Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 2e-11 >seq8 Length=47074253 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 20430 CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATAT 20489 ||| ||||| |||| ||| || | || || || ||||||||||| || || || || Sbjct 29221470 CCAGTTTTATGTTGAGAATGGGGAGCTATCCTGCCAGATGTATCAACGCTCTGCAGACAT 29221529 Query 20490 GGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACA 20549 |||||| |||||||| ||||| |||||| ||| | || || || || |||||||| || Sbjct 29221530 GGGACTTGGTGTTCCATTCAACATTGCATCATATTCTCTCCTCACTTACATGATTGCTCA 29221589 Query 20550 TGTT 20553 ||| Sbjct 29221590 AGTT 29221593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399144164929660