Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq9 91.5 2e-13 >seq9 Length=72259479 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/194 (72%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 192986 TCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCG-GGAATGGCCCAAAAAGGAA 193044 |||||| || ||||| |||| || || || ||| | || |||| | ||||||||| Sbjct 9930113 TCAGTT-CGCATACCACAAATTGGAGACAAGTTTAGCAGTAGGCATGGAC-AAAAAGGAA 9930056 Query 193045 CTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAG 193104 || ||| |||| ||| ||||||| || ||||||| |||| | ||| || ||| | Sbjct 9930055 CTGTTGGGATGACTTACACACAAGAGGACATGCCATGGACAATTGAAGGCATCACACCTG 9929996 Query 193105 ATATTATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTGCTA 193164 |||||||| | |||||| || |||||| ||| | ||||| ||| || | |||| Sbjct 9929995 ATATTATTGTGAATCCACATGCTATTCCATCCCGTATGACTATTGGACAGCTGATTGAGT 9929936 Query 193165 CTGTTATGGGTAAA 193178 | ||||||||||| Sbjct 9929935 GTATTATGGGTAAA 9929922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628466869831680