Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=61504503 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || || || | || || || |||| ||| |||| || ||| Sbjct 52668448 CAAGATGCAGATCTTCGTGAAGACGCTGACGGGGAAGACGATCACCCTCGAGGTGGAGAG 52668389 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || |||||||||||| | ||||| ||||| |||||||| ||||| || || || Sbjct 52668388 CAGCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCGCCGGA 52668329 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || ||| | || || | || || ||||| ||||| || | | | | | || ||| || Sbjct 52668328 CCAGCAGCGCCTCATCTTCGCGGGGAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTA 52668269 Query 24167 TAACATTCAAAAAGAATCTAC 24187 ||||| || || ||||| || Sbjct 52668268 CAACATCCAGAAGGAATCGAC 52668248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429893096149140