTTGGTCCCAAATCTTT 13366109 Query 171324 GGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTCATG 171383 ||| | || || |||||| |||||||| |||||||||||||| ||||| || |||| Sbjct 13366108 GGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTGTACCGGTCACC 13366049 Query 171384 GGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGGCTTATGAT 171443 ||| | ||| | ||| | | || | | || || ||||| || || || ||||| Sbjct 13366048 GGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTACTTGCCTATGAC 13365989 Query 171444 TTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCTATACCAAG 171503 ||||| ||||| || | ||||| |||||||| || || ||||| ||||| ||||| Sbjct 13365988 TTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACCAAA 13365929 Query 171504 AACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAACCACATGAA 171563 || || || || || | ||| ||||||| ||||||||| | || || || |||||| Sbjct 13365928 AATATTCTTTTAAACAAGGGTATTCGTGCGTGGATGGCAGCTCAGGATCAGCCTCATGAA 13365869 Query 171564 AACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACTTTGAT 171612 || || | ||||| ||||| |||| ||| ||||| || || |||| || Sbjct 13365868 AATCTTATATTCCCTGAGGAGGTTCAACCACGTGGAAACGCTCTTTAAT 13365820 Score = 183 bits (202), Expect = 4e-41 Identities = 230/316 (73%), Gaps = 0/316 (0%) Strand=Plus/Plus Query 171133 ATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTC 171192 ||||||||||||||||||| ||||| || | | |||| || |||| | || |||| Sbjct 18364939 ATCCATTTCATATGATGGGAGTTGCCGGAGTATTAGGCGCGGCTCTGCTATGCGCTATTC 18364998 Query 171193 ATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGG 171252 |||| | || || || || ||| | | ||| || |||||| ||||| ||||| | Sbjct 18364999 ATGGGGCAACCGTGGAAAACACTCTATTTGAGGACGGTGATGGTGCAAATACCTTCCGCG 18365058 Query 171253 CATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGT 171312 | ||| || | ||||| | ||||| || ||||| |||||||| |||||||| || |||| Sbjct 18365059 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAATCGCTTTTGGT 18365118 Query 171313 CGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTG 171372 | || || |||||| | || || |||||| |||||||| |||||||||||||| |||| Sbjct 18365119 CCCAAATCTTTGGTGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGCTATTTG 18365178 Query 171373 TTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTA 171432 | || |||| ||| | ||| | ||| | | || | | || || ||||| || || Sbjct 18365179 TACCGGTCACCGGTTTATGGATGAGTGCTATTGGCGTAGTCGGCCTGGCTCTGAACCTAC 18365238 Query 171433 GGGCTTATGATTTCGT 171448 | || ||||| ||||| Sbjct 18365239 GTGCCTATGACTTCGT 18365254 Score = 96.9 bits (106), Expect = 4e-15 Identities = 123/168 (73%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 170150 ATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTC 170209 || |||||||| ||| | ||| | || ||||| ||||| || || || ||||| ||| Sbjct 14982352 ATTTGGTTCACTGCTTTAGGTATTAGGACTATGGCTTTCAATCTAAATGGGTTCAATTTC 14982293 Query 170210 AACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAAC 170269 ||||| || | | ||| | || ||||| || | | || ||||| || | ||||| Sbjct 14982292 AACCA-TCTGTAGTTGATAGCCAAGGTCGCGTTATTTATACTTGGGCTGATATCATCAAC 14982234 Query 170270 CGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAAC 170317 ||||| ||||| |||||||| |||||||| |||||||||||| || Sbjct 14982233 CGTGCAAATCTTGCTATGGAAGTAATGCACGAACGTAATGCTCACCAC 14982186 >seq10 Length=20731201 Score = 354 bits (392), Expect = 1e-92 Identities = 440/604 (73%), Gaps = 10/604 (2%) Strand=Plus/Plus Query 169735 TGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCTGTTTTCCTGGTCTACCCGTTTGG 169794 |||||| || || ||||| ||||| || || | ||||||||| || | ||||| |||| Sbjct 18975651 TGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATTGG 18975710 Query 169795 GCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATCTCGGGAACCTTTAACTACATGCT 169854 ||||| |||| ||| | ||||||| | || || || || || || |||| ||| | Sbjct 18975711 TCAAGGAAGTTTCTTTGATGGTATGCCTTTAGGAATATCTGGTACTTTCAACTTTATGAT 18975770 Query 169855 GGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCCTTCCACATGCTTGGTGTTGCGGG 169914 || ||||| || || || |||||||| ||||| | || |||||| | ||||| || || Sbjct 18975771 TGTATTCCAGGCAGATCATAACATCCTTATGCATCTATTTCACATGTTAGGTGTAGCTGG 18975830 Query 169915 AGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGTAGCCTCGTCACTTCGAGTCTTGT 169974 || || || || || || ||||| || ||||| ||| | | || || || ||| | | Sbjct 18975831 TGTATTCGGCGGTTCCCTATTTAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGAT 18975890 Query 169975 CCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGA 170034 | | |||||||| || ||||| || || | ||||||| || |||||||| ||||| Sbjct 18975891 CGGGGAAACCACTGAAAACGAATCTGCTAATGAGGGTTACAGATTTGGTCAAGAGGAAGA 18975950 Query 170035 GACCTACAACATCGTTGCCGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTC 170094 ||| || || || || |||||||| ||||| || || || | ||||||||||| ||| Sbjct 18975951 GACTTATAATATTGTGGCCGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCTAG 18976010 Query 170095 CTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTG 170154 || |||||||| || || | ||||||||| | || || |||||||| || || || || Sbjct 18976011 TTTTAACAACTCTCGATCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTG 18976070 Query 170155 GTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAACCTGAACGGTTTCAACTTCAACCA 170214 ||||| ||| | ||| | || ||||| ||||| || ||||| ||||| |||||||| Sbjct 18976071 GTTCATTGCTTTAGGTATTAGTACTATGGCTTTCAATCTAAACGGATTCAATTTCAACCA 18976130 Query 170215 GTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACCTGGGCAGACGTTCTCAACCGTGC 170274 | | | ||| | || | || || ||||| || | |||||||||| Sbjct 18976131 ATATGTAGTTGATAGCCA----------ATTAATACTTGGGCTGATATCATCAACCGTGC 18976180 Query 170275 TGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAACTTCCCTCTCGACCTCGC 170334 | |||||| |||||||| |||||||| ||||||||||||||||||||||| ||||| || Sbjct 18976181 TAATCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACCTAGC 18976240 Query 170335 TGCT 170338 |||| Sbjct 18976241 TGCT 18976244 >seq4 Length=30521686 Score = 183 bits (202), Expect = 4e-41 Identities = 224/303 (74%), Gaps = 2/303 (1%) Strand=Plus/Minus Query 170859 CGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTC 170918 || |||| ||| | || || || |||| |||||| || ||||| || || ||||| || Sbjct 19658520 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 19658461 Query 170919 ATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTCG-TCTCGTAGGGATTAGACCGTACAA 170977 |||||||||||| | | || |||||| | | ||| ||| || | | || || || Sbjct 19658460 ATAGGTTTCATGTTATGTCAATTTGAACTTACTCGGTCT-GTTCAATTGCGGCCTTATAA 19658402 Query 170978 TGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCTCT 171037 |||||| | |||||||| || |||||| | ||||| ||| ||||| || ||||| || Sbjct 19658401 TGCAATTTCATTCTCTGGCCCAATCGCTATTTTTGTTTCCGTATTCCTGATTTATCCACT 19658342 Query 171038 TGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCT 171097 ||||| || |||||||||| || || ||||| || ||||| || || || ||| | Sbjct 19658341 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGATATTTCGATTCAT 19658282 Query 171098 GCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTTGC 171157 |||||| | ||||| || || || ||||| |||| ||||||||||||||||| ||||| Sbjct 19658281 CCTCTTCTTCCAAGGATTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGC 19658222 Query 171158 AGG 171160 || Sbjct 19658221 CGG 19658219 Score = 125 bits (138), Expect = 8e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 170859 CGCTGGTTACAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTC 170918 || |||| ||| | || || || |||| |||||| || ||||| || || ||||| || Sbjct 7261221 CGTTGGTGTCAATTAGGTGGTCTGTGGACTTTTGTTGCTCTCCATGGGGCTTTTGCACTA 7261280 Query 170919 ATAGGTTTCATGCTTCGGCAGTTTGAAATCAGTC-GTCTCGTAGGGATTAGACCGTACAA 170977 |||||||||||| | || || |||||| | || |||| || | | || || || Sbjct 7261281 ATAGGTTTCATGTTACGTCAATTTGAACTTGCTCGGTCT-GTTCAATTGCGGCCTTATAA 7261339 Query 170978 TGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCTCT 171037 |||||| | |||||||| || |||||||| ||||| ||| ||||| || ||||| || Sbjct 7261340 TGCAATTTCATTCTCTGGCCCAATCGCTGTTTTTGTTTCCGTATTCCTGATTTATCCACT 7261399 Query 171038 TGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAAT 171085 ||||| || |||||||||| || || ||||| || ||||| || Sbjct 7261400 GGGGCAATCCGGTTGGTTCTTTGCGCCGAGTTTTGGCGTAGCAGCGAT 7261447 >seq12 Length=23561512 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || |||||||| || || || |||||||| ||| | ||| | || ||||| ||||| Sbjct 9700731 GCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 9700790 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 || ||||| ||||| |||||| | || | | ||| | || ||||| || | || || Sbjct 9700791 CTAAACGGATTCAATTTCAACTAATCTGTAGTTGATAGCCAAGGTCGCGTTATTAATACT 9700850 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 ||||| || | |||| |||||| |||||| |||| ||| || ||||| |||||| || Sbjct 9700851 TGGGCTGATATCATCAATCGTGCTAATCTTGGTATGGGAGTAATACACGAACGTAATACT 9700910 Query 170312 CACAACTTCCCTCTCGACCTCGCTGCT 170338 |||||||||||||| ||||| |||||| Sbjct 9700911 CACAACTTCCCTCTAGACCTAGCTGCT 9700937 Score = 138 bits (152), Expect = 1e-27 Identities = 216/309 (70%), Gaps = 0/309 (0%) Strand=Plus/Plus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 ||||| |||||| |||| ||| || |||||||| || | || ||||| || || || Sbjct 9700315 TTCTGCAACTGGATAACTAGCACCGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 9700374 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || || || ||||||||||||| ||| || Sbjct 9700375 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCT 9700434 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || | || || || || || || || | ||| |||||| | | | || || ||||| Sbjct 9700435 CCAGCAGATATTGATGGTATTCGTGAGCATGTTTCTGGTTTTTTACTTTACGGAAACAAT 9700494 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || ||||||||| | || | || |||| | || ||||| | ||||| || | || Sbjct 9700495 ATTATCTCTGGTACCATTATTCCTACTTCTACTGCGATCGGATTGCACTTTTACTCAATT 9700554 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| ||| | | ||||| ||||| ||||| || ||||||| | || |||| Sbjct 9700555 TGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGCGGTCCTTATGAGCTAATTGTT 9700614 Query 169652 TTCCACTTC 169660 | |||||| Sbjct 9700615 CTACACTTC 9700623 >seq6 Length=27870862 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 170060 GGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCAC 170119 ||||| || || || | ||||||||||| ||| || |||||||| ||||| | ||| Sbjct 8615183 GGTTATTTGGGCCGATTAATCTTCCAATATGCTAGTTTTAACAACTCTCGTTCTTTACAC 8615124 Query 170120 TTCTTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACG 170179 |||||| | || || |||||||| || || || |||||||| ||| | ||| | || Sbjct 8615123 TTCTTCTTGGCTGCTTGGCCTGTAGTAGGGATTTGGTTCACTGCTTTAGGTATTAGTACT 8615064 Query 170180 ATGGCGTTCAACCTGAA 170196 ||||| ||||| || || Sbjct 8615063 ATGGCTTTCAATCTAAA 8615047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592170137331360