Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq4347 95.1 1e-14 >seq4347 Length=1781 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| || || || || ||||| ||||| ||| |||| |||| | | Sbjct 1012 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTCGAGGTGGAGTCCTCC 1071 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||| ||||| || ||| | ||| ||| || Sbjct 1072 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAG 1131 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || | || || | ||| || || ||||||||||||| | | || ||||||| |||||| Sbjct 1132 CAGCGTCTGATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAAC 1191 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || || || || || || | ||| ||||| | | ||||| || || Sbjct 1192 ATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGCCTGCGTGGTGG 1238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412800402020684