Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq7 235 7e-56 seq4 233 2e-55 seq5 141 1e-27 seq9 140 4e-27 seq6 131 2e-24 seq3 118 1e-20 seq1 118 1e-20 seq8 109 7e-18 seq2 100 3e-15 seq1891 95.1 1e-13 >seq7 Length=46770411 Score = 235 bits (260), Expect = 7e-56 Identities = 227/291 (78%), Gaps = 3/291 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||||| | | |||| || || | Sbjct 35944928 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGCGCCTCCGCGACCT 35944987 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||||| ||| ||| ||||||||| ||||||||||||| |||||||| Sbjct 35944988 GCACGTCGGACATGAAGCGGGAGGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGA 35945047 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGAC---ACCCAGT 869807 | || || || ||||| ||| ||||||||||||||| | ||||| | |||||| Sbjct 35945048 AGAAGGCGAGCACGTGGGAGATGAAGTGGCGCTCGTCGGGGGAGAGCGCCGCGTCCCAGT 35945107 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 || | |||||| |||||||||||||||||| ||||||| || ||| | ||||| | Sbjct 35945108 GGCGCGCGTCGGCCGAGAGGTCCACCTCCTCGGCCGTCCAGAAGGACGCCACCGCCTTCT 35945167 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGT 869918 |||| | |||||| | ||| |||| ||||| ||||| | | ||||||| Sbjct 35945168 TGTAGAACTCCCAGATCTGCGGGTACCGGATCGGGAACATGGAGAAGCGGT 35945218 Score = 214 bits (236), Expect = 2e-49 Identities = 239/314 (76%), Gaps = 4/314 (1%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| |||||| || |||||| |||||| |||||||||||||||| |||||||| Sbjct 35944335 CGCCTTCTGGTACTCCCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGAT 35944394 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC-TTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||||||| ||| ||||||| || | || || ||| | | || |||| | Sbjct 35944395 GAGCTCCATCCAGTCGAAGGGGTTGG-CGACGTTATACATCTTCTTGTGGCCCAGCGCCA 35944453 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||| Sbjct 35944454 TGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGCCGCCGTTCATTCCGA 35944513 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| || || |||| |||| || ||||| |||||| |||||||| ||| ||| Sbjct 35944514 CGAGCGCGACGGGGAGCGCGTCGCAGACGAACTCGCGCTCGATGTCGACGGCGTCGGCGA 35944573 Query 868929 TGATCTGCCTGGGCACGTCGGCCG-AGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 ||||| | || | || | || | ||||| | ||| | |||||| |||||| Sbjct 35944574 CGATCT-CGCGGACGCGGCCCTCGTCGAGCTTGCCGCGGAGGAGATCGTAGAGGAGGCAG 35944632 Query 868988 GCAAAGTCGCAGTG 869001 || ||||||||||| Sbjct 35944633 GCGAAGTCGCAGTG 35944646 Score = 205 bits (226), Expect = 1e-46 Identities = 217/285 (76%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| ||| || |||||||||||||||||| Sbjct 35944651 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGACCCGGCATGAGGCCGCGCTTC 35944710 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||||||||||||| ||| ||| Sbjct 35944711 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCGACGCAGGCGAAG 35944770 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| |||||||| ||| || ||| || || |||||| ||| |||||| Sbjct 35944771 GCGACGAGGCGCTCGGCGAAG----CGCTCCCCGCC--GTCGATCCAGCGCATGGCCCAG 35944824 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | ||| | || || |||||||||||||| |||||| ||||||| ||| Sbjct 35944825 TCGGCCTTGCGGCGCACGGCGGGGACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 35944884 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || ||| || ||||| || | ||| ||||| || ||||| Sbjct 35944885 GCGCCGTCGCGGATGTAGGTCTCCAGCAGCAGCGAGTACATCTCC 35944929 >seq4 Length=49548238 Score = 233 bits (258), Expect = 2e-55 Identities = 242/316 (77%), Gaps = 6/316 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| |||||| |||||| |||||||||||||||| |||||||| Sbjct 42841965 GCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGCAGCGAGATG 42842024 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||||||| ||| ||||||| | ||||| ||| ||| ||||||| | | Sbjct 42842025 AGCTCCATCCAGTCGAAGGGGTTGGCGGCGTTGTACATCTTCCTGCACCCGAGCGCCATG 42842084 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||||||||| |||||||||||||||| ||||||| || |||||||||||| | Sbjct 42842085 AGCAGGCGGTCGGCGACGAACTCGATGTACTGGCTCATGAGGGCGCCGTTCATGCCGACG 42842144 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 ||||| || || |||| |||| || ||||| |||||| |||||||| ||| ||| | Sbjct 42842145 AGCGCGACGGGGAGCGCGTCGCAGACGAACTCGCGCTCGATGTCGACGGCGTCGGCGACG 42842204 Query 868931 ATCTGCCTGGGCACGTCGGCC---GAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987 |||| | | ||| |||| | ||||| || ||| | |||||| |||||| Sbjct 42842205 ATCT---CGCGGACGCGGGCCTCGTCGAGCTTGCTGCGGAGGAGGTCGTAGAGGAGGCAG 42842261 Query 868988 GCAAAGTCGCAGTGCA 869003 || ||||||||||||| Sbjct 42842262 GCGAAGTCGCAGTGCA 42842277 Score = 217 bits (240), Expect = 2e-50 Identities = 223/291 (77%), Gaps = 3/291 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||||||||||||||||||||||||||||||||| ||||||| | |||| || || | Sbjct 42842557 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCCCGCGCCTCGGCGACCT 42842616 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || |||||| || || ||||||||| ||||||||||||| |||||||| Sbjct 42842617 GCACGTCGGACATGAAGCGCGAAGCGAGGTTCTCGAGCACGATGCCGTCGGAGGCGGCGA 42842676 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGAC---ACCCAGT 869807 | || || || ||||| || ||||||||||||||| | |||| | |||||| Sbjct 42842677 AGAAGGCGAGCACGTGGGAGACGAAGTGGCGCTCGTCGGGGGACAGCGCCTCGTCCCAGT 42842736 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | ||||||| |||||||||||||||||| ||||||| || ||| | ||||| | Sbjct 42842737 GCCGCGCGTCGGCGGAGAGGTCCACCTCCTCGGCCGTCCAGAAGGACGCCACCGCCTTCT 42842796 Query 869868 TGTACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGT 869918 |||| | |||||| | ||| || | ||||| ||||| | | ||||||| Sbjct 42842797 TGTAGAACTCCCAGATCTGCGGGAAACGGATCGGGAACATGGAGAAGCGGT 42842847 Score = 208 bits (230), Expect = 9e-48 Identities = 217/285 (76%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||| | |||||| |||| |||||| |||||||||||||||||| Sbjct 42842280 CCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCCGGCATGAGGCCGCGCTTC 42842339 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||||||| |||||||||||||| ||||||||| ||||||||||| ||| ||| ||| Sbjct 42842340 TTGAGCCAGAAGATGGCGCAGAAGGAGCCCGAGAAGAAGATGCCCTCAACGCAGGCGAAG 42842399 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| |||||||| ||| ||| ||| || |||||| ||| |||||| Sbjct 42842400 GCGACGAGGCGCTCGGCGAAGCGCTCGCCGCC------GTCGATCCAGCGCATGGCCCAG 42842453 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 |||||||| | || | ||||| |||||||||||||| |||||| ||||||| ||| Sbjct 42842454 TCGGCCTTGCGGCGGACGGCGGGCACGGTGTCGATGGCGCGGAAGAGGCGGTCCTTCTCG 42842513 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || ||| || ||||| |||| ||| ||||| || ||||| Sbjct 42842514 GCGCCGTCGCGGATGTAGGTCTCGAGCAGCAGCGAGTACATCTCC 42842558 Score = 87.8 bits (96), Expect = 2e-11 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 1592135 GACAAGGAGTTTTGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAAC 1592194 ||||||| ||| ||| ||||| | ||| || | || | | || ||||||||| Sbjct 3963911 GACAAGGCGTTCATCGAGGTCGACACGGACACGCTGTACGACCTCCTGCTGGCCGCCAAC 3963852 Query 1592195 TACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAG 1592254 ||||||||| ||||| | ||||| || || | ||| || || ||| ||||||||| | Sbjct 3963851 TACCTCGACGTCAAGACGCTGCTGGACCTCTGCTGCCAGAAGGTCGCCGACATGATCAGG 3963792 Query 1592255 GGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||| |||| ||| ||||| | |||| || |||||| ||| Sbjct 3963791 GGCAAGACGCCGGAGCAGATCAGGCAGACGTTCGGGATCAAGAACG 3963746 >seq5 Length=59822759 Score = 141 bits (156), Expect = 1e-27 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || |||||||| | ||||||||||||||| | | ||| ||| Sbjct 55316372 GCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGTG 55316431 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||| || |||| || | |||||||| | ||| |||| |||||| Sbjct 55316432 GGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCG 55316491 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||| ||||||||||||| ||||| | |||| ||||||||| | ||||||||||||| Sbjct 55316492 TTGATGAACGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACC 55316551 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||| ||||| Sbjct 55316552 TGCTTCAGCACCTTGAAGATG 55316572 Score = 141 bits (156), Expect = 1e-27 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || |||||||| | ||||||||||||||| | | ||| ||| Sbjct 55369224 GCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGTG 55369165 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||| || |||| || | |||||||| | ||| |||| |||||| Sbjct 55369164 GGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGATGTCG 55369105 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 |||| ||||||||||||| ||||| | |||| ||||||||| | ||||||||||||| Sbjct 55369104 TTGATGAACGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCACC 55369045 Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548 ||||| ||||||||| ||||| Sbjct 55369044 TGCTTCAGCACCTTGAAGATG 55369024 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || |||||||| | ||||||||||||||| | | || Sbjct 55328299 GCTTGGCGAGCTCGCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGA 55328240 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || | |||||||| | ||| |||| | Sbjct 55328239 TGGTGGGCTTCTTGTTGTAGCGCGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 55328180 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| ||||| | |||| ||| ||||| | ||| |||| Sbjct 55328179 TGTCGTTGATGAACGAGTTCATGATGGACATGGCCTTGGAGGAAATGCCGATGTCAGGGT 55328120 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| ||||||||| ||||| Sbjct 55328119 GCACCTGCTTCAGCACCTTGAAGATG 55328094 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| | | || ||||| |||| ||||||||||||||| | | || Sbjct 17611746 GCTTGGCGAGCTCCCCGGGGAGGACAAGGCGGACGGAGGTCTGGATCTCGCGGGAGGTGA 17611687 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || | || || | |||||||| | ||| |||| | Sbjct 17611686 TAGTGGGCTTCTTGTTGTAGCGGGCGAGCTTGGCGGCCTCGCCGGCGAGCTTCTCGAAGA 17611627 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | |||| ||||||||| | ||| |||| Sbjct 17611626 TGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGGGT 17611567 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||| ||||| Sbjct 17611566 GCACCTGCTTGAGCACCTTGAAGATG 17611541 Score = 131 bits (144), Expect = 2e-24 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || |||||| | | || || ||||| | |||||||||||| || | | || Sbjct 5901544 GCTTGGCGAGCTCGCCGGGGAGGACGAGTCGCACCGAGGTCTGGATCTCCCGGGAGGTGA 5901485 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| || |||| || ||| ||||||| | ||| |||| | Sbjct 5901484 TGGTGGGCTTCTTGTTGTAGCGCGCGAGGCGGGCGGCCTCCTGGGCGAGCTTCTCGAAGA 5901425 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| ||||| | |||| |||||| || | ||| |||| Sbjct 5901424 TGTCGTTGATGAACGAGTTCATGATGGACATGGCCTTGGAGGAGATACCAATGTCCGGGT 5901365 Query 1254523 GCACCTGCTTGAGCACCTTGTAGAT 1254547 ||||||||||||| |||||| |||| Sbjct 5901364 GCACCTGCTTGAGGACCTTGAAGAT 5901340 Score = 89.7 bits (98), Expect = 6e-12 Identities = 80/99 (81%), Gaps = 6/99 (6%) Strand=Plus/Plus Query 292398 ATCGAGCCCGACCGCGAGGTGCGCAAG---GCCATGAACGACATCAACGCGGCAGCGCGC 292454 ||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||| Sbjct 17460753 ATCGAGCCCGA---CGAGGTGGTGAAGCGCGCCATGAACGACATCAACGCGGCGGCGCGG 17460809 Query 292455 CAGCGCATGGCCGCTCTGGACCGCGCCGAGGCCGACAAG 292493 | |||| |||| || ||| |||||||||||||| ||| Sbjct 17460810 CTGCGCGTGGCGGCGGCGGAGCGCGCCGAGGCCGAGAAG 17460848 >seq9 Length=72259479 Score = 140 bits (154), Expect = 4e-27 Identities = 158/208 (76%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || ||||| | | || |||||||||| ||||||||||||||| | | || Sbjct 62587082 GCTTGGCGAGCTCGCCAGGAAGGACGAGGCGCACGGAGGTCTGGATCTCGCGGGAGGTGA 62587141 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCG-GTGCC-GATGCGGTCGAT 1254460 | ||| |||||| || | || || ||| ||||||| | ||| | | | |||| Sbjct 62587142 TGGTGGGCTTCTTGTTGTAGCGGGCGAGGCGGGCGGCCTCCTGCGCCAGCTTC--TCGAA 62587199 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 |||||||||| || |||||||||| ||||| | |||| ||||||||| | ||| || Sbjct 62587200 GATGTCGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGG 62587259 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||||||||| ||||| Sbjct 62587260 GTGCACCTGCTTGAGCACCTTGAAGATG 62587287 Score = 95.1 bits (104), Expect = 1e-13 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 1572380 CCGGTCGAGCCAAAGCCGCCGCTGCCGCGCTCGGTGTCGTCCAGCGAGTCGACCCACTCG 1572439 ||||| || || || || || ||||||| ||||| |||| || || ||| | || Sbjct 9214943 CCGGTGGATCCGAACCCTCCCTCGCCGCGCACGGTGGCGTCGAGGTCCTCCACCTCCGCG 9215002 Query 1572440 GGCTCGGGTTGGGCAATCTTTTCGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACA 1572499 ||| || || ||| ||||||| || ||||||||| || | || || || Sbjct 9215003 ACCTCCGGCGCCGCGATCACCTCGATGATCATCTGGGCGATCCGGTCGCCGGGCTTCACG 9215062 Query 1572500 ACGTGGTCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCA 1572559 || ||| | ||| | |||||||||||| | ||| || || |||||| ||||| || Sbjct 9215063 GCGAAGTCCGTGTCCGAGTGGTTGAAGAGGATGACCCCGACGGGGCCGCGGTAGTCCGCG 9215122 Query 1572560 TCGATGACGCCTGCGCCGACGTCGATG 1572586 ||||| ||||| ||||| ||||||||| Sbjct 9215123 TCGATCACGCCCGCGCCCACGTCGATG 9215149 Score = 91.5 bits (100), Expect = 2e-12 Identities = 225/332 (68%), Gaps = 22/332 (7%) Strand=Plus/Plus Query 1349424 GCGGTCGGCG--GCCAAGGGCGTCGCCTACCTGCACG--GTCT-CGACCCGCCCATCGTG 1349478 ||| ||||| ||||||||| |||||||||| |||| | || | |||| | ||| | Sbjct 49294028 GCGCTCGGCTCCGCCAAGGGCCTCGCCTACCTCCACGAGGACTGCCACCCCCGGATCATC 49294087 Query 1349479 CACCGCGACCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCC 1349538 ||||||||| ||||| || |||| | ||| | ||| | |||| | | | || ||||||| Sbjct 49294088 CACCGCGACATCAAGGCCGCCAACATCCTGCTGGACAACAACTTCGAGGCCATGGTGGCC 49294147 Query 1349539 GACTTTGGCCTGGC---GCGCATTAAGGAGGACAACGC-CAC--GATGACCCGCTGC--- 1349589 ||||| || || || || || | ||| |||| | ||| | ||||||| | Sbjct 49294148 GACTTCGGGCTTGCCAAGCTCACCACGGACACCAACACGCACGTGTCGACCCGCGTCATG 49294207 Query 1349590 GGCACGCCCTGCTGGACGGCGCCCGAGGTCATACGCGGCGAGCGCTA---CGAC-GAGCG 1349645 ||||| | ||| |||||| ||| |||||| | |||| | ||| || || Sbjct 49294208 GGCACCTTCGGCTACCTGGCGCCGGAG----TACGCGTCCAGCGGCAAGCTGACGGACCG 49294263 Query 1349646 GGCCGACGTCTACTCATTTGGCATCATCGCGTGGGAGGTGCTCACGCGCCGCCGCCCCTA 1349705 | ||||||||| ||| || ||| | || | |||| ||||||| | || || ||| Sbjct 49294264 GTCCGACGTCTTCTCCTTCGGCGTGATGCTGCTGGAGCTGCTCACCGGGCGGCGGCCCAT 49294323 Query 1349706 CGACGGCCTCAATTTCATGAACGTGAGCCTCG 1349737 |||| | ||| | |||| | | ||||||| Sbjct 49294324 CGACACCACCAACTACATGGAGGACAGCCTCG 49294355 Score = 87.8 bits (96), Expect = 2e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 1347607 GTCGTCCACCGCGACCTCAAGTCGCTCAACGTGCTCCTCGACGCCAAGTGGAACGCCAAG 1347666 ||| ||||||||||| |||||||| |||||||||||||||| |||| | |||||||| Sbjct 69535763 GTCATCCACCGCGACGTCAAGTCGAGCAACGTGCTCCTCGACACCAACATGGACGCCAAG 69535822 Query 1347667 ATCTCAGACTTTGGCCTCACGCAGTGGTCGGCGCGCGCCCGCACG 1347711 ||| | ||||| ||||| ||| ||| |||||| |||||| Sbjct 69535823 ATCGCCGACTTCGGCCT--CGCCCGCGTCATGGCGCGCGCGCACG 69535865 >seq6 Length=48101398 Score = 131 bits (144), Expect = 2e-24 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || ||| | | || |||||||||| ||||||||||||||| | | || Sbjct 42390275 GCTTGGCGAGCTCCCCGGGGAGGACGAGGCGCACGGAGGTCTGGATCTCGCGGGAGGTGA 42390334 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCG-ATGCGG-TCGAT 1254460 | ||| |||||| | |||| || | | ||||||| ||| | || |||| Sbjct 42390335 TGGTGGGCTTCTTGTTGTACCGCGCGAGCTTGGCCGCCTCGG--CCGCAAGCTTCTCGAA 42390392 Query 1254461 CATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGG 1254520 |||||||||| ||||||||||||| ||||| | |||| ||||||||| | ||| || Sbjct 42390393 GATGTCGTTGATGAACGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCCGG 42390452 Query 1254521 GTGCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||| ||||||||| ||||| Sbjct 42390453 GTGCACCTGCTTCAGCACCTTGAAGATG 42390480 >seq3 Length=64463019 Score = 118 bits (130), Expect = 1e-20 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 || || |||||| | | || ||||| || | ||||||||||||||||| ||| ||| Sbjct 16300188 GCGAGCTCGCCGGGGAGGACGAGGCGGACCGAGGTCTGGATCTCGCGCGACGTGATGGTG 16300247 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGC-CGATGCGGTCGATCATGTC 1254466 |||||| | || || || | ||||| ||| ||| |||| ||||| Sbjct 16300248 GGCTTCTTGTTGTACCTGGCGAGGCGCGCCGCCTCC-TGCGCGAGCTTCTCGAAGATGTC 16300306 Query 1254467 GTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCAC 1254526 ||||| ||||||||||| | |||||| | |||| ||||||||| | ||| |||||||| Sbjct 16300307 GTTGATGAACGAGTTCATAATCGACATGGCCTTGGAGGAGATGCCGATGTCCGGGTGCAC 16300366 Query 1254527 CTGCTTGAGCACCTTGTAGATG 1254548 |||||||||||||||| ||||| Sbjct 16300367 CTGCTTGAGCACCTTGAAGATG 16300388 Score = 114 bits (126), Expect = 2e-19 Identities = 130/172 (76%), Gaps = 7/172 (4%) Strand=Plus/Plus Query 1349383 TCGGGCCAGCGCCTGGCCTTTGGCCTGAGGCTGCGCATGCTGCGGTCGGCG--GCCAAGG 1349440 || ||| |||||||| || | | | |||| || || ||| |||||| ||||||| Sbjct 3906819 TCCGGCGTGCGCCTGGACTGGCGGCGGCGGCTCCGGGTGGTGC--TCGGCGCCGCCAAGG 3906876 Query 1349441 GCGTCGCCTACCTGCACGGTCTCG---ACCCGCCCATCGTGCACCGCGACCTCAAGAGCG 1349497 ||||||||||||| |||| |||| ||||||||||||||||||||||| ||||| | Sbjct 3906877 GCGTCGCCTACCTCCACGAGCTCGCCGACCCGCCCATCGTGCACCGCGACATCAAGTCCA 3906936 Query 1349498 GCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCCT 1349549 ||||| | || ||||| | | ||||| |||||| ||||||| ||||| Sbjct 3906937 GCAACGTCCTCCTCGACGAGCGCCTCAACGCCAAGGTCTCCGACTTCGGCCT 3906988 Score = 102 bits (112), Expect = 1e-15 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 1592135 GACAAGGAGTTTTGCGACGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAAC 1592194 |||| |||||| ||||||||| ||| |||| || | || ||| | || ||||||||| Sbjct 17639227 GACAGGGAGTTCATCGACGTCGACCAGGCCACGCTGTACGACTTGGTGCTAGCCGCCAAC 17639286 Query 1592195 TACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAG 1592254 |||||| || ||||| ||||| || || ||| || | || ||||||||||| Sbjct 17639287 TACCTCAACGTCAAGGGGCTGCTGGACCTCATCTGCCAGAAGATCACCGACATGATCAAG 17639346 Query 1592255 GGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||| ||||||||| | || || ||||||||| ||| Sbjct 17639347 GGCAAGTCGGTGGAGGAGATCAGGCGGAAGTTCAACATCAAGAACG 17639392 Score = 95.1 bits (104), Expect = 1e-13 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 1349430 GGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCT 1349489 ||||||| || |||| |||||||||| | || || |||||||||||||||||| | Sbjct 12101538 GGCGGCCGCGGCGCTCGCGTACCTGCACGCCGTGGAGCCCCCCATCGTGCACCGCGACGT 12101479 Query 1349490 CAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCCT 1349549 ||||| | |||| | || ||||| |||| | |||||||||| |||||||| || || Sbjct 12101478 CAAGACCACCAACATCCTCCTCGACGCCAACTTCCACGTCAAGGTCGCCGACTTCGGGCT 12101419 Query 1349550 GGCGCGC 1349556 | | ||| Sbjct 12101418 GTCCCGC 12101412 >seq1 Length=61571842 Score = 118 bits (130), Expect = 1e-20 Identities = 148/201 (74%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGT- 1254406 || || || ||| | | || |||||||| | ||||||||||||||| | | ||| || Sbjct 53559634 GCGAGCTCCCCGGGGAGGACGAGGCGCACCGAGGTCTGGATCTCGCGGGAGGTGATGGTC 53559575 Query 1254407 -GTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 ||| | ||||| | | || || | ||||||| | | ||| |||| |||| Sbjct 53559574 GGTTTC--TTGTTGTAACGGGCGAGCTTGGCGGCCTCCGCGGCGAGCTTCTCGAAGATGT 53559517 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||||| || |||||||||| ||||| | |||| ||||||||| | ||||||||||| Sbjct 53559516 CGTTGATGAAGGAGTTCATGATGGACATGGCCTTGGAGGAGATGCCGATGTCGGGGTGCA 53559457 Query 1254526 CCTGCTTGAGCACCTTGTAGA 1254546 |||||||||| |||||| ||| Sbjct 53559456 CCTGCTTGAGGACCTTGAAGA 53559436 >seq8 Length=47074253 Score = 109 bits (120), Expect = 7e-18 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || ||||||||| |||||||| ||||| || || ||| || |||| || || Sbjct 27849613 GCTGCAAACTACCTCAACATCAAGGGGCTGCTGGACCTGACCTGCCAGACTGTTGCTGAC 27849672 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 27849673 ATGATCAAGGGCAAGACTCCTGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 27849727 >seq2 Length=61504503 Score = 100 bits (110), Expect = 3e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || || || ||||| ||||||||| ||||| || || ||| || |||| || || Sbjct 51908003 GCTGCAAATTACCTGGACATCAAGGGGCTGCTGGACCTGACCTGCCAGACTGTCGCGGAC 51907944 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| ||| | || |||||||||||||||||||| ||||||||| ||| Sbjct 51907943 ATGATCAAGGGGAAGACTCCAGAGGAGATCCGCAAGACCTTCAACATCAAGAACG 51907889 Score = 96.9 bits (106), Expect = 4e-14 Identities = 123/169 (73%), Gaps = 3/169 (2%) Strand=Plus/Plus Query 1592135 GACAAGGAGTTTTGCGA---CGTCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCC 1592191 ||||||| ||| ||| || ||| ||| |||| || || || | | | |||||| Sbjct 56120876 GACAAGGCGTTCGTCGATATCGACGACCAGGCCACGCTGTTCGACCTCGTGATGGCCGCC 56120935 Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251 |||||||||||||||| | |||| || || ||| || | | ||| |||||||| Sbjct 56120936 AACTACCTCGACATCAGGGGGATGCTGGACCTCACCTGCCAGACGATCGCCGACATGATC 56120995 Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 |||||||||||| ||||||||| | |||| || ||||||||| ||| Sbjct 56120996 AAGGGCAAGTCGGTGGAGGAGATCAGGGAGACGTTCAACATCAAGAACG 56121044 Score = 95.1 bits (104), Expect = 1e-13 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 1592167 CCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGG 1592226 ||||| || | |||| ||||||||||| ||||||||||||| || ||||| | | Sbjct 58448551 CCTCTACGACGTCATCCACGCCGCCAACTTCCTCGACATCAAGGGGCTCCTCGACGTCGT 58448610 Query 1592227 GTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTT 1592286 | | || || ||| ||||||||||||||||| | ||||| ||||||||| ||||| Sbjct 58448611 CTACCAGAGGGTCGCCGACATGATCAAGGGCAAGACCCCCGAAGAGATCCGCGCCACCTT 58448670 Query 1592287 TAACATC 1592293 |||||| Sbjct 58448671 CAACATC 58448677 >seq1891 Length=4018 Score = 95.1 bits (104), Expect = 1e-13 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 1349430 GGCGGCCAAGGGCGTCGCCTACCTGCACGGTCTCGACCCGCCCATCGTGCACCGCGACCT 1349489 ||||||| || |||| |||||||||| | || || |||||||||||||||||| | Sbjct 3816 GGCGGCCGCGGCGCTCGCGTACCTGCACGCCGTGGAGCCCCCCATCGTGCACCGCGACGT 3757 Query 1349490 CAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAGGTGGCCGACTTTGGCCT 1349549 ||||| | |||| | || ||||| |||| | |||||||||| |||||||| || || Sbjct 3756 CAAGACCACCAACATCCTCCTCGACGCCAACTTCCACGTCAAGGTCGCCGACTTCGGGCT 3697 Query 1349550 GGCGCGC 1349556 | | ||| Sbjct 3696 GTCCCGC 3690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106467254375596