Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq6 107 1e-18 seq1 107 1e-18 seq4347 96.9 3e-15 seq4 93.3 3e-14 seq211 91.5 1e-13 seq7 91.5 1e-13 seq2 91.5 1e-13 seq3 87.8 1e-12 seq5 86.0 5e-12 seq9 84.2 2e-11 >seq6 Length=48101398 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | ||||| || || |||||||| || || || ||||| |||| Sbjct 37311276 GCCTCCCCTGAGACGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGC 37311217 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| || | |||||| ||||| || || |||||||| || |||| ||| Sbjct 37311216 AAGGGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGG 37311157 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| ||||| || ||| | | | || || | |||||| Sbjct 37311156 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCAGAAGACTCCAC 37311097 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || || || |||| || || || || ||||||||| Sbjct 37311096 CTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCATC 37311048 Score = 95.1 bits (104), Expect = 9e-15 Identities = 163/234 (70%), Gaps = 7/234 (3%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || |||||||||| Sbjct 37311510 CCACCCCTCAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGCA 37311451 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| || |||||||| || | ||| || |||| ||| Sbjct 37311450 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAATATGAGCCTCTGCTGGTCCGGGGGG 37311391 Query 48660 ACGCCCTCCTTGTCGCTAATCTT----TTG--TTTTACAG-AACCCACAGACTCTGACGC 48712 | |||||||||||| ||||| ||| || ||| | | | || || | Sbjct 37311390 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAGTTGTCAATGGTGTCAGAAGA 37311331 Query 48713 CTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| ||||| | || || || || || ||||| || || || ||||||||||| Sbjct 37311330 CTCAACCTCAAGGGTGATAGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 37311277 >seq1 Length=61571842 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | ||||| || || |||||||| || || || |||||||||| Sbjct 2756151 GCCTCCCCTAAGACGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAATCAGC 2756092 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || || | |||||| |||||||| || || ||||| || |||| ||| Sbjct 2756091 AAGCGTGCGCCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCCGGGGG 2756032 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| ||||| || || | | | || || | |||||| Sbjct 2756031 AATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCAC 2755972 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || || || || | || || ||||| ||||||||| Sbjct 2755971 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATC 2755923 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || ||||| ||||| || | Sbjct 3014506 CCACCCCTCAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGCA 3014565 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || ||||||||||| || ||||| ||||| ||||| || |||| ||| Sbjct 3014566 AGGGTGCGCCCATCCTCCAACTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGG 3014625 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 3014626 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 3014685 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || || |||||||||||| Sbjct 3014686 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTAACGAAAATCTGCATC 3014733 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| ||| || |||||||| || || || ||||| || | Sbjct 3009423 CCACCCCTCAGACGAAGCACCAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCA 3009482 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| |||| |||||| || || || || || | ||| || |||| ||| Sbjct 3009483 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGG 3009542 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 3009543 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 3009602 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || ||||| || || ||||| ||||||||| Sbjct 3009603 TCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATC 3009650 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| || | Sbjct 3009879 CCACCCCTCAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCTGCA 3009938 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| |||||||| || || | ||| || |||| |||| Sbjct 3009939 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGA 3009998 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 3009999 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 3010058 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || ||||| ||||||||| Sbjct 3010059 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC 3010106 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || || ||| || || |||||||| |||| || | || Sbjct 3014287 AGGCGGAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGG 3014346 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || ||||| ||||| ||||| || |||| ||| | ||||||| Sbjct 3014347 CCATCCTCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 3014406 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||||||||| | || Sbjct 3014407 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTG 3014466 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || || ||||| || || || || ||||||||| Sbjct 3014467 ATGGTCTTGCCAGTCAAGGTCTTAACGAAGATCTGCATC 3014505 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| |||| Sbjct 3009651 CCACCCCTCAGGCGAAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCAGCA 3009710 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| |||||||| || || | ||| || |||| ||| Sbjct 3009711 AGGGTGCGTCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 3009770 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 3009771 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCCACC 3009830 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || ||||| ||||||||| Sbjct 3009831 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACAAAGATCTGCATC 3009878 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| || | Sbjct 2756606 CCACCCCTCAGGCGGAGCACCAGGTGGAGTGTGCTCTCCTTCTGGATGTTGTAGTCCGCA 2756547 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| ||||| ||||| || |||| ||| Sbjct 2756546 AGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 2756487 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || ||| | | | || || ||| ||| Sbjct 2756486 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACC 2756427 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || ||||| || || || || |||||||| Sbjct 2756426 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2756380 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| || | Sbjct 2756834 CCACCCCTCAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGCA 2756775 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| ||||| ||||| || |||| ||| Sbjct 2756774 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 2756715 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || ||| | | | || || ||| ||| Sbjct 2756714 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAGCTCTCAACC 2756655 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || ||||| || || || || |||||||| Sbjct 2756654 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 2756608 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| || | Sbjct 3010107 CCACCCCTCAGGCGGAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCA 3010166 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| |||||||| || || | ||| || |||| ||| Sbjct 3010167 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 3010226 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 3010227 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACC 3010286 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || ||||| ||||||||| Sbjct 3010287 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCATC 3010334 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| || | Sbjct 3014734 CCACCCCTCAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGCA 3014793 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| |||||| ||||| || || || | ||| || |||| |||| Sbjct 3014794 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGCCTCTGCTGGTCCGGGGGA 3014853 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 3014854 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 3014913 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || ||||| ||||||||| Sbjct 3014914 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCATC 3014961 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | ||||| || || |||||||| ||||| || ||||| |||| Sbjct 2550121 GCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGCTCTCCTTTTGGATGTTGTAGTCAGC 2550180 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || |||| || | |||||| ||||| || || || ||||| || || | || Sbjct 2550181 AAGCGTGCGCCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGG 2550240 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| ||||| || || | | | || || | |||||| Sbjct 2550241 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 2550300 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || || || || | || || || || ||||||||| Sbjct 2550301 CTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATC 2550349 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| || || |||||||| |||| || | || Sbjct 3009204 AGACGAAGCACCAGGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGG 3009263 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || ||||| ||||| ||||| || |||| ||| | ||||||| Sbjct 3009264 CCATCCTCCAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 3009323 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || ||| ||||| | || Sbjct 3009324 TTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTG 3009383 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || || ||||| || || ||||| ||||||||| Sbjct 3009384 ATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATC 3009422 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || ||| ||||| || ||||| || | || | ||| | || || Sbjct 52872105 ACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGACCATCCTCT 52872164 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| || || | ||| || |||| ||| | |||||||||||| Sbjct 52872165 AGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 52872224 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| ||| ||| | | | ||| | ||||||||||| || || || || Sbjct 52872225 ATCTTGGCTTTGACATTGTCAATGGTGTCTAAGCTCTCCACCTCCAGGGTGATGGTCTTC 52872284 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || | || || ||||| ||||||||| Sbjct 52872285 CCAGTGAGGGTCTTAACAAAGATCTGCATC 52872314 >seq4347 Length=1781 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | || | ||||| || || |||||||| || || || ||||| || | Sbjct 554 CCACCCCTCAAGCGGAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGCA 495 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || | || |||| |||||| |||||||| || || | ||| || |||| |||| Sbjct 494 AGAGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGA 435 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 434 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 375 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || ||||| ||||||||| Sbjct 374 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCATC 327 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| || | Sbjct 1010 CCACCCCTCAGGCGAAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGCA 951 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| |||| |||||| || ||||| || || | ||| || |||| ||| Sbjct 950 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 891 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 890 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACC 831 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || || |||||||||||| Sbjct 830 TCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTAACGAAAATCTGCATC 783 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| || || || ||||| || | || | || Sbjct 1229 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGG 1170 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||| || ||||| ||||| ||||| || |||| ||| | ||||||| Sbjct 1169 CCATCCTCCAGCTGCTTGCCTGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 1110 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||||||||| | || Sbjct 1109 TTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGGACTCCACCTCGAGGGTG 1050 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || || || ||||| || || ||||| ||||||||| Sbjct 1049 ATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATC 1011 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || ||||| || | Sbjct 782 CCACCCCTCAGGCGGAGCACCAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGCA 723 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| |||||| |||||||| || || | ||| || |||| ||| Sbjct 722 AGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 663 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| || || | | | || || | ||||||| Sbjct 662 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 603 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || || || | || || || || ||||||||| Sbjct 602 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTAACGAAGATCTGCATC 555 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||||| || || |||||||| || || || |||||||| | Sbjct 1696 CCACCCCTCAGGCGAAGCACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGCA 1637 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || |||| || | |||||| || ||||| || || | ||| || |||| ||| Sbjct 1636 AGGGTGCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGGG 1577 Query 48660 ACGCCCTCCTTGTC 48673 | |||||||||||| Sbjct 1576 ATGCCCTCCTTGTC 1563 >seq4 Length=49548238 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| |||| || |||||||| || || ||| || ||||| |||||||||| | Sbjct 4633267 CCACCCCTGAGCCTCAGGACCAAATGAAGTGTTGACTCCTTCTGAATGTTGTAATCAGCT 4633326 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | ||| | || ||||| |||||||| ||||| ||||| | || || || | |||| Sbjct 4633327 AATGTTCTCCCATCTTCCAATTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGGGGA 4633386 Query 48660 ACGCCCTCCTTGTC 48673 | |||||||||||| Sbjct 4633387 ATGCCCTCCTTGTC 4633400 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| || || || ||||| || | || | ||| Sbjct 2544545 AGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGA 2544604 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| ||||| ||||| || |||| ||| | ||||||| Sbjct 2544605 CCATCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 2544664 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||||||||||| || Sbjct 2544665 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAGTGTG 2544724 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| |||||||| Sbjct 2544725 ATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 2544762 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || || ||| ||| || || || ||||| || | || | || Sbjct 2545001 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGG 2545060 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| || ||||| ||||| ||||| || |||| ||| | ||||||| Sbjct 2545061 CCGTCCTCAAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGGGGGATGCCCTCC 2545120 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||||||||||| || Sbjct 2545121 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAGTGTG 2545180 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| |||||||| Sbjct 2545181 ATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 2545218 >seq211 Length=21435 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || |||||| || ||||||||||||| || | || | || ||| Sbjct 1492 ACCAAGTGAAGAGTAGACTCTTTCTGGATATTGTAATCAGCTAATGTCCGCCCATCCTCC 1433 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| || | |||||| || |||| || | |||||||||||| Sbjct 1432 AGCTGCTTTCCAGCAAAGATGATTCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGG 1373 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || ||| | | | || || ||| ||||| | ||| || || || Sbjct 1372 ATCTTTGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACCTCGAGCGTGATAGTCTTC 1313 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || | || || ||||| ||||||||| Sbjct 1312 CCAGTAAGTGTCTTCACAAAGATCTGCATC 1283 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || |||| || | || || || ||| ||||| || ||||| || | Sbjct 827 GCCACCCCTCAGACGCAGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCTGC 768 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | ||| | || || | |||||| || ||||| || || | ||| || |||| ||| Sbjct 767 CAGGGTGCGACCATCCTCTAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGGGGG 708 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | |||||||||||| ||||| ||| ||| | | | ||| | |||||| Sbjct 707 GATGCCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCTAAGCTCTCCAC 648 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||||| || || || || || || | || || ||||| ||||||||| Sbjct 647 CTCCAGGGTGATGGTCTTCCCAGTGAGGGTCTTAACAAAGATCTGCATC 599 >seq7 Length=46770411 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || || |||||| || ||||||||||||| || | || | || ||| Sbjct 21031079 ACCAAGTGAAGAGTAGACTCTTTCTGGATATTGTAATCAGCTAATGTCCGCCCATCCTCC 21031138 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || ||||| || | |||||| || |||| || | |||||||||||| Sbjct 21031139 AGCTGCTTTCCAGCAAAGATGATTCGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTGG 21031198 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || ||| | | | || || ||| ||||| | ||| || || || Sbjct 21031199 ATCTTTGCCTTGACATTGTCAATTGTGTCAGAGCTCTCGACCTCGAGCGTGATAGTCTTC 21031258 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || | || || ||||| ||||||||| Sbjct 21031259 CCAGTAAGTGTCTTCACAAAGATCTGCATC 21031288 >seq2 Length=61504503 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| |||| | ||||| || || || ||| || ||||| ||||| |||| Sbjct 46523745 GCCACCCCTGAGCCTGAGGACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGC 46523686 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| |||||| |||||||||||||| ||||||||||||| || Sbjct 46523685 CAGTGTGCGTCCATCCTCCAGCTGCTTGCCGGCAAATATCAGGCGCTGTTGATCCGGAGG 46523626 Query 48659 AACGCCCTCCTTGTC 48673 | || |||||||| Sbjct 46523625 GATCCCTTCCTTGTC 46523611 >seq3 Length=64463019 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||||| || || ||| ||| || || || ||||| || | Sbjct 8444676 CGCCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 8444617 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || |||| || | |||||| ||||| || || || ||||| || |||| | Sbjct 8444616 CGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCCGGCG 8444557 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || || | | | || || | ||||| Sbjct 8444556 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCA 8444497 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 |||||| ||| || || || ||||||| || || || || ||||||||| || Sbjct 8444496 CCTCCAACGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 8444444 >seq5 Length=59822759 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/222 (68%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||| || ||||| ||| || || || ||||| || | || | || Sbjct 47572628 AGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGG 47572687 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | |||||| ||||| || || || ||||| || |||| || | ||||||| Sbjct 47572688 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 47572747 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | || || | ||||||||||| ||| Sbjct 47572748 TTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTG 47572807 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGTG 48770 || || || ||||||| || || || || ||||||||| || Sbjct 47572808 ATGGTCTTCCCCGTCAGGGTCTTCACGAAGATCTGCATCTTG 47572849 >seq9 Length=72259479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 9094 TGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAACAGCACC 9153 || || |||| ||| || |||||| | ||||| ||||| || || ||||| || | Sbjct 9215036 TGGGCGATCCGGTCGCCGGGCTTCACGGCGAAGTCCGTGTCCGAGTGGTTGAAGAGGATG 9215095 Query 9154 ACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGC 9213 || || ||| || | ||| ||| | |||||||| || || |||||||||||| ||||| Sbjct 9215096 ACCCCGACGGGGCCGCGGTAGTCCGCGTCGATCACGCCCGCGCCCACGTCGATGGAGTGC 9215155 Query 9214 TTGACCGCTAGTCCAGAGCGGGGCGC 9239 || | ||| || || || | ||||| Sbjct 9215156 TTCAGCGCCAGCCCCGACCTCGGCGC 9215181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380899585760724